RNA–Protein interactions for RNA: ENST00000369717.8

TMIGD3-202, Transcript of transmembrane and immunoglobulin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene TMIGD3, Length 1,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3-202ENST00000369717 MCM10Q7L590 875 aa13.23□□□□□ -0.29
TMIGD3-202ENST00000369717 ZBTB1Q9Y2K1 713 aa13.23□□□□□ -0.29
TMIGD3-202ENST00000369717 NEFMP07197 916 aa13.22□□□□□ -0.29
TMIGD3-202ENST00000369717 IL6STP40189 918 aaPredicted RBP13.22□□□□□ -0.29
TMIGD3-202ENST00000369717 MAPK8IP2Q13387 824 aaPredicted RBP13.22□□□□□ -0.29
TMIGD3-202ENST00000369717 PNISRQ8TF01 805 aaKnown RBP13.22□□□□□ -0.29
TMIGD3-202ENST00000369717 BABAM1Q9NWV8 329 aa13.22□□□□□ -0.29
TMIGD3-202ENST00000369717 KCNQ3O43525 872 aa13.21□□□□□ -0.29
TMIGD3-202ENST00000369717 SNRPA1P09661 255 aaKnown RBP13.21□□□□□ -0.29
TMIGD3-202ENST00000369717 FKBP8Q14318 412 aa13.21□□□□□ -0.29
TMIGD3-202ENST00000369717 PPP4R3CPQ6ZMV5 832 aa13.21□□□□□ -0.29
TMIGD3-202ENST00000369717 C10orf71Q711Q0 1435 aa13.21□□□□□ -0.3
TMIGD3-202ENST00000369717 A0A087WZG4 1122 aa13.2□□□□□ -0.3
TMIGD3-202ENST00000369717 ZPR1O75312 459 aa13.2□□□□□ -0.3
TMIGD3-202ENST00000369717 YY1P25490 414 aa13.2□□□□□ -0.3
TMIGD3-202ENST00000369717 DCTN1Q14203 1278 aa13.2□□□□□ -0.3
TMIGD3-202ENST00000369717 GPR162Q16538 588 aa13.2□□□□□ -0.3
TMIGD3-202ENST00000369717 BCL2L12Q9HB09 334 aa13.2□□□□□ -0.3
TMIGD3-202ENST00000369717 SRP68Q9UHB9 627 aaKnown RBP13.2□□□□□ -0.3
TMIGD3-202ENST00000369717 COL15A1P39059 1388 aa13.2□□□□□ -0.3
TMIGD3-202ENST00000369717 POLRMTO00411 1230 aaKnown RBP13.19□□□□□ -0.3
TMIGD3-202ENST00000369717 YBX3P16989 372 aaKnown RBP eCLIP13.19□□□□□ -0.3
TMIGD3-202ENST00000369717 DDR1Q08345 913 aa13.19□□□□□ -0.3
TMIGD3-202ENST00000369717 USP16Q9Y5T5 823 aa13.19□□□□□ -0.3
TMIGD3-202ENST00000369717 PARP3Q9Y6F1 533 aa13.19□□□□□ -0.3
TMIGD3-202ENST00000369717 TMPOP42166 694 aaKnown RBP13.18□□□□□ -0.3
TMIGD3-202ENST00000369717 USPL1Q5W0Q7 1092 aa13.18□□□□□ -0.3
TMIGD3-202ENST00000369717 VIRMAQ69YN4 1812 aaKnown RBP13.18□□□□□ -0.3
TMIGD3-202ENST00000369717 MAPK8IP3Q9UPT6 1336 aa13.17□□□□□ -0.3
TMIGD3-202ENST00000369717 GIGYF1O75420 1035 aaPredicted RBP13.17□□□□□ -0.3
TMIGD3-202ENST00000369717 A1BGP04217 495 aa13.17□□□□□ -0.3
TMIGD3-202ENST00000369717 KCNA3P22001 575 aa13.17□□□□□ -0.3
TMIGD3-202ENST00000369717 EIF4A1P60842 406 aaKnown RBP13.17□□□□□ -0.3
TMIGD3-202ENST00000369717 NFIXQ14938 502 aa13.17□□□□□ -0.3
TMIGD3-202ENST00000369717 ADAMTS8Q9UP79 889 aa13.17□□□□□ -0.3
TMIGD3-202ENST00000369717 PXDNLA1KZ92 1463 aa13.16□□□□□ -0.3
TMIGD3-202ENST00000369717 C4AP0C0L4 1744 aa13.16□□□□□ -0.3
TMIGD3-202ENST00000369717 KIF13BQ9NQT8 1826 aa13.16□□□□□ -0.3
TMIGD3-202ENST00000369717 CANXP27824 592 aaKnown RBP13.16□□□□□ -0.3
TMIGD3-202ENST00000369717 RIPK4P57078 832 aa13.16□□□□□ -0.3
TMIGD3-202ENST00000369717 LMOD3Q0VAK6 560 aa13.16□□□□□ -0.3
TMIGD3-202ENST00000369717 CLEC4GQ6UXB4 293 aa13.16□□□□□ -0.3
TMIGD3-202ENST00000369717 KLHL34Q8N239 644 aa13.16□□□□□ -0.3
TMIGD3-202ENST00000369717 RUNDC1Q96C34 613 aa13.16□□□□□ -0.3
TMIGD3-202ENST00000369717 CAMTA2O94983 1202 aa13.15□□□□□ -0.3
TMIGD3-202ENST00000369717 PRAMEF22A3QJZ6 481 aa13.14□□□□□ -0.31
TMIGD3-202ENST00000369717 ZNF316A6NFI3 1004 aaPredicted RBP13.14□□□□□ -0.31
TMIGD3-202ENST00000369717 NBPF26B4DH59 902 aa13.14□□□□□ -0.31
TMIGD3-202ENST00000369717 NBPF10Q6P3W6 841 aaKnown RBP13.14□□□□□ -0.31
TMIGD3-202ENST00000369717 NBPF15Q8N660 670 aa13.14□□□□□ -0.31
TMIGD3-202ENST00000369717 TRIM35Q9UPQ4 493 aa13.14□□□□□ -0.31
TMIGD3-202ENST00000369717 CHL1O00533 1208 aa13.13□□□□□ -0.31
TMIGD3-202ENST00000369717 NCBP3Q53F19 620 aaKnown RBP13.13□□□□□ -0.31
TMIGD3-202ENST00000369717 MIS18AQ9NYP9 233 aa13.13□□□□□ -0.31
TMIGD3-202ENST00000369717 ERBB4Q15303 1308 aa13.13□□□□□ -0.31
TMIGD3-202ENST00000369717 A0A0G2JLW4 131 aa13.12□□□□□ -0.31
TMIGD3-202ENST00000369717 SERPINB2P05120 415 aa13.12□□□□□ -0.31
TMIGD3-202ENST00000369717 DPEP1P16444 411 aa13.12□□□□□ -0.31
TMIGD3-202ENST00000369717 WDR43Q15061 677 aaKnown RBP eCLIP13.12□□□□□ -0.31
TMIGD3-202ENST00000369717 ZNF784Q8NCA9 323 aaPredicted RBP13.12□□□□□ -0.31
TMIGD3-202ENST00000369717 THUMPD2Q9BTF0 503 aaKnown RBP13.12□□□□□ -0.31
TMIGD3-202ENST00000369717 PDZRN3Q9UPQ7 1066 aa13.12□□□□□ -0.31
TMIGD3-202ENST00000369717 TBC1D2BQ9UPU7 963 aa13.12□□□□□ -0.31
TMIGD3-202ENST00000369717 KIAA1551Q9HCM1 1747 aa13.12□□□□□ -0.31
TMIGD3-202ENST00000369717 NRXN2Q9P2S2 1712 aa13.11□□□□□ -0.31
TMIGD3-202ENST00000369717 PIM2Q9P1W9 311 aa13.11□□□□□ -0.31
TMIGD3-202ENST00000369717 ERVV-1B6SEH8 477 aa13.1□□□□□ -0.31
TMIGD3-202ENST00000369717 TBC1D9BQ66K14 1250 aa13.1□□□□□ -0.31
TMIGD3-202ENST00000369717 LRP10Q7Z4F1 713 aa13.1□□□□□ -0.31
TMIGD3-202ENST00000369717 DZIP3Q86Y13 1208 aaKnown RBP13.1□□□□□ -0.31
TMIGD3-202ENST00000369717 BRIP1Q9BX63 1249 aa13.1□□□□□ -0.31
TMIGD3-202ENST00000369717 CHD4Q14839 1912 aa13.09□□□□□ -0.31
TMIGD3-202ENST00000369717 ADCY9O60503 1353 aa13.09□□□□□ -0.31
TMIGD3-202ENST00000369717 CARMIL3Q8ND23 1372 aa13.09□□□□□ -0.31
TMIGD3-202ENST00000369717 KLRG2A4D1S0 409 aaPredicted RBP13.09□□□□□ -0.31
TMIGD3-202ENST00000369717 ZNF853P0CG23 659 aa13.09□□□□□ -0.31
TMIGD3-202ENST00000369717 NPM2Q86SE8 214 aaKnown RBP13.09□□□□□ -0.31
TMIGD3-202ENST00000369717 DLG5Q8TDM6 1919 aa13.09□□□□□ -0.31
TMIGD3-202ENST00000369717 KDM3BQ7LBC6 1761 aa13.09□□□□□ -0.31
TMIGD3-202ENST00000369717 HOXB7P09629 217 aa13.08□□□□□ -0.32
TMIGD3-202ENST00000369717 PDIA6Q15084 440 aa13.08□□□□□ -0.32
TMIGD3-202ENST00000369717 PELP1Q8IZL8 1130 aaKnown RBP13.08□□□□□ -0.32
TMIGD3-202ENST00000369717 CFAP44Q96MT7 982 aa13.08□□□□□ -0.32
TMIGD3-202ENST00000369717 SETDB2Q96T68 719 aa13.08□□□□□ -0.32
TMIGD3-202ENST00000369717 TSPYL4Q9UJ04 414 aa13.08□□□□□ -0.32
TMIGD3-202ENST00000369717 ZNF652Q9Y2D9 606 aa13.08□□□□□ -0.32
TMIGD3-202ENST00000369717 DALRD3Q5D0E6 543 aaKnown RBP13.07□□□□□ -0.32
TMIGD3-202ENST00000369717 PRR5LQ6MZQ0 368 aa13.07□□□□□ -0.32
TMIGD3-202ENST00000369717 CCDC146Q8IYE0 955 aa13.07□□□□□ -0.32
TMIGD3-202ENST00000369717 SCN7AQ01118 1682 aa13.06□□□□□ -0.32
TMIGD3-202ENST00000369717 CCDC27Q2M243 656 aa13.06□□□□□ -0.32
TMIGD3-202ENST00000369717 BCS1LQ9Y276 419 aa13.06□□□□□ -0.32
TMIGD3-202ENST00000369717 APAF1O14727 1248 aa13.05□□□□□ -0.32
TMIGD3-202ENST00000369717 CHRNA5P30532 468 aa13.05□□□□□ -0.32
TMIGD3-202ENST00000369717 PDE6BP35913 854 aa13.05□□□□□ -0.32
TMIGD3-202ENST00000369717 PIP4K2AP48426 406 aaPredicted RBP13.05□□□□□ -0.32
TMIGD3-202ENST00000369717 CCDC184Q52MB2 194 aa13.05□□□□□ -0.32
TMIGD3-202ENST00000369717 RRP7AQ9Y3A4 280 aaKnown RBP13.05□□□□□ -0.32
TMIGD3-202ENST00000369717 MAP3K15Q6ZN16 1313 aa13.05□□□□□ -0.32
TMIGD3-202ENST00000369717 ATP10DQ9P241 1426 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms