RNA–Protein interactions for RNA: ENST00000370817.3

COL21A1-202, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 3

Gene COL21A1, Length 624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-202ENST00000370817 USP32Q8NFA0 1604 aa11.75□□□□□ -0.53
COL21A1-202ENST00000370817 SMPD1P17405 629 aa11.75□□□□□ -0.53
COL21A1-202ENST00000370817 SIRT1Q96EB6 747 aa11.75□□□□□ -0.53
COL21A1-202ENST00000370817 NUDT12Q9BQG2 462 aa11.75□□□□□ -0.53
COL21A1-202ENST00000370817 MSH6P52701 1360 aa11.75□□□□□ -0.53
COL21A1-202ENST00000370817 GPRASP1Q5JY77 1395 aa11.75□□□□□ -0.53
COL21A1-202ENST00000370817 PLEKHH1Q9ULM0 1364 aa11.75□□□□□ -0.53
COL21A1-202ENST00000370817 AXIN1O15169 862 aa11.74□□□□□ -0.53
COL21A1-202ENST00000370817 CTC1Q2NKJ3 1217 aa11.74□□□□□ -0.53
COL21A1-202ENST00000370817 TONSLQ96HA7 1378 aa11.74□□□□□ -0.53
COL21A1-202ENST00000370817 MST1RQ04912 1400 aa11.74□□□□□ -0.53
COL21A1-202ENST00000370817 WNT7BP56706 349 aa11.73□□□□□ -0.53
COL21A1-202ENST00000370817 NBPF8Q3BBV2 869 aa11.73□□□□□ -0.53
COL21A1-202ENST00000370817 RC3H1Q5TC82 1133 aaKnown RBP11.73□□□□□ -0.53
COL21A1-202ENST00000370817 PTCRAQ6ISU1 281 aaPredicted RBP11.73□□□□□ -0.53
COL21A1-202ENST00000370817 PARP9Q8IXQ6 854 aa11.73□□□□□ -0.53
COL21A1-202ENST00000370817 BEGAINQ9BUH8 593 aa11.73□□□□□ -0.53
COL21A1-202ENST00000370817 TOPAZ1Q8N9V7 1692 aa11.72□□□□□ -0.53
COL21A1-202ENST00000370817 AHDC1Q5TGY3 1603 aaPredicted RBP11.72□□□□□ -0.53
COL21A1-202ENST00000370817 UBAP1LF5GYI3 381 aa11.72□□□□□ -0.53
COL21A1-202ENST00000370817 J3QL48 77 aa11.72□□□□□ -0.53
COL21A1-202ENST00000370817 SMCPP49901 116 aaPredicted RBP11.72□□□□□ -0.53
COL21A1-202ENST00000370817 NBPF1Q3BBV0 1214 aa11.72□□□□□ -0.53
COL21A1-202ENST00000370817 C19orf44Q9H6X5 657 aa11.72□□□□□ -0.53
COL21A1-202ENST00000370817 TRIM66O15016 1216 aa11.71□□□□□ -0.53
COL21A1-202ENST00000370817 TOM1O60784 492 aa11.71□□□□□ -0.53
COL21A1-202ENST00000370817 PHLPP1O60346 1717 aa11.71□□□□□ -0.54
COL21A1-202ENST00000370817 ITSN1Q15811 1721 aa11.71□□□□□ -0.54
COL21A1-202ENST00000370817 COL16A1Q07092 1604 aaPredicted RBP11.71□□□□□ -0.54
COL21A1-202ENST00000370817 MS4A1P11836 297 aa11.7□□□□□ -0.54
COL21A1-202ENST00000370817 WAPLQ7Z5K2 1190 aa11.7□□□□□ -0.54
COL21A1-202ENST00000370817 STK26Q9P289 416 aa11.7□□□□□ -0.54
COL21A1-202ENST00000370817 KIF1AQ12756 1690 aa11.69□□□□□ -0.54
COL21A1-202ENST00000370817 GMPR2Q9P2T1 348 aaKnown RBP11.69□□□□□ -0.54
COL21A1-202ENST00000370817 TIMELESSQ9UNS1 1208 aa11.69□□□□□ -0.54
COL21A1-202ENST00000370817 C1orf167Q5SNV9 1468 aa11.69□□□□□ -0.54
COL21A1-202ENST00000370817 CCNYL3P0C7X3 344 aa11.68□□□□□ -0.54
COL21A1-202ENST00000370817 TBC1D2Q9BYX2 928 aa11.68□□□□□ -0.54
COL21A1-202ENST00000370817 TULP4Q9NRJ4 1543 aa11.67□□□□□ -0.54
COL21A1-202ENST00000370817 PRR7Q8TB68 274 aa11.67□□□□□ -0.54
COL21A1-202ENST00000370817 AK7Q96M32 723 aa11.67□□□□□ -0.54
COL21A1-202ENST00000370817 PRAM1Q96QH2 718 aa11.67□□□□□ -0.54
COL21A1-202ENST00000370817 TRAK1Q9UPV9 953 aa11.67□□□□□ -0.54
COL21A1-202ENST00000370817 ROCK2O75116 1388 aaKnown RBP11.67□□□□□ -0.54
COL21A1-202ENST00000370817 SHPRHQ149N8 1683 aa11.66□□□□□ -0.54
COL21A1-202ENST00000370817 MTMR2Q13614 643 aa11.66□□□□□ -0.54
COL21A1-202ENST00000370817 PTPRNQ16849 979 aa11.66□□□□□ -0.54
COL21A1-202ENST00000370817 CCER1Q8TC90 406 aaPredicted RBP11.66□□□□□ -0.54
COL21A1-202ENST00000370817 HPS1Q92902 700 aa11.66□□□□□ -0.54
COL21A1-202ENST00000370817 SLAIN2Q9P270 581 aa11.66□□□□□ -0.54
COL21A1-202ENST00000370817 ATF3P18847 181 aa11.65□□□□□ -0.54
COL21A1-202ENST00000370817 RSBN1LQ6PCB5 846 aaPredicted RBP11.65□□□□□ -0.54
COL21A1-202ENST00000370817 ATP7BP35670 1465 aa11.64□□□□□ -0.55
COL21A1-202ENST00000370817 TRPM3Q9HCF6 1732 aaPredicted RBP11.64□□□□□ -0.55
COL21A1-202ENST00000370817 ANKARQ7Z5J8 1434 aa11.64□□□□□ -0.55
COL21A1-202ENST00000370817 PIP4K2BP78356 416 aa11.64□□□□□ -0.55
COL21A1-202ENST00000370817 C14orf37Q86TY3 774 aa11.64□□□□□ -0.55
COL21A1-202ENST00000370817 SBNO2Q9Y2G9 1366 aa11.64□□□□□ -0.55
COL21A1-202ENST00000370817 SPDYE5A6NIY4 337 aa11.63□□□□□ -0.55
COL21A1-202ENST00000370817 BRINP3Q76B58 766 aa11.63□□□□□ -0.55
COL21A1-202ENST00000370817 UNC93B1Q9H1C4 597 aa11.63□□□□□ -0.55
COL21A1-202ENST00000370817 EVA1BQ9NVM1 165 aa11.63□□□□□ -0.55
COL21A1-202ENST00000370817 AKAP12Q02952 1782 aa11.62□□□□□ -0.55
COL21A1-202ENST00000370817 COL22A1Q8NFW1 1626 aaPredicted RBP11.62□□□□□ -0.55
COL21A1-202ENST00000370817 C11orf95C9JLR9 678 aaPredicted RBP11.62□□□□□ -0.55
COL21A1-202ENST00000370817 SIAH2O43255 324 aa11.62□□□□□ -0.55
COL21A1-202ENST00000370817 ALDH1A1P00352 501 aa11.62□□□□□ -0.55
COL21A1-202ENST00000370817 GJA5P36382 358 aa11.62□□□□□ -0.55
COL21A1-202ENST00000370817 SH3BP2P78314 561 aa11.62□□□□□ -0.55
COL21A1-202ENST00000370817 DIXDC1Q155Q3 683 aa11.62□□□□□ -0.55
COL21A1-202ENST00000370817 DESI1Q6ICB0 168 aa11.62□□□□□ -0.55
COL21A1-202ENST00000370817 EHBP1Q8NDI1 1231 aa11.62□□□□□ -0.55
COL21A1-202ENST00000370817 PCDHB15Q9Y5E8 787 aa11.62□□□□□ -0.55
COL21A1-202ENST00000370817 GTF3C3Q9Y5Q9 886 aa11.62□□□□□ -0.55
COL21A1-202ENST00000370817 PXDNQ92626 1479 aa11.62□□□□□ -0.55
COL21A1-202ENST00000370817 HSPA1LP34931 641 aa11.61□□□□□ -0.55
COL21A1-202ENST00000370817 ATP13A2Q9NQ11 1180 aa11.61□□□□□ -0.55
COL21A1-202ENST00000370817 POGKQ9P215 609 aa11.61□□□□□ -0.55
COL21A1-202ENST00000370817 ALS2Q96Q42 1657 aa11.61□□□□□ -0.55
COL21A1-202ENST00000370817 PRR36Q9H6K5 1346 aa11.6□□□□□ -0.55
COL21A1-202ENST00000370817 CENPJQ9HC77 1338 aaPredicted RBP11.6□□□□□ -0.55
COL21A1-202ENST00000370817 CRYBG1Q9Y4K1 1723 aa11.6□□□□□ -0.55
COL21A1-202ENST00000370817 EIF3AQ14152 1382 aaKnown RBP11.6□□□□□ -0.55
COL21A1-202ENST00000370817 SPTLC1O15269 473 aa11.6□□□□□ -0.55
COL21A1-202ENST00000370817 KCNH2Q12809 1159 aa11.6□□□□□ -0.55
COL21A1-202ENST00000370817 SAFB2Q14151 953 aaKnown RBP eCLIP11.6□□□□□ -0.55
COL21A1-202ENST00000370817 ABCA3Q99758 1704 aa11.6□□□□□ -0.55
COL21A1-202ENST00000370817 WASLO00401 505 aaPredicted RBP11.59□□□□□ -0.55
COL21A1-202ENST00000370817 LINC01559Q495D7 138 aa11.59□□□□□ -0.55
COL21A1-202ENST00000370817 MARF1Q9Y4F3 1742 aaKnown RBP11.58□□□□□ -0.56
COL21A1-202ENST00000370817 CFAP99D6REC4 459 aa11.58□□□□□ -0.56
COL21A1-202ENST00000370817 PDE4DQ08499 809 aa11.58□□□□□ -0.56
COL21A1-202ENST00000370817 BAP1Q92560 729 aa11.58□□□□□ -0.56
COL21A1-202ENST00000370817 ORAI2Q96SN7 254 aa11.58□□□□□ -0.56
COL21A1-202ENST00000370817 HIRIP3Q9BW71 556 aaPredicted RBP11.58□□□□□ -0.56
COL21A1-202ENST00000370817 CARD11Q9BXL7 1154 aa11.58□□□□□ -0.56
COL21A1-202ENST00000370817 NRKQ7Z2Y5 1582 aa11.58□□□□□ -0.56
COL21A1-202ENST00000370817 MON2Q7Z3U7 1717 aa11.57□□□□□ -0.56
COL21A1-202ENST00000370817 MYOM1P52179 1685 aa11.57□□□□□ -0.56
COL21A1-202ENST00000370817 LCE2AQ5TA79 106 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms