RNA–Protein interactions for RNA: ENST00000368407.7

EFNA1-202, Transcript of ephrin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-202ENST00000368407 TSPYL6Q8N831 410 aa33.12■■■□□ 2.89
EFNA1-202ENST00000368407 C8orf58Q8NAV2 365 aa33.12■■■□□ 2.89
EFNA1-202ENST00000368407 HDAC1Q13547 482 aaPredicted RBP33.12■■■□□ 2.89
EFNA1-202ENST00000368407 TBC1D2Q9BYX2 928 aa33.12■■■□□ 2.89
EFNA1-202ENST00000368407 ELL2O00472 640 aaPredicted RBP33.11■■■□□ 2.89
EFNA1-202ENST00000368407 KCNQ2O43526 872 aa33.11■■■□□ 2.89
EFNA1-202ENST00000368407 ZNF790Q6PG37 636 aa33.11■■■□□ 2.89
EFNA1-202ENST00000368407 EP400Q96L91 3159 aa33.11■■■□□ 2.89
EFNA1-202ENST00000368407 KAT6BQ8WYB5 2073 aa33.11■■■□□ 2.89
EFNA1-202ENST00000368407 BCL9O00512 1426 aa33.1■■■□□ 2.89
EFNA1-202ENST00000368407 KDM3BQ7LBC6 1761 aa33.1■■■□□ 2.89
EFNA1-202ENST00000368407 ITGB4P16144 1822 aa33.09■■■□□ 2.89
EFNA1-202ENST00000368407 EIF4A1P60842 406 aaKnown RBP33.08■■■□□ 2.89
EFNA1-202ENST00000368407 DZIP1LQ8IYY4 767 aaKnown RBP33.07■■■□□ 2.88
EFNA1-202ENST00000368407 PTF1AQ7RTS3 328 aa33.06■■■□□ 2.88
EFNA1-202ENST00000368407 ASAP1Q9ULH1 1129 aa33.06■■■□□ 2.88
EFNA1-202ENST00000368407 PRKCSHP14314 528 aaPredicted RBP33.05■■■□□ 2.88
EFNA1-202ENST00000368407 TWISTNBQ3B726 338 aaPredicted RBP33.04■■■□□ 2.88
EFNA1-202ENST00000368407 TTC5Q8N0Z6 440 aa33.04■■■□□ 2.88
EFNA1-202ENST00000368407 ATG3Q9NT62 314 aa33.04■■■□□ 2.88
EFNA1-202ENST00000368407 ZNF496Q96IT1 587 aaPredicted RBP33.03■■■□□ 2.88
EFNA1-202ENST00000368407 SLKQ9H2G2 1235 aaPredicted RBP33.03■■■□□ 2.88
EFNA1-202ENST00000368407 VAMP4O75379 141 aa33.02■■■□□ 2.88
EFNA1-202ENST00000368407 DDX19BQ9UMR2 479 aa33.02■■■□□ 2.88
EFNA1-202ENST00000368407 FAM196AQ6ZSG2 479 aa33■■■□□ 2.87
EFNA1-202ENST00000368407 PAPPAQ13219 1627 aa33■■■□□ 2.87
EFNA1-202ENST00000368407 HEG1Q9ULI3 1381 aa33■■■□□ 2.87
EFNA1-202ENST00000368407 FTSJ3Q8IY81 847 aaKnown RBP33■■■□□ 2.87
EFNA1-202ENST00000368407 CHMP5Q9NZZ3 219 aa33■■■□□ 2.87
EFNA1-202ENST00000368407 FSD2A1L4K1 749 aa32.99■■■□□ 2.87
EFNA1-202ENST00000368407 PTCD1O75127 700 aaKnown RBP32.99■■■□□ 2.87
EFNA1-202ENST00000368407 TNNQ9UQP3 1299 aa32.99■■■□□ 2.87
EFNA1-202ENST00000368407 PRAMEF22A3QJZ6 481 aa32.98■■■□□ 2.87
EFNA1-202ENST00000368407 SMC5Q8IY18 1101 aa32.98■■■□□ 2.87
EFNA1-202ENST00000368407 KCPQ6ZWJ8 1503 aa32.97■■■□□ 2.87
EFNA1-202ENST00000368407 GIGYF1O75420 1035 aaPredicted RBP32.96■■■□□ 2.87
EFNA1-202ENST00000368407 MCM4P33991 863 aa32.96■■■□□ 2.87
EFNA1-202ENST00000368407 FMNL2Q96PY5 1086 aa32.96■■■□□ 2.87
EFNA1-202ENST00000368407 C22orf23Q9BZE7 217 aa32.96■■■□□ 2.87
EFNA1-202ENST00000368407 ISY1Q9ULR0 285 aaKnown RBP32.96■■■□□ 2.87
EFNA1-202ENST00000368407 NHSQ6T4R5 1651 aa32.95■■■□□ 2.87
EFNA1-202ENST00000368407 BCL2L13Q9BXK5 485 aa32.95■■■□□ 2.87
EFNA1-202ENST00000368407 SBF2Q86WG5 1849 aa32.93■■■□□ 2.86
EFNA1-202ENST00000368407 UBR2Q8IWV8 1755 aa32.93■■■□□ 2.86
EFNA1-202ENST00000368407 SSH1Q8WYL5 1049 aa32.92■■■□□ 2.86
EFNA1-202ENST00000368407 NECTIN2Q92692 538 aa32.92■■■□□ 2.86
EFNA1-202ENST00000368407 RBM42Q9BTD8 480 aaKnown RBP32.92■■■□□ 2.86
EFNA1-202ENST00000368407 TRIM37O94972 964 aa32.91■■■□□ 2.86
EFNA1-202ENST00000368407 ATF7IPQ6VMQ6 1270 aa32.91■■■□□ 2.86
EFNA1-202ENST00000368407 KIF16BQ96L93 1317 aa32.91■■■□□ 2.86
EFNA1-202ENST00000368407 BCL11BQ9C0K0 894 aaPredicted RBP32.9■■■□□ 2.86
EFNA1-202ENST00000368407 EIF2S2P20042 333 aaKnown RBP32.9■■■□□ 2.86
EFNA1-202ENST00000368407 SLC4A9Q96Q91 983 aa32.9■■■□□ 2.86
EFNA1-202ENST00000368407 HOXB7P09629 217 aa32.89■■■□□ 2.86
EFNA1-202ENST00000368407 SNRPA1P09661 255 aaKnown RBP32.89■■■□□ 2.86
EFNA1-202ENST00000368407 TRIM27P14373 513 aa32.89■■■□□ 2.86
EFNA1-202ENST00000368407 ZNF428Q96B54 188 aa32.89■■■□□ 2.86
EFNA1-202ENST00000368407 SMC4Q9NTJ3 1288 aa32.89■■■□□ 2.86
EFNA1-202ENST00000368407 PALLDQ8WX93 1383 aa32.89■■■□□ 2.86
EFNA1-202ENST00000368407 GOLGA6L3A6NEY3 463 aa32.89■■■□□ 2.85
EFNA1-202ENST00000368407 SNX21Q969T3 373 aa32.89■■■□□ 2.85
EFNA1-202ENST00000368407 SOS1Q07889 1333 aaPredicted RBP32.88■■■□□ 2.85
EFNA1-202ENST00000368407 HDGFL1Q5TGJ6 251 aa32.88■■■□□ 2.85
EFNA1-202ENST00000368407 BTAF1O14981 1849 aa32.87■■■□□ 2.85
EFNA1-202ENST00000368407 RBM25P49756 843 aaKnown RBP32.87■■■□□ 2.85
EFNA1-202ENST00000368407 BRPF1P55201 1214 aaPredicted RBP32.87■■■□□ 2.85
EFNA1-202ENST00000368407 USP16Q9Y5T5 823 aa32.87■■■□□ 2.85
EFNA1-202ENST00000368407 DDX11L8A8MPP1 907 aa32.87■■■□□ 2.85
EFNA1-202ENST00000368407 ALDH1L2Q3SY69 923 aa32.87■■■□□ 2.85
EFNA1-202ENST00000368407 ZBTB4Q9P1Z0 1013 aaPredicted RBP32.87■■■□□ 2.85
EFNA1-202ENST00000368407 C5P01031 1676 aa32.86■■■□□ 2.85
EFNA1-202ENST00000368407 IPO8O15397 1037 aaKnown RBP32.86■■■□□ 2.85
EFNA1-202ENST00000368407 SMARCC1Q92922 1105 aaPredicted RBP32.86■■■□□ 2.85
EFNA1-202ENST00000368407 HSCBQ8IWL3 235 aa32.84■■■□□ 2.85
EFNA1-202ENST00000368407 CIZ1Q9ULV3 898 aaPredicted RBP32.84■■■□□ 2.85
EFNA1-202ENST00000368407 ZBTB40Q9NUA8 1239 aa32.83■■■□□ 2.85
EFNA1-202ENST00000368407 LOC102724428A0A0B4J2F2 783 aa32.83■■■□□ 2.85
EFNA1-202ENST00000368407 DDIT3P35638 169 aa32.83■■■□□ 2.85
EFNA1-202ENST00000368407 SIK1P57059 783 aa32.83■■■□□ 2.85
EFNA1-202ENST00000368407 CCDC30Q5VVM6 783 aa32.83■■■□□ 2.85
EFNA1-202ENST00000368407 DNAJC10Q8IXB1 793 aa32.83■■■□□ 2.85
EFNA1-202ENST00000368407 VSIG10Q8N0Z9 540 aa32.83■■■□□ 2.85
EFNA1-202ENST00000368407 MRPL50Q8N5N7 158 aaKnown RBP32.82■■■□□ 2.84
EFNA1-202ENST00000368407 CHMP4BQ9H444 224 aaKnown RBP32.81■■■□□ 2.84
EFNA1-202ENST00000368407 PTMSP20962 102 aa32.8■■■□□ 2.84
EFNA1-202ENST00000368407 NUCB1Q02818 461 aa32.79■■■□□ 2.84
EFNA1-202ENST00000368407 CHPF2Q9P2E5 772 aa32.79■■■□□ 2.84
EFNA1-202ENST00000368407 SLC4A2P04920 1241 aa32.79■■■□□ 2.84
EFNA1-202ENST00000368407 XRCC6P12956 609 aaKnown RBP eCLIP32.79■■■□□ 2.84
EFNA1-202ENST00000368407 ANXA1P04083 346 aa32.78■■■□□ 2.84
EFNA1-202ENST00000368407 ATP6V1AP38606 617 aa32.78■■■□□ 2.84
EFNA1-202ENST00000368407 MRE11P49959 708 aa32.78■■■□□ 2.84
EFNA1-202ENST00000368407 MFAP1P55081 439 aaKnown RBP32.78■■■□□ 2.84
EFNA1-202ENST00000368407 ITPRIPQ8IWB1 547 aa32.78■■■□□ 2.84
EFNA1-202ENST00000368407 KCNQ4P56696 695 aa32.77■■■□□ 2.84
EFNA1-202ENST00000368407 STK31Q9BXU1 1019 aa32.77■■■□□ 2.84
EFNA1-202ENST00000368407 ITPK1Q13572 414 aa32.77■■■□□ 2.84
EFNA1-202ENST00000368407 TRAK2O60296 914 aa32.76■■■□□ 2.83
EFNA1-202ENST00000368407 PIP4K2AP48426 406 aaPredicted RBP32.76■■■□□ 2.83
EFNA1-202ENST00000368407 PROSER3Q2NL68 480 aa32.76■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms