RNA–Protein interactions for RNA: ENST00000370532.3

CDR1-201, Transcript of cerebellar degeneration related protein 1, humanhuman

APPRIS P1 BASIC

Gene CDR1, Length 2,467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-201ENST00000370532 SLC27A3Q5K4L6 730 aa5.66□□□□□ -1.5
CDR1-201ENST00000370532 DEFB132Q7Z7B7 95 aa5.66□□□□□ -1.5
CDR1-201ENST00000370532 WWC1Q8IX03 1113 aa5.66□□□□□ -1.5
CDR1-201ENST00000370532 BCCIPQ9P287 314 aaKnown RBP eCLIP5.66□□□□□ -1.5
CDR1-201ENST00000370532 ZBED9Q6R2W3 1325 aa5.66□□□□□ -1.5
CDR1-201ENST00000370532 GOLGA6L3A6NEY3 463 aa5.66□□□□□ -1.5
CDR1-201ENST00000370532 SEMA3EO15041 775 aa5.66□□□□□ -1.5
CDR1-201ENST00000370532 KCNQ2O43526 872 aa5.66□□□□□ -1.5
CDR1-201ENST00000370532 APBA3O96018 575 aa5.66□□□□□ -1.5
CDR1-201ENST00000370532 IP6K1Q92551 441 aa5.66□□□□□ -1.5
CDR1-201ENST00000370532 MAP7D2Q96T17 732 aa5.66□□□□□ -1.5
CDR1-201ENST00000370532 SPON1Q9HCB6 807 aa5.66□□□□□ -1.5
CDR1-201ENST00000370532 ERBB3P21860 1342 aa5.66□□□□□ -1.5
CDR1-201ENST00000370532 ZC3H6P61129 1189 aaKnown RBP5.65□□□□□ -1.5
CDR1-201ENST00000370532 EN1Q05925 392 aaPredicted RBP5.65□□□□□ -1.5
CDR1-201ENST00000370532 FAM9BQ8IZU0 186 aa5.65□□□□□ -1.5
CDR1-201ENST00000370532 CHMP4CQ96CF2 233 aa5.65□□□□□ -1.5
CDR1-201ENST00000370532 MYOM1P52179 1685 aa5.65□□□□□ -1.5
CDR1-201ENST00000370532 CHD4Q14839 1912 aa5.65□□□□□ -1.5
CDR1-201ENST00000370532 SMG6Q86US8 1419 aaKnown RBP5.65□□□□□ -1.51
CDR1-201ENST00000370532 A0A0G2JS52 829 aa5.65□□□□□ -1.51
CDR1-201ENST00000370532 EXOC5O00471 708 aa5.65□□□□□ -1.51
CDR1-201ENST00000370532 MS4A1P11836 297 aa5.65□□□□□ -1.51
CDR1-201ENST00000370532 TOM1L2Q6ZVM7 507 aa5.65□□□□□ -1.51
CDR1-201ENST00000370532 NGEFQ8N5V2 710 aa5.65□□□□□ -1.51
CDR1-201ENST00000370532 TMC1Q8TDI8 760 aa5.65□□□□□ -1.51
CDR1-201ENST00000370532 STRN4Q9NRL3 753 aa5.65□□□□□ -1.51
CDR1-201ENST00000370532 A0A1W2PP64 1363 aa5.64□□□□□ -1.51
CDR1-201ENST00000370532 IL2RBP14784 551 aa5.64□□□□□ -1.51
CDR1-201ENST00000370532 CHRNA2Q15822 529 aa5.64□□□□□ -1.51
CDR1-201ENST00000370532 EZH2Q15910 746 aaKnown RBP5.64□□□□□ -1.51
CDR1-201ENST00000370532 ZBTB9Q96C00 473 aa5.64□□□□□ -1.51
CDR1-201ENST00000370532 TMEM106CQ9BVX2 250 aa5.64□□□□□ -1.51
CDR1-201ENST00000370532 TRIM37O94972 964 aa5.64□□□□□ -1.51
CDR1-201ENST00000370532 KIF20AO95235 890 aa5.64□□□□□ -1.51
CDR1-201ENST00000370532 DNTTIP2Q5QJE6 756 aaKnown RBP5.64□□□□□ -1.51
CDR1-201ENST00000370532 TMED8Q6PL24 325 aaPredicted RBP5.64□□□□□ -1.51
CDR1-201ENST00000370532 AEBP1Q8IUX7 1158 aa5.64□□□□□ -1.51
CDR1-201ENST00000370532 STK32BQ9NY57 414 aa5.64□□□□□ -1.51
CDR1-201ENST00000370532 DOT1LQ8TEK3 1739 aa5.64□□□□□ -1.51
CDR1-201ENST00000370532 INSRP06213 1382 aa5.63□□□□□ -1.51
CDR1-201ENST00000370532 CDK11BP21127 795 aaKnown RBP5.63□□□□□ -1.51
CDR1-201ENST00000370532 GZF1Q9H116 711 aaPredicted RBP5.63□□□□□ -1.51
CDR1-201ENST00000370532 IRX5P78411 483 aaPredicted RBP5.63□□□□□ -1.51
CDR1-201ENST00000370532 MARCH10Q8NA82 808 aaPredicted RBP5.63□□□□□ -1.51
CDR1-201ENST00000370532 FLAD1Q8NFF5 587 aa5.63□□□□□ -1.51
CDR1-201ENST00000370532 MTFR1LQ9H019 292 aa5.63□□□□□ -1.51
CDR1-201ENST00000370532 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.63□□□□□ -1.51
CDR1-201ENST00000370532 CGNQ9P2M7 1197 aaKnown RBP5.63□□□□□ -1.51
CDR1-201ENST00000370532 TAF1LQ8IZX4 1826 aa5.63□□□□□ -1.51
CDR1-201ENST00000370532 C5P01031 1676 aa5.62□□□□□ -1.51
CDR1-201ENST00000370532 TUBGCP6Q96RT7 1819 aa5.62□□□□□ -1.51
CDR1-201ENST00000370532 SOX12O15370 315 aa5.62□□□□□ -1.51
CDR1-201ENST00000370532 OFD1O75665 1012 aa5.62□□□□□ -1.51
CDR1-201ENST00000370532 EXOC6Q8TAG9 804 aa5.62□□□□□ -1.51
CDR1-201ENST00000370532 FLT4P35916 1363 aa5.62□□□□□ -1.51
CDR1-201ENST00000370532 MAP3K19Q56UN5 1328 aa5.62□□□□□ -1.51
CDR1-201ENST00000370532 SENP3-EIF4A1A0A087X0R7 540 aa5.62□□□□□ -1.51
CDR1-201ENST00000370532 TTLL13PA6NNM8 815 aa5.62□□□□□ -1.51
CDR1-201ENST00000370532 TNNT2P45379 298 aaPredicted RBP5.62□□□□□ -1.51
CDR1-201ENST00000370532 R3HDM1Q15032 1099 aaKnown RBP5.62□□□□□ -1.51
CDR1-201ENST00000370532 COG3Q96JB2 828 aa5.62□□□□□ -1.51
CDR1-201ENST00000370532 CCDC94Q9BW85 323 aaPredicted RBP5.62□□□□□ -1.51
CDR1-201ENST00000370532 R3HCC1Q9Y3T6 440 aaKnown RBP5.62□□□□□ -1.51
CDR1-201ENST00000370532 UQCRHLA0A096LP55 91 aa5.61□□□□□ -1.51
CDR1-201ENST00000370532 LETM1O95202 739 aaPredicted RBP5.61□□□□□ -1.51
CDR1-201ENST00000370532 UQCRHP07919 91 aa5.61□□□□□ -1.51
CDR1-201ENST00000370532 MMP14P50281 582 aa5.61□□□□□ -1.51
CDR1-201ENST00000370532 SLC15A2Q16348 729 aa5.61□□□□□ -1.51
CDR1-201ENST00000370532 GTPBP4Q9BZE4 634 aaKnown RBP5.61□□□□□ -1.51
CDR1-201ENST00000370532 MYH16Q9H6N6 1097 aa5.61□□□□□ -1.51
CDR1-201ENST00000370532 BMP2KQ9NSY1 1161 aaPredicted RBP5.61□□□□□ -1.51
CDR1-201ENST00000370532 HDAC5Q9UQL6 1122 aa5.61□□□□□ -1.51
CDR1-201ENST00000370532 CSB-PGBD3P0DP91 1061 aa5.6□□□□□ -1.51
CDR1-201ENST00000370532 TXNRD1Q16881 649 aa5.6□□□□□ -1.51
CDR1-201ENST00000370532 ANKRD24Q8TF21 1146 aa5.6□□□□□ -1.51
CDR1-201ENST00000370532 LARP6Q9BRS8 491 aaKnown RBP5.6□□□□□ -1.51
CDR1-201ENST00000370532 PANK3Q9H999 370 aa5.6□□□□□ -1.51
CDR1-201ENST00000370532 NUDCQ9Y266 331 aa5.6□□□□□ -1.51
CDR1-201ENST00000370532 AXIN2Q9Y2T1 843 aa5.6□□□□□ -1.51
CDR1-201ENST00000370532 KIF13BQ9NQT8 1826 aa5.6□□□□□ -1.51
CDR1-201ENST00000370532 C19orf67A6NJJ6 358 aa5.6□□□□□ -1.51
CDR1-201ENST00000370532 PER1O15534 1290 aaPredicted RBP5.6□□□□□ -1.51
CDR1-201ENST00000370532 CBX1P83916 185 aa5.6□□□□□ -1.51
CDR1-201ENST00000370532 SMARCC1Q92922 1105 aaPredicted RBP5.6□□□□□ -1.51
CDR1-201ENST00000370532 KAT6BQ8WYB5 2073 aa5.6□□□□□ -1.51
CDR1-201ENST00000370532 ITGB4P16144 1822 aa5.6□□□□□ -1.51
CDR1-201ENST00000370532 IGSF3O75054 1194 aa5.59□□□□□ -1.51
CDR1-201ENST00000370532 HOXC9P31274 260 aa5.59□□□□□ -1.51
CDR1-201ENST00000370532 MRE11P49959 708 aa5.59□□□□□ -1.51
CDR1-201ENST00000370532 TERF1P54274 439 aa5.59□□□□□ -1.51
CDR1-201ENST00000370532 SLC12A5Q9H2X9 1139 aa5.59□□□□□ -1.51
CDR1-201ENST00000370532 GRPEL1Q9HAV7 217 aa5.59□□□□□ -1.51
CDR1-201ENST00000370532 MAP2P11137 1827 aaKnown RBP5.59□□□□□ -1.51
CDR1-201ENST00000370532 PCDH11XQ9BZA7 1347 aa5.59□□□□□ -1.51
CDR1-201ENST00000370532 PCDH11YQ9BZA8 1340 aa5.59□□□□□ -1.51
CDR1-201ENST00000370532 RGPD2P0DJD1 1756 aa5.59□□□□□ -1.51
CDR1-201ENST00000370532 NUTM2GQ5VZR2 741 aa5.59□□□□□ -1.51
CDR1-201ENST00000370532 TRIM44Q96DX7 344 aaPredicted RBP5.59□□□□□ -1.51
CDR1-201ENST00000370532 SLKQ9H2G2 1235 aaPredicted RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms