RNA–Protein interactions for RNA: ENST00000370096.7

COL11A1-203, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene COL11A1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-203ENST00000370096 TNIP1Q15025 636 aa12.84□□□□□ -0.35
COL11A1-203ENST00000370096 CEP112Q8N8E3 955 aa12.84□□□□□ -0.35
COL11A1-203ENST00000370096 CCDC12Q8WUD4 166 aaPredicted RBP12.84□□□□□ -0.35
COL11A1-203ENST00000370096 NAA15Q9BXJ9 866 aaKnown RBP12.84□□□□□ -0.35
COL11A1-203ENST00000370096 POLR3DP05423 398 aaPredicted RBP12.83□□□□□ -0.35
COL11A1-203ENST00000370096 BOLA2Q9H3K6 86 aa12.83□□□□□ -0.35
COL11A1-203ENST00000370096 BTBD11A6QL63 1104 aa12.83□□□□□ -0.36
COL11A1-203ENST00000370096 SLC4A8Q2Y0W8 1093 aa12.83□□□□□ -0.36
COL11A1-203ENST00000370096 TCERG1LQ5VWI1 586 aa12.83□□□□□ -0.36
COL11A1-203ENST00000370096 HYPKQ9NX55 129 aa12.83□□□□□ -0.36
COL11A1-203ENST00000370096 TFIP11Q9UBB9 837 aaKnown RBP12.83□□□□□ -0.36
COL11A1-203ENST00000370096 FSIP1Q8NA03 581 aa12.83□□□□□ -0.36
COL11A1-203ENST00000370096 KAT6BQ8WYB5 2073 aa12.83□□□□□ -0.36
COL11A1-203ENST00000370096 PRC1O43663 620 aa12.83□□□□□ -0.36
COL11A1-203ENST00000370096 PPP4R3AQ6IN85 833 aa12.83□□□□□ -0.36
COL11A1-203ENST00000370096 ARL1P40616 181 aaPredicted RBP12.83□□□□□ -0.36
COL11A1-203ENST00000370096 CLGNO14967 610 aa12.82□□□□□ -0.36
COL11A1-203ENST00000370096 HSPA4P34932 840 aa12.82□□□□□ -0.36
COL11A1-203ENST00000370096 MKNK2Q9HBH9 465 aa12.82□□□□□ -0.36
COL11A1-203ENST00000370096 TMEM57Q8N5G2 664 aa12.82□□□□□ -0.36
COL11A1-203ENST00000370096 CEP126Q9P2H0 1117 aa12.82□□□□□ -0.36
COL11A1-203ENST00000370096 MICALL1Q8N3F8 863 aa12.82□□□□□ -0.36
COL11A1-203ENST00000370096 BAZ1AQ9NRL2 1556 aaPredicted RBP12.82□□□□□ -0.36
COL11A1-203ENST00000370096 NUTM2BA6NNL0 878 aaPredicted RBP12.82□□□□□ -0.36
COL11A1-203ENST00000370096 NUTM2EB1AL46 878 aaPredicted RBP12.82□□□□□ -0.36
COL11A1-203ENST00000370096 NUTM2AQ8IVF1 878 aaPredicted RBP12.82□□□□□ -0.36
COL11A1-203ENST00000370096 HSP90AA4PQ58FG1 418 aa12.82□□□□□ -0.36
COL11A1-203ENST00000370096 RAPGEF2Q9Y4G8 1499 aa12.82□□□□□ -0.36
COL11A1-203ENST00000370096 MSL1Q68DK7 614 aa12.81□□□□□ -0.36
COL11A1-203ENST00000370096 CECR2Q9BXF3 1484 aa12.81□□□□□ -0.36
COL11A1-203ENST00000370096 TNPO1Q92973 898 aaKnown RBP12.81□□□□□ -0.36
COL11A1-203ENST00000370096 TSNARE1Q96NA8 513 aa12.81□□□□□ -0.36
COL11A1-203ENST00000370096 NAP1L3Q99457 506 aaPredicted RBP12.81□□□□□ -0.36
COL11A1-203ENST00000370096 POTEB2H3BUK9 544 aa12.81□□□□□ -0.36
COL11A1-203ENST00000370096 RANBP6O60518 1105 aaKnown RBP12.81□□□□□ -0.36
COL11A1-203ENST00000370096 SSRP1Q08945 709 aaKnown RBP12.81□□□□□ -0.36
COL11A1-203ENST00000370096 RAB11FIP4Q86YS3 637 aa12.81□□□□□ -0.36
COL11A1-203ENST00000370096 RGS22Q8NE09 1264 aa12.81□□□□□ -0.36
COL11A1-203ENST00000370096 FGFR1OPO95684 399 aaKnown RBP12.81□□□□□ -0.36
COL11A1-203ENST00000370096 ZWINTO95229 277 aa12.81□□□□□ -0.36
COL11A1-203ENST00000370096 GNG11P61952 73 aa12.81□□□□□ -0.36
COL11A1-203ENST00000370096 CEP57Q86XR8 500 aa12.81□□□□□ -0.36
COL11A1-203ENST00000370096 NLRP5P59047 1200 aa12.81□□□□□ -0.36
COL11A1-203ENST00000370096 CCDC40Q4G0X9 1142 aa12.81□□□□□ -0.36
COL11A1-203ENST00000370096 METTL24Q5JXM2 366 aa12.81□□□□□ -0.36
COL11A1-203ENST00000370096 WDR78Q5VTH9 848 aa12.81□□□□□ -0.36
COL11A1-203ENST00000370096 TOM1L2Q6ZVM7 507 aa12.81□□□□□ -0.36
COL11A1-203ENST00000370096 IKBKGQ9Y6K9 419 aa12.81□□□□□ -0.36
COL11A1-203ENST00000370096 ZNF530Q6P9A1 599 aaPredicted RBP12.8□□□□□ -0.36
COL11A1-203ENST00000370096 MCM6Q14566 821 aa12.8□□□□□ -0.36
COL11A1-203ENST00000370096 BBXQ8WY36 941 aaPredicted RBP12.8□□□□□ -0.36
COL11A1-203ENST00000370096 RRBP1Q9P2E9 1410 aaKnown RBP12.8□□□□□ -0.36
COL11A1-203ENST00000370096 PSMC4P43686 418 aa12.8□□□□□ -0.36
COL11A1-203ENST00000370096 GPRASP1Q5JY77 1395 aa12.8□□□□□ -0.36
COL11A1-203ENST00000370096 TMCO4Q5TGY1 634 aa12.8□□□□□ -0.36
COL11A1-203ENST00000370096 CRACR2BQ8N4Y2 399 aaPredicted RBP12.8□□□□□ -0.36
COL11A1-203ENST00000370096 DNAI2Q9GZS0 605 aa12.8□□□□□ -0.36
COL11A1-203ENST00000370096 U3KPZ7 1027 aaPredicted RBP12.8□□□□□ -0.36
COL11A1-203ENST00000370096 RAD54L2Q9Y4B4 1467 aa12.79□□□□□ -0.36
COL11A1-203ENST00000370096 RRS1Q15050 365 aaKnown RBP12.79□□□□□ -0.36
COL11A1-203ENST00000370096 SLC12A7Q9Y666 1083 aa12.79□□□□□ -0.36
COL11A1-203ENST00000370096 MRPS9P82933 396 aaKnown RBP12.79□□□□□ -0.36
COL11A1-203ENST00000370096 STX1AQ16623 288 aa12.79□□□□□ -0.36
COL11A1-203ENST00000370096 ATRIPQ8WXE1 791 aa12.79□□□□□ -0.36
COL11A1-203ENST00000370096 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.79□□□□□ -0.36
COL11A1-203ENST00000370096 V9GYY5 206 aaPredicted RBP12.79□□□□□ -0.36
COL11A1-203ENST00000370096 GJB2P29033 226 aa12.79□□□□□ -0.36
COL11A1-203ENST00000370096 IGHMBP2P38935 993 aaKnown RBP12.79□□□□□ -0.36
COL11A1-203ENST00000370096 SMIM23A6NLE4 172 aa12.79□□□□□ -0.36
COL11A1-203ENST00000370096 SELENOSQ9BQE4 189 aa12.79□□□□□ -0.36
COL11A1-203ENST00000370096 JPH4Q96JJ6 628 aa12.78□□□□□ -0.36
COL11A1-203ENST00000370096 PRAM1Q96QH2 718 aa12.78□□□□□ -0.36
COL11A1-203ENST00000370096 VAT1LQ9HCJ6 419 aa12.78□□□□□ -0.36
COL11A1-203ENST00000370096 KIF4AO95239 1232 aa12.78□□□□□ -0.36
COL11A1-203ENST00000370096 TMEM266Q2M3C6 531 aa12.78□□□□□ -0.36
COL11A1-203ENST00000370096 CYB5RLQ6IPT4 315 aa12.78□□□□□ -0.36
COL11A1-203ENST00000370096 WDR70Q9NW82 654 aa12.78□□□□□ -0.36
COL11A1-203ENST00000370096 ZNF354CQ86Y25 554 aa12.78□□□□□ -0.36
COL11A1-203ENST00000370096 CCDC155Q8N6L0 562 aa12.78□□□□□ -0.36
COL11A1-203ENST00000370096 SCAND2PQ9GZW5 306 aaPredicted RBP12.78□□□□□ -0.36
COL11A1-203ENST00000370096 TMEM110-MUSTN1A8MSY1 372 aa12.78□□□□□ -0.36
COL11A1-203ENST00000370096 NAPBQ9H115 298 aa12.78□□□□□ -0.36
COL11A1-203ENST00000370096 PABPN1LA6NDY0 278 aaKnown RBP12.78□□□□□ -0.36
COL11A1-203ENST00000370096 CFAP70Q5T0N1 1121 aa12.78□□□□□ -0.36
COL11A1-203ENST00000370096 CFAP58Q5T655 872 aa12.78□□□□□ -0.36
COL11A1-203ENST00000370096 SYCP3Q8IZU3 236 aa12.78□□□□□ -0.36
COL11A1-203ENST00000370096 CCDC63Q8NA47 563 aa12.78□□□□□ -0.36
COL11A1-203ENST00000370096 IGSF3O75054 1194 aa12.77□□□□□ -0.36
COL11A1-203ENST00000370096 CCDC8Q9H0W5 538 aaPredicted RBP12.77□□□□□ -0.36
COL11A1-203ENST00000370096 GOLGA8BA8MQT2 603 aa12.77□□□□□ -0.36
COL11A1-203ENST00000370096 GSDMDP57764 484 aa12.77□□□□□ -0.36
COL11A1-203ENST00000370096 MX1P20591 662 aa12.77□□□□□ -0.37
COL11A1-203ENST00000370096 KIAA0753Q2KHM9 967 aa12.77□□□□□ -0.37
COL11A1-203ENST00000370096 DNAJC21Q5F1R6 531 aaKnown RBP12.77□□□□□ -0.37
COL11A1-203ENST00000370096 SLC12A5Q9H2X9 1139 aa12.77□□□□□ -0.37
COL11A1-203ENST00000370096 ZNF644Q9H582 1327 aaPredicted RBP12.77□□□□□ -0.37
COL11A1-203ENST00000370096 RAB11FIP3O75154 756 aa12.77□□□□□ -0.37
COL11A1-203ENST00000370096 IDEP14735 1019 aa12.77□□□□□ -0.37
COL11A1-203ENST00000370096 GIMAP6Q6P9H5 292 aa12.77□□□□□ -0.37
COL11A1-203ENST00000370096 TXNDC2Q86VQ3 553 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms