RNA–Protein interactions for RNA: ENST00000361796.9

CTNND1-204, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-204ENST00000361796 SCLT1Q96NL6 688 aa9.38□□□□□ -0.91
CTNND1-204ENST00000361796 NUP88Q99567 741 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-204ENST00000361796 NAPBQ9H115 298 aa9.38□□□□□ -0.91
CTNND1-204ENST00000361796 MACROD2A1Z1Q3 448 aa9.38□□□□□ -0.91
CTNND1-204ENST00000361796 HAND2P61296 217 aa9.38□□□□□ -0.91
CTNND1-204ENST00000361796 SPA17Q15506 151 aa9.38□□□□□ -0.91
CTNND1-204ENST00000361796 SPTY2D1Q68D10 685 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-204ENST00000361796 SYNJ1O43426 1573 aa9.38□□□□□ -0.91
CTNND1-204ENST00000361796 HFM1A2PYH4 1435 aa9.38□□□□□ -0.91
CTNND1-204ENST00000361796 CDK13Q14004 1512 aaKnown RBP9.38□□□□□ -0.91
CTNND1-204ENST00000361796 GOLGA6L7A0A1B0GV03 622 aa9.38□□□□□ -0.91
CTNND1-204ENST00000361796 GOLGA8BA8MQT2 603 aa9.38□□□□□ -0.91
CTNND1-204ENST00000361796 SFPQP23246 707 aaKnown RBP eCLIP9.38□□□□□ -0.911e-8■■■□□ 15.1
CTNND1-204ENST00000361796 CACNA2D4Q7Z3S7 1137 aa9.38□□□□□ -0.91
CTNND1-204ENST00000361796 TXLNBQ8N3L3 684 aa9.38□□□□□ -0.91
CTNND1-204ENST00000361796 DYDC1Q8WWB3 177 aa9.38□□□□□ -0.91
CTNND1-204ENST00000361796 TOP1P11387 765 aaKnown RBP9.37□□□□□ -0.91
CTNND1-204ENST00000361796 GJB2P29033 226 aa9.37□□□□□ -0.91
CTNND1-204ENST00000361796 TMCO3Q6UWJ1 677 aa9.37□□□□□ -0.91
CTNND1-204ENST00000361796 ZSCAN30Q86W11 494 aa9.37□□□□□ -0.91
CTNND1-204ENST00000361796 TBC1D2Q9BYX2 928 aa9.37□□□□□ -0.91
CTNND1-204ENST00000361796 TMOD3Q9NYL9 352 aa9.37□□□□□ -0.91
CTNND1-204ENST00000361796 U3KPZ7 1027 aaPredicted RBP9.37□□□□□ -0.91
CTNND1-204ENST00000361796 KIF4BQ2VIQ3 1234 aa9.37□□□□□ -0.91
CTNND1-204ENST00000361796 DZIP1Q86YF9 867 aaKnown RBP9.37□□□□□ -0.91
CTNND1-204ENST00000361796 SNRKQ9NRH2 765 aa9.37□□□□□ -0.91
CTNND1-204ENST00000361796 GOLGA6L10A0A0M3HER8 536 aa9.37□□□□□ -0.91
CTNND1-204ENST00000361796 VAT1LQ9HCJ6 419 aa9.37□□□□□ -0.91
CTNND1-204ENST00000361796 SLC12A7Q9Y666 1083 aa9.37□□□□□ -0.91
CTNND1-204ENST00000361796 STARD3NLO95772 234 aa9.37□□□□□ -0.91
CTNND1-204ENST00000361796 CRACR2AQ9BSW2 395 aa9.37□□□□□ -0.91
CTNND1-204ENST00000361796 CIZ1Q9ULV3 898 aaPredicted RBP9.37□□□□□ -0.91
CTNND1-204ENST00000361796 TMC6Q7Z403 805 aa9.37□□□□□ -0.91
CTNND1-204ENST00000361796 FAM83GA6ND36 823 aa9.36□□□□□ -0.91
CTNND1-204ENST00000361796 GOLGA8AA7E2F4 631 aa9.36□□□□□ -0.91
CTNND1-204ENST00000361796 GLRX3O76003 335 aaKnown RBP9.36□□□□□ -0.91
CTNND1-204ENST00000361796 ADAMTS2O95450 1211 aa9.36□□□□□ -0.91
CTNND1-204ENST00000361796 ZBTB3Q9H5J0 574 aa9.36□□□□□ -0.91
CTNND1-204ENST00000361796 PODXL2Q9NZ53 605 aa9.36□□□□□ -0.91
CTNND1-204ENST00000361796 KIF5CO60282 957 aa9.36□□□□□ -0.91
CTNND1-204ENST00000361796 MAP2K1Q02750 393 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-204ENST00000361796 SSRP1Q08945 709 aaKnown RBP9.36□□□□□ -0.91
CTNND1-204ENST00000361796 HSP90AA4PQ58FG1 418 aa9.36□□□□□ -0.91
CTNND1-204ENST00000361796 CAVIN4Q5BKX8 364 aa9.36□□□□□ -0.91
CTNND1-204ENST00000361796 FSIP1Q8NA03 581 aa9.36□□□□□ -0.91
CTNND1-204ENST00000361796 CNNM3Q8NE01 707 aa9.36□□□□□ -0.91
CTNND1-204ENST00000361796 MMRN2Q9H8L6 949 aa9.36□□□□□ -0.91
CTNND1-204ENST00000361796 ATP5J2-PTCD1G3V325 749 aa9.36□□□□□ -0.91
CTNND1-204ENST00000361796 PRKCSHP14314 528 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-204ENST00000361796 FBLN1P23142 703 aa9.36□□□□□ -0.91
CTNND1-204ENST00000361796 TDRD12Q587J7 1177 aaKnown RBP9.36□□□□□ -0.91
CTNND1-204ENST00000361796 ANO10Q9NW15 660 aa9.36□□□□□ -0.91
CTNND1-204ENST00000361796 GOLIM4O00461 696 aa9.36□□□□□ -0.91
CTNND1-204ENST00000361796 ZNF213O14771 459 aa9.36□□□□□ -0.91
CTNND1-204ENST00000361796 NLRP5P59047 1200 aa9.36□□□□□ -0.91
CTNND1-204ENST00000361796 ZSWIM4Q9H7M6 989 aa9.36□□□□□ -0.91
CTNND1-204ENST00000361796 UBE4AQ14139 1066 aa9.36□□□□□ -0.91
CTNND1-204ENST00000361796 FKBP15Q5T1M5 1219 aa9.36□□□□□ -0.91
CTNND1-204ENST00000361796 ZNF830Q96NB3 372 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-204ENST00000361796 NESP48681 1621 aa9.35□□□□□ -0.91
CTNND1-204ENST00000361796 IFIT3O14879 490 aaKnown RBP9.35□□□□□ -0.91
CTNND1-204ENST00000361796 TTC16Q8NEE8 873 aa9.35□□□□□ -0.91
CTNND1-204ENST00000361796 TSG101Q99816 390 aa9.35□□□□□ -0.91
CTNND1-204ENST00000361796 TRMT112Q9UI30 125 aaKnown RBP9.35□□□□□ -0.91
CTNND1-204ENST00000361796 WWC3Q9ULE0 1092 aa9.35□□□□□ -0.91
CTNND1-204ENST00000361796 MAP3K2Q9Y2U5 619 aa9.35□□□□□ -0.91
CTNND1-204ENST00000361796 NKTRP30414 1462 aaKnown RBP9.35□□□□□ -0.91
CTNND1-204ENST00000361796 GRIN2BQ13224 1484 aa9.35□□□□□ -0.91
CTNND1-204ENST00000361796 ZPR1O75312 459 aa9.35□□□□□ -0.91
CTNND1-204ENST00000361796 ANKLE2Q86XL3 938 aa9.35□□□□□ -0.91
CTNND1-204ENST00000361796 TICAM2Q86XR7 235 aa9.35□□□□□ -0.91
CTNND1-204ENST00000361796 AKAP2Q9Y2D5 859 aa9.35□□□□□ -0.91
CTNND1-204ENST00000361796 ATAD2Q6PL18 1390 aa9.35□□□□□ -0.91
CTNND1-204ENST00000361796 EZRP15311 586 aaKnown RBP9.35□□□□□ -0.91
CTNND1-204ENST00000361796 RNF187Q5TA31 235 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-204ENST00000361796 LUZP1Q86V48 1076 aa9.35□□□□□ -0.91
CTNND1-204ENST00000361796 SUPT6HQ7KZ85 1726 aaKnown RBP9.35□□□□□ -0.91
CTNND1-204ENST00000361796 HECW1Q76N89 1606 aa9.35□□□□□ -0.91
CTNND1-204ENST00000361796 ANXA1P04083 346 aa9.35□□□□□ -0.91
CTNND1-204ENST00000361796 IFFO1Q0D2I5 559 aa9.35□□□□□ -0.91
CTNND1-204ENST00000361796 TBC1D9Q6ZT07 1266 aa9.35□□□□□ -0.91
CTNND1-204ENST00000361796 VTI1AQ96AJ9 217 aa9.35□□□□□ -0.91
CTNND1-204ENST00000361796 SRRTQ9BXP5 876 aaKnown RBP9.35□□□□□ -0.91
CTNND1-204ENST00000361796 TRIM27P14373 513 aa9.34□□□□□ -0.91
CTNND1-204ENST00000361796 IFIT5Q13325 482 aaKnown RBP9.34□□□□□ -0.91
CTNND1-204ENST00000361796 ADCY5O95622 1261 aa9.34□□□□□ -0.91
CTNND1-204ENST00000361796 IGHDP01880 384 aa9.34□□□□□ -0.91
CTNND1-204ENST00000361796 LARP1Q6PKG0 1096 aaKnown RBP9.34□□□□□ -0.91
CTNND1-204ENST00000361796 LRRC2Q9BYS8 371 aa9.34□□□□□ -0.91
CTNND1-204ENST00000361796 GSTTP1A0A1W2PQM5 241 aa9.34□□□□□ -0.91
CTNND1-204ENST00000361796 USP8P40818 1118 aa9.34□□□□□ -0.91
CTNND1-204ENST00000361796 ANAPC15P60006 121 aa9.34□□□□□ -0.91
CTNND1-204ENST00000361796 ZNF444Q8N0Y2 327 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-204ENST00000361796 PSMD1Q99460 953 aa9.34□□□□□ -0.91
CTNND1-204ENST00000361796 ZSCAN12O43309 604 aa9.34□□□□□ -0.91
CTNND1-204ENST00000361796 PPP1R12BO60237 982 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-204ENST00000361796 PRPF4BQ13523 1007 aaKnown RBP9.34□□□□□ -0.91
CTNND1-204ENST00000361796 CTCFLQ8NI51 663 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-204ENST00000361796 BEGAINQ9BUH8 593 aa9.34□□□□□ -0.91
CTNND1-204ENST00000361796 MICU3Q86XE3 530 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms