RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 GOLGB1Q14789 3259 aaKnown RBP25.11■■□□□ 1.61
CKS1B-203ENST00000368439 MAPK8IP3Q9UPT6 1336 aa25.11■■□□□ 1.61
CKS1B-203ENST00000368439 ZNF316A6NFI3 1004 aaPredicted RBP25.1■■□□□ 1.61
CKS1B-203ENST00000368439 COL15A1P39059 1388 aa25.09■■□□□ 1.61
CKS1B-203ENST00000368439 STARD3NLO95772 234 aa25.09■■□□□ 1.61
CKS1B-203ENST00000368439 TAF7Q15545 349 aaPredicted RBP25.09■■□□□ 1.61
CKS1B-203ENST00000368439 TEX13AQ9BXU3 409 aaPredicted RBP25.09■■□□□ 1.61
CKS1B-203ENST00000368439 KIAA1551Q9HCM1 1747 aa25.09■■□□□ 1.61
CKS1B-203ENST00000368439 EIF5P55010 431 aaKnown RBP25.07■■□□□ 1.6
CKS1B-203ENST00000368439 FKBP8Q14318 412 aa25.07■■□□□ 1.6
CKS1B-203ENST00000368439 CANXP27824 592 aaKnown RBP25.06■■□□□ 1.6
CKS1B-203ENST00000368439 THUMPD2Q9BTF0 503 aaKnown RBP25.06■■□□□ 1.6
CKS1B-203ENST00000368439 NARFQ9UHQ1 456 aa25.06■■□□□ 1.6
CKS1B-203ENST00000368439 CHD4Q14839 1912 aa25.06■■□□□ 1.6
CKS1B-203ENST00000368439 PRAMEF22A3QJZ6 481 aa25.05■■□□□ 1.6
CKS1B-203ENST00000368439 USPL1Q5W0Q7 1092 aa25.05■■□□□ 1.6
CKS1B-203ENST00000368439 MIS18AQ9NYP9 233 aa25.05■■□□□ 1.6
CKS1B-203ENST00000368439 ADAMTS8Q9UP79 889 aa25.04■■□□□ 1.6
CKS1B-203ENST00000368439 USP16Q9Y5T5 823 aa25.04■■□□□ 1.6
CKS1B-203ENST00000368439 C10orf71Q711Q0 1435 aa25.03■■□□□ 1.6
CKS1B-203ENST00000368439 A1BGP04217 495 aa25.03■■□□□ 1.6
CKS1B-203ENST00000368439 TM4SF1P30408 202 aa25.03■■□□□ 1.6
CKS1B-203ENST00000368439 TMPOP42166 694 aaKnown RBP25.03■■□□□ 1.6
CKS1B-203ENST00000368439 DDR1Q08345 913 aa25.03■■□□□ 1.6
CKS1B-203ENST00000368439 GPR162Q16538 588 aa25.03■■□□□ 1.6
CKS1B-203ENST00000368439 CCDC146Q8IYE0 955 aa25.03■■□□□ 1.6
CKS1B-203ENST00000368439 BCL2L12Q9HB09 334 aa25.03■■□□□ 1.6
CKS1B-203ENST00000368439 ZPR1O75312 459 aa25.02■■□□□ 1.6
CKS1B-203ENST00000368439 SNRPA1P09661 255 aaKnown RBP25.02■■□□□ 1.6
CKS1B-203ENST00000368439 YBX3P16989 372 aaKnown RBP eCLIP25.02■■□□□ 1.6
CKS1B-203ENST00000368439 RIPK4P57078 832 aa25.02■■□□□ 1.6
CKS1B-203ENST00000368439 WDR43Q15061 677 aaKnown RBP eCLIP25.02■■□□□ 1.6
CKS1B-203ENST00000368439 LAMB4A4D0S4 1761 aa25.02■■□□□ 1.6
CKS1B-203ENST00000368439 SCN7AQ01118 1682 aa25.01■■□□□ 1.59
CKS1B-203ENST00000368439 N4BP2Q86UW6 1770 aaPredicted RBP25.01■■□□□ 1.59
CKS1B-203ENST00000368439 IL6STP40189 918 aaPredicted RBP25.01■■□□□ 1.59
CKS1B-203ENST00000368439 PNISRQ8TF01 805 aaKnown RBP25.01■■□□□ 1.59
CKS1B-203ENST00000368439 AFDNP55196 1824 aaKnown RBP25■■□□□ 1.59
CKS1B-203ENST00000368439 RUNDC1Q96C34 613 aa25■■□□□ 1.59
CKS1B-203ENST00000368439 PARP3Q9Y6F1 533 aa25■■□□□ 1.59
CKS1B-203ENST00000368439 NRXN2Q9P2S2 1712 aa25■■□□□ 1.59
CKS1B-203ENST00000368439 PXDNLA1KZ92 1463 aa24.99■■□□□ 1.59
CKS1B-203ENST00000368439 YY1P25490 414 aa24.99■■□□□ 1.59
CKS1B-203ENST00000368439 A0A087WZG4 1122 aa24.98■■□□□ 1.59
CKS1B-203ENST00000368439 POLRMTO00411 1230 aaKnown RBP24.98■■□□□ 1.59
CKS1B-203ENST00000368439 PELP1Q8IZL8 1130 aaKnown RBP24.98■■□□□ 1.59
CKS1B-203ENST00000368439 RRP7AQ9Y3A4 280 aaKnown RBP24.98■■□□□ 1.59
CKS1B-203ENST00000368439 BCORQ6W2J9 1755 aa24.98■■□□□ 1.59
CKS1B-203ENST00000368439 EIF4A1P60842 406 aaKnown RBP24.97■■□□□ 1.59
CKS1B-203ENST00000368439 BRCA1P38398 1863 aaKnown RBP24.97■■□□□ 1.59
CKS1B-203ENST00000368439 NFIXQ14938 502 aa24.96■■□□□ 1.59
CKS1B-203ENST00000368439 CCDC184Q52MB2 194 aa24.96■■□□□ 1.59
CKS1B-203ENST00000368439 NBPF26B4DH59 902 aa24.95■■□□□ 1.58
CKS1B-203ENST00000368439 PIP4K2AP48426 406 aaPredicted RBP24.95■■□□□ 1.58
CKS1B-203ENST00000368439 TGFB2P61812 414 aa24.95■■□□□ 1.58
CKS1B-203ENST00000368439 NBPF10Q6P3W6 841 aaKnown RBP24.95■■□□□ 1.58
CKS1B-203ENST00000368439 NBPF15Q8N660 670 aa24.95■■□□□ 1.58
CKS1B-203ENST00000368439 TRIM35Q9UPQ4 493 aa24.95■■□□□ 1.58
CKS1B-203ENST00000368439 TBC1D2BQ9UPU7 963 aa24.95■■□□□ 1.58
CKS1B-203ENST00000368439 GIGYF1O75420 1035 aaPredicted RBP24.94■■□□□ 1.58
CKS1B-203ENST00000368439 LMOD3Q0VAK6 560 aa24.94■■□□□ 1.58
CKS1B-203ENST00000368439 NEUROD2Q15784 382 aa24.93■■□□□ 1.58
CKS1B-203ENST00000368439 ZNF330Q9Y3S2 320 aaPredicted RBP24.93■■□□□ 1.58
CKS1B-203ENST00000368439 GRIN3BO60391 1043 aa24.92■■□□□ 1.58
CKS1B-203ENST00000368439 CAMTA2O94983 1202 aa24.92■■□□□ 1.58
CKS1B-203ENST00000368439 BABAM1Q9NWV8 329 aa24.92■■□□□ 1.58
CKS1B-203ENST00000368439 A0A0G2JLW4 131 aa24.91■■□□□ 1.58
CKS1B-203ENST00000368439 DPEP1P16444 411 aa24.9■■□□□ 1.58
CKS1B-203ENST00000368439 KCNA3P22001 575 aa24.9■■□□□ 1.58
CKS1B-203ENST00000368439 TSPYL4Q9UJ04 414 aa24.9■■□□□ 1.58
CKS1B-203ENST00000368439 WWC3Q9ULE0 1092 aa24.9■■□□□ 1.58
CKS1B-203ENST00000368439 TBC1D9BQ66K14 1250 aa24.89■■□□□ 1.58
CKS1B-203ENST00000368439 DZIP3Q86Y13 1208 aaKnown RBP24.89■■□□□ 1.58
CKS1B-203ENST00000368439 SERPINB2P05120 415 aa24.88■■□□□ 1.57
CKS1B-203ENST00000368439 ANKRD31Q8N7Z5 1873 aa24.86■■□□□ 1.57
CKS1B-203ENST00000368439 CHL1O00533 1208 aa24.86■■□□□ 1.57
CKS1B-203ENST00000368439 BICDL1Q6ZP65 573 aa24.86■■□□□ 1.57
CKS1B-203ENST00000368439 DLEC1Q9Y238 1755 aa24.85■■□□□ 1.57
CKS1B-203ENST00000368439 ARFGEF1Q9Y6D6 1849 aa24.85■■□□□ 1.57
CKS1B-203ENST00000368439 APAF1O14727 1248 aa24.85■■□□□ 1.57
CKS1B-203ENST00000368439 NPM2Q86SE8 214 aaKnown RBP24.85■■□□□ 1.57
CKS1B-203ENST00000368439 CARMIL3Q8ND23 1372 aa24.84■■□□□ 1.57
CKS1B-203ENST00000368439 ANP32CO43423 234 aa24.84■■□□□ 1.57
CKS1B-203ENST00000368439 RGL2O15211 777 aa24.82■■□□□ 1.56
CKS1B-203ENST00000368439 CHRNA5P30532 468 aa24.82■■□□□ 1.56
CKS1B-203ENST00000368439 CLEC4GQ6UXB4 293 aa24.82■■□□□ 1.56
CKS1B-203ENST00000368439 NUP98P52948 1817 aa24.81■■□□□ 1.56
CKS1B-203ENST00000368439 ZNF784Q8NCA9 323 aaPredicted RBP24.8■■□□□ 1.56
CKS1B-203ENST00000368439 BCS1LQ9Y276 419 aa24.8■■□□□ 1.56
CKS1B-203ENST00000368439 ERBB4Q15303 1308 aa24.8■■□□□ 1.56
CKS1B-203ENST00000368439 PDIA6Q15084 440 aa24.79■■□□□ 1.56
CKS1B-203ENST00000368439 PRR5LQ6MZQ0 368 aa24.79■■□□□ 1.56
CKS1B-203ENST00000368439 LRP10Q7Z4F1 713 aa24.79■■□□□ 1.56
CKS1B-203ENST00000368439 SETDB2Q96T68 719 aa24.79■■□□□ 1.56
CKS1B-203ENST00000368439 PIM2Q9P1W9 311 aa24.79■■□□□ 1.56
CKS1B-203ENST00000368439 ZNF853P0CG23 659 aa24.78■■□□□ 1.56
CKS1B-203ENST00000368439 HLFQ16534 295 aa24.78■■□□□ 1.56
CKS1B-203ENST00000368439 KRT24Q2M2I5 525 aa24.78■■□□□ 1.56
CKS1B-203ENST00000368439 CFAP44Q96MT7 982 aa24.78■■□□□ 1.56
CKS1B-203ENST00000368439 MYL6BP14649 208 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms