RNA–Protein interactions for RNA: ENST00000371118.1

ATG4C-202, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-202ENST00000371118 ABCC6O95255 1503 aa8.88□□□□□ -0.99
ATG4C-202ENST00000371118 CPSF1Q10570 1443 aaKnown RBP8.88□□□□□ -0.99
ATG4C-202ENST00000371118 COL18A1P39060 1754 aa8.87□□□□□ -0.99
ATG4C-202ENST00000371118 TMC2Q8TDI7 906 aa8.87□□□□□ -0.99
ATG4C-202ENST00000371118 CRISPLD2Q9H0B8 497 aa8.87□□□□□ -0.99
ATG4C-202ENST00000371118 PIK3C2AO00443 1686 aa8.87□□□□□ -0.99
ATG4C-202ENST00000371118 KCNH5Q8NCM2 988 aa8.86□□□□□ -0.99
ATG4C-202ENST00000371118 ARHGEF1Q92888 912 aaKnown RBP8.86□□□□□ -0.99
ATG4C-202ENST00000371118 DDX27Q96GQ7 796 aaKnown RBP8.86□□□□□ -0.99
ATG4C-202ENST00000371118 AK7Q96M32 723 aa8.86□□□□□ -0.99
ATG4C-202ENST00000371118 USP47Q96K76 1375 aa8.86□□□□□ -0.99
ATG4C-202ENST00000371118 PLEKHG2Q9H7P9 1386 aa8.86□□□□□ -0.99
ATG4C-202ENST00000371118 HOXB3P14651 431 aaPredicted RBP8.85□□□□□ -0.99
ATG4C-202ENST00000371118 MFSD10Q14728 455 aa8.85□□□□□ -0.99
ATG4C-202ENST00000371118 CABP1Q9NZU7 370 aa8.85□□□□□ -0.99
ATG4C-202ENST00000371118 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.84□□□□□ -0.99
ATG4C-202ENST00000371118 ADGRB1O14514 1584 aa8.84□□□□□ -0.99
ATG4C-202ENST00000371118 DPEP1P16444 411 aa8.84□□□□□ -0.99
ATG4C-202ENST00000371118 SLIT3O75094 1523 aa8.84□□□□□ -0.99
ATG4C-202ENST00000371118 CICQ96RK0 1608 aaPredicted RBP8.83□□□□□ -1
ATG4C-202ENST00000371118 MMP10P09238 476 aa8.83□□□□□ -1
ATG4C-202ENST00000371118 VEGFAP15692 232 aaPredicted RBP8.83□□□□□ -1
ATG4C-202ENST00000371118 AMIGO3Q86WK7 504 aa8.83□□□□□ -1
ATG4C-202ENST00000371118 ZNF710Q8N1W2 664 aa8.83□□□□□ -1
ATG4C-202ENST00000371118 MPHOSPH9Q99550 1183 aa8.83□□□□□ -1
ATG4C-202ENST00000371118 GPHNQ9NQX3 736 aaPredicted RBP8.83□□□□□ -1
ATG4C-202ENST00000371118 N4BP2Q86UW6 1770 aaPredicted RBP8.83□□□□□ -1
ATG4C-202ENST00000371118 ANKRD36BQ8N2N9 1353 aa8.83□□□□□ -1
ATG4C-202ENST00000371118 PXDNLA1KZ92 1463 aa8.83□□□□□ -1
ATG4C-202ENST00000371118 KIAA1210Q9ULL0 1709 aa8.83□□□□□ -1
ATG4C-202ENST00000371118 RGS19P49795 217 aa8.82□□□□□ -1
ATG4C-202ENST00000371118 TGFB2P61812 414 aa8.82□□□□□ -1
ATG4C-202ENST00000371118 VARS2Q5ST30 1063 aaKnown RBP8.82□□□□□ -1
ATG4C-202ENST00000371118 DCAF11Q8TEB1 546 aa8.82□□□□□ -1
ATG4C-202ENST00000371118 ANKRD24Q8TF21 1146 aa8.82□□□□□ -1
ATG4C-202ENST00000371118 LTV1Q96GA3 475 aaPredicted RBP8.82□□□□□ -1
ATG4C-202ENST00000371118 LY75O60449 1722 aa8.81□□□□□ -1
ATG4C-202ENST00000371118 ZNF687Q8N1G0 1237 aa8.81□□□□□ -1
ATG4C-202ENST00000371118 NSD2O96028 1365 aa8.81□□□□□ -1
ATG4C-202ENST00000371118 VEGFBP49765 207 aa8.8□□□□□ -1
ATG4C-202ENST00000371118 TNRC6CQ9HCJ0 1690 aaKnown RBP8.8□□□□□ -1
ATG4C-202ENST00000371118 DOT1LQ8TEK3 1739 aa8.8□□□□□ -1
ATG4C-202ENST00000371118 C10orf71Q711Q0 1435 aa8.8□□□□□ -1
ATG4C-202ENST00000371118 C5P01031 1676 aa8.79□□□□□ -1
ATG4C-202ENST00000371118 HSPA8P11142 646 aaKnown RBP8.79□□□□□ -1
ATG4C-202ENST00000371118 DALRD3Q5D0E6 543 aaKnown RBP8.79□□□□□ -1
ATG4C-202ENST00000371118 PPP1R15BQ5SWA1 713 aa8.79□□□□□ -1
ATG4C-202ENST00000371118 MPRIPQ6WCQ1 1025 aa8.79□□□□□ -1
ATG4C-202ENST00000371118 PKD1L3Q7Z443 1732 aa8.79□□□□□ -1
ATG4C-202ENST00000371118 TULP1O00294 542 aaPredicted RBP8.78□□□□□ -1
ATG4C-202ENST00000371118 ZCRB1Q8TBF4 217 aaKnown RBP8.78□□□□□ -1
ATG4C-202ENST00000371118 CCDC87Q9NVE4 849 aa8.78□□□□□ -1
ATG4C-202ENST00000371118 WBP1LQ9NX94 342 aa8.78□□□□□ -1
ATG4C-202ENST00000371118 PIM2Q9P1W9 311 aa8.78□□□□□ -1
ATG4C-202ENST00000371118 TTC21BQ7Z4L5 1316 aa8.78□□□□□ -1
ATG4C-202ENST00000371118 CNTNAP1P78357 1384 aa8.77□□□□□ -1.01
ATG4C-202ENST00000371118 PALLDQ8WX93 1383 aa8.77□□□□□ -1.01
ATG4C-202ENST00000371118 C2orf72A6NCS6 295 aa8.77□□□□□ -1.01
ATG4C-202ENST00000371118 GLTPD2A6NH11 291 aa8.77□□□□□ -1.01
ATG4C-202ENST00000371118 GNPATO15228 680 aa8.77□□□□□ -1.01
ATG4C-202ENST00000371118 HMGB2P26583 209 aaKnown RBP8.77□□□□□ -1.01
ATG4C-202ENST00000371118 RASSF7Q02833 373 aa8.77□□□□□ -1.01
ATG4C-202ENST00000371118 CAMK2BQ13554 666 aa8.77□□□□□ -1.01
ATG4C-202ENST00000371118 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.77□□□□□ -1.01
ATG4C-202ENST00000371118 USP54Q70EL1 1684 aa8.77□□□□□ -1.01
ATG4C-202ENST00000371118 PDE4DIPQ5VU43 2346 aa8.77□□□□□ -1.01
ATG4C-202ENST00000371118 TNRC18O15417 2968 aaPredicted RBP8.76□□□□□ -1.01
ATG4C-202ENST00000371118 SEMA3EO15041 775 aa8.76□□□□□ -1.01
ATG4C-202ENST00000371118 FOXK1P85037 733 aa8.76□□□□□ -1.01
ATG4C-202ENST00000371118 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.76□□□□□ -1.01
ATG4C-202ENST00000371118 C4BP0C0L5 1744 aa8.75□□□□□ -1.01
ATG4C-202ENST00000371118 KCNA3P22001 575 aa8.75□□□□□ -1.01
ATG4C-202ENST00000371118 SSFA2P28290 1259 aa8.75□□□□□ -1.01
ATG4C-202ENST00000371118 TMF1P82094 1093 aa8.75□□□□□ -1.01
ATG4C-202ENST00000371118 GRM1Q13255 1194 aa8.75□□□□□ -1.01
ATG4C-202ENST00000371118 DSG2Q14126 1118 aa8.75□□□□□ -1.01
ATG4C-202ENST00000371118 DOK7Q18PE1 504 aa8.75□□□□□ -1.01
ATG4C-202ENST00000371118 DCAF5Q96JK2 942 aa8.75□□□□□ -1.01
ATG4C-202ENST00000371118 TSKSQ9UJT2 592 aa8.75□□□□□ -1.01
ATG4C-202ENST00000371118 PARP3Q9Y6F1 533 aa8.75□□□□□ -1.01
ATG4C-202ENST00000371118 CHRNA5P30532 468 aa8.74□□□□□ -1.01
ATG4C-202ENST00000371118 LINC00116Q8NCU8 138 aa8.74□□□□□ -1.01
ATG4C-202ENST00000371118 BEGAINQ9BUH8 593 aa8.74□□□□□ -1.01
ATG4C-202ENST00000371118 ARIH1Q9Y4X5 557 aaPredicted RBP8.74□□□□□ -1.01
ATG4C-202ENST00000371118 NFAT5O94916 1531 aa8.74□□□□□ -1.01
ATG4C-202ENST00000371118 NSD3Q9BZ95 1437 aa8.73□□□□□ -1.01
ATG4C-202ENST00000371118 TESPA1A2RU30 521 aaPredicted RBP8.73□□□□□ -1.01
ATG4C-202ENST00000371118 POTECB2RU33 542 aa8.73□□□□□ -1.01
ATG4C-202ENST00000371118 LMNB1P20700 586 aa8.73□□□□□ -1.01
ATG4C-202ENST00000371118 MAP2K1Q02750 393 aaPredicted RBP8.73□□□□□ -1.01
ATG4C-202ENST00000371118 PLPP6Q8IY26 295 aa8.73□□□□□ -1.01
ATG4C-202ENST00000371118 NLGN1Q8N2Q7 840 aa8.73□□□□□ -1.01
ATG4C-202ENST00000371118 KIAA1551Q9HCM1 1747 aa8.73□□□□□ -1.01
ATG4C-202ENST00000371118 TAF1LQ8IZX4 1826 aa8.73□□□□□ -1.01
ATG4C-202ENST00000371118 QRICH2Q9H0J4 1663 aa8.72□□□□□ -1.01
ATG4C-202ENST00000371118 TOGARAM1Q9Y4F4 1720 aa8.72□□□□□ -1.01
ATG4C-202ENST00000371118 TMEM88BA6NKF7 163 aa8.72□□□□□ -1.01
ATG4C-202ENST00000371118 TRAPPC3LQ5T215 181 aa8.72□□□□□ -1.01
ATG4C-202ENST00000371118 SMARCC1Q92922 1105 aaPredicted RBP8.72□□□□□ -1.01
ATG4C-202ENST00000371118 MCOLN1Q9GZU1 580 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms