RNA–Protein interactions for RNA: ENST00000366892.5

PRKN-202, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-202ENST00000366892 FMNL2Q96PY5 1086 aa22.42■■□□□ 1.18
PRKN-202ENST00000366892 TEX13AQ9BXU3 409 aaPredicted RBP22.41■■□□□ 1.18
PRKN-202ENST00000366892 PARP3Q9Y6F1 533 aa22.41■■□□□ 1.18
PRKN-202ENST00000366892 UBR2Q8IWV8 1755 aa22.41■■□□□ 1.18
PRKN-202ENST00000366892 GRIN3BO60391 1043 aa22.41■■□□□ 1.18
PRKN-202ENST00000366892 ZPR1O75312 459 aa22.41■■□□□ 1.18
PRKN-202ENST00000366892 CANXP27824 592 aaKnown RBP22.41■■□□□ 1.18
PRKN-202ENST00000366892 SIPA1L3O60292 1781 aaPredicted RBP22.4■■□□□ 1.18
PRKN-202ENST00000366892 USPL1Q5W0Q7 1092 aa22.4■■□□□ 1.18
PRKN-202ENST00000366892 PNNQ9H307 717 aaKnown RBP22.4■■□□□ 1.18
PRKN-202ENST00000366892 NARFQ9UHQ1 456 aa22.39■■□□□ 1.17
PRKN-202ENST00000366892 C4AP0C0L4 1744 aa22.39■■□□□ 1.17
PRKN-202ENST00000366892 MYBBP1AQ9BQG0 1328 aaKnown RBP22.38■■□□□ 1.17
PRKN-202ENST00000366892 COL15A1P39059 1388 aa22.37■■□□□ 1.17
PRKN-202ENST00000366892 EIF5P55010 431 aaKnown RBP22.37■■□□□ 1.17
PRKN-202ENST00000366892 TAF7Q15545 349 aaPredicted RBP22.37■■□□□ 1.17
PRKN-202ENST00000366892 TM4SF1P30408 202 aa22.36■■□□□ 1.17
PRKN-202ENST00000366892 TGFB2P61812 414 aa22.36■■□□□ 1.17
PRKN-202ENST00000366892 DDR1Q08345 913 aa22.36■■□□□ 1.17
PRKN-202ENST00000366892 NFE2L2Q16236 605 aa22.36■■□□□ 1.17
PRKN-202ENST00000366892 WWC3Q9ULE0 1092 aa22.36■■□□□ 1.17
PRKN-202ENST00000366892 BCL2L12Q9HB09 334 aa22.35■■□□□ 1.17
PRKN-202ENST00000366892 MIS18AQ9NYP9 233 aa22.35■■□□□ 1.17
PRKN-202ENST00000366892 USP16Q9Y5T5 823 aa22.35■■□□□ 1.17
PRKN-202ENST00000366892 MAPK8IP3Q9UPT6 1336 aa22.34■■□□□ 1.17
PRKN-202ENST00000366892 A1BGP04217 495 aa22.34■■□□□ 1.17
PRKN-202ENST00000366892 C10orf71Q711Q0 1435 aa22.34■■□□□ 1.17
PRKN-202ENST00000366892 CHD4Q14839 1912 aa22.33■■□□□ 1.17
PRKN-202ENST00000366892 A0A0G2JLW4 131 aa22.33■■□□□ 1.17
PRKN-202ENST00000366892 PRAMEF22A3QJZ6 481 aa22.33■■□□□ 1.17
PRKN-202ENST00000366892 POLRMTO00411 1230 aaKnown RBP22.33■■□□□ 1.17
PRKN-202ENST00000366892 IL6STP40189 918 aaPredicted RBP22.33■■□□□ 1.17
PRKN-202ENST00000366892 ZNF784Q8NCA9 323 aaPredicted RBP22.33■■□□□ 1.17
PRKN-202ENST00000366892 A0A087WZG4 1122 aa22.32■■□□□ 1.16
PRKN-202ENST00000366892 SNRPA1P09661 255 aaKnown RBP22.32■■□□□ 1.16
PRKN-202ENST00000366892 PRKRIP1Q9H875 184 aaPredicted RBP22.32■■□□□ 1.16
PRKN-202ENST00000366892 PXDNLA1KZ92 1463 aa22.32■■□□□ 1.16
PRKN-202ENST00000366892 NFIXQ14938 502 aa22.31■■□□□ 1.16
PRKN-202ENST00000366892 DPEP1P16444 411 aa22.31■■□□□ 1.16
PRKN-202ENST00000366892 THUMPD2Q9BTF0 503 aaKnown RBP22.31■■□□□ 1.16
PRKN-202ENST00000366892 ZNF330Q9Y3S2 320 aaPredicted RBP22.31■■□□□ 1.16
PRKN-202ENST00000366892 TBC1D2BQ9UPU7 963 aa22.3■■□□□ 1.16
PRKN-202ENST00000366892 KIF13BQ9NQT8 1826 aa22.29■■□□□ 1.16
PRKN-202ENST00000366892 KCNA3P22001 575 aa22.28■■□□□ 1.16
PRKN-202ENST00000366892 RIPK4P57078 832 aa22.28■■□□□ 1.16
PRKN-202ENST00000366892 PNISRQ8TF01 805 aaKnown RBP22.28■■□□□ 1.16
PRKN-202ENST00000366892 PIP4K2AP48426 406 aaPredicted RBP22.27■■□□□ 1.16
PRKN-202ENST00000366892 NPM2Q86SE8 214 aaKnown RBP22.27■■□□□ 1.16
PRKN-202ENST00000366892 DLG5Q8TDM6 1919 aa22.26■■□□□ 1.15
PRKN-202ENST00000366892 SERPINB2P05120 415 aa22.26■■□□□ 1.15
PRKN-202ENST00000366892 TMPOP42166 694 aaKnown RBP22.26■■□□□ 1.15
PRKN-202ENST00000366892 BICDL1Q6ZP65 573 aa22.26■■□□□ 1.15
PRKN-202ENST00000366892 BCS1LQ9Y276 419 aa22.26■■□□□ 1.15
PRKN-202ENST00000366892 WDR43Q15061 677 aaKnown RBP eCLIP22.25■■□□□ 1.153e-8■■■■■ 70.1
PRKN-202ENST00000366892 TBC1D9BQ66K14 1250 aa22.25■■□□□ 1.15
PRKN-202ENST00000366892 CCDC146Q8IYE0 955 aa22.25■■□□□ 1.15
PRKN-202ENST00000366892 ADAMTS8Q9UP79 889 aa22.25■■□□□ 1.15
PRKN-202ENST00000366892 KIAA1551Q9HCM1 1747 aa22.25■■□□□ 1.15
PRKN-202ENST00000366892 EIF4A1P60842 406 aaKnown RBP22.24■■□□□ 1.15
PRKN-202ENST00000366892 N4BP2Q86UW6 1770 aaPredicted RBP22.23■■□□□ 1.15
PRKN-202ENST00000366892 NBPF26B4DH59 902 aa22.23■■□□□ 1.15
PRKN-202ENST00000366892 GIGYF1O75420 1035 aaPredicted RBP22.23■■□□□ 1.15
PRKN-202ENST00000366892 CAMTA2O94983 1202 aa22.23■■□□□ 1.15
PRKN-202ENST00000366892 NBPF10Q6P3W6 841 aaKnown RBP22.23■■□□□ 1.15
PRKN-202ENST00000366892 DZIP3Q86Y13 1208 aaKnown RBP22.23■■□□□ 1.15
PRKN-202ENST00000366892 NBPF15Q8N660 670 aa22.23■■□□□ 1.15
PRKN-202ENST00000366892 PIM2Q9P1W9 311 aa22.23■■□□□ 1.15
PRKN-202ENST00000366892 CHRNA5P30532 468 aa22.22■■□□□ 1.15
PRKN-202ENST00000366892 RRP7AQ9Y3A4 280 aaKnown RBP22.22■■□□□ 1.15
PRKN-202ENST00000366892 RUNDC1Q96C34 613 aa22.21■■□□□ 1.15
PRKN-202ENST00000366892 NEUROD2Q15784 382 aa22.21■■□□□ 1.15
PRKN-202ENST00000366892 LMOD3Q0VAK6 560 aa22.2■■□□□ 1.14
PRKN-202ENST00000366892 DALRD3Q5D0E6 543 aaKnown RBP22.19■■□□□ 1.14
PRKN-202ENST00000366892 TSPYL4Q9UJ04 414 aa22.19■■□□□ 1.14
PRKN-202ENST00000366892 SETDB2Q96T68 719 aa22.18■■□□□ 1.14
PRKN-202ENST00000366892 CCER2I3L3R5 266 aa22.17■■□□□ 1.14
PRKN-202ENST00000366892 CLEC4GQ6UXB4 293 aa22.17■■□□□ 1.14
PRKN-202ENST00000366892 ARHGAP27Q6ZUM4 889 aa22.17■■□□□ 1.14
PRKN-202ENST00000366892 AFDNP55196 1824 aaKnown RBP22.17■■□□□ 1.14
PRKN-202ENST00000366892 KDM3BQ7LBC6 1761 aa22.17■■□□□ 1.14
PRKN-202ENST00000366892 NRXN2Q9P2S2 1712 aa22.17■■□□□ 1.14
PRKN-202ENST00000366892 BABAM1Q9NWV8 329 aa22.16■■□□□ 1.14
PRKN-202ENST00000366892 TRIM35Q9UPQ4 493 aa22.16■■□□□ 1.14
PRKN-202ENST00000366892 CARMIL3Q8ND23 1372 aa22.16■■□□□ 1.14
PRKN-202ENST00000366892 PRR5LQ6MZQ0 368 aa22.16■■□□□ 1.14
PRKN-202ENST00000366892 CCDC24Q8N4L8 307 aa22.15■■□□□ 1.14
PRKN-202ENST00000366892 SCN7AQ01118 1682 aa22.15■■□□□ 1.14
PRKN-202ENST00000366892 ZNF652Q9Y2D9 606 aa22.14■■□□□ 1.13
PRKN-202ENST00000366892 BRCA1P38398 1863 aaKnown RBP22.14■■□□□ 1.13
PRKN-202ENST00000366892 H0YIN7 160 aa22.13■■□□□ 1.13
PRKN-202ENST00000366892 C2CD5Q86YS7 1000 aa22.13■■□□□ 1.13
PRKN-202ENST00000366892 NGEFQ8N5V2 710 aa22.13■■□□□ 1.13
PRKN-202ENST00000366892 BRIP1Q9BX63 1249 aa22.13■■□□□ 1.13
PRKN-202ENST00000366892 ATP10DQ9P241 1426 aa22.13■■□□□ 1.13
PRKN-202ENST00000366892 ADCY9O60503 1353 aa22.13■■□□□ 1.13
PRKN-202ENST00000366892 RGL2O15211 777 aa22.12■■□□□ 1.13
PRKN-202ENST00000366892 ANP32CO43423 234 aa22.12■■□□□ 1.13
PRKN-202ENST00000366892 CHL1O00533 1208 aa22.11■■□□□ 1.13
PRKN-202ENST00000366892 HLFQ16534 295 aa22.11■■□□□ 1.13
PRKN-202ENST00000366892 CNBD1Q8NA66 436 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms