RNA–Protein interactions for RNA: ENST00000361587.3

HIPK1-202, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best)

Gene HIPK1, Length 5,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-202ENST00000361587 HOOK3Q86VS8 718 aa12.29□□□□□ -0.44
HIPK1-202ENST00000361587 NAPBQ9H115 298 aa12.29□□□□□ -0.44
HIPK1-202ENST00000361587 TROQ12816 1431 aaPredicted RBP12.29□□□□□ -0.44
HIPK1-202ENST00000361587 NF2P35240 595 aa12.28□□□□□ -0.44
HIPK1-202ENST00000361587 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.28□□□□□ -0.44
HIPK1-202ENST00000361587 SF3B2Q13435 895 aaKnown RBP12.28□□□□□ -0.44
HIPK1-202ENST00000361587 A0A087WZG4 1122 aa12.28□□□□□ -0.44
HIPK1-202ENST00000361587 GSTTP1A0A1W2PQM5 241 aa12.28□□□□□ -0.44
HIPK1-202ENST00000361587 AMPD3Q01432 767 aa12.28□□□□□ -0.44
HIPK1-202ENST00000361587 SSRP1Q08945 709 aaKnown RBP12.28□□□□□ -0.44
HIPK1-202ENST00000361587 MAP3K12Q12852 859 aa12.28□□□□□ -0.44
HIPK1-202ENST00000361587 KANK3Q6NY19 840 aa12.28□□□□□ -0.44
HIPK1-202ENST00000361587 IQCA1Q86XH1 822 aa12.28□□□□□ -0.44
HIPK1-202ENST00000361587 DDX12PQ92771 950 aa12.28□□□□□ -0.44
HIPK1-202ENST00000361587 CETN1Q12798 172 aa12.28□□□□□ -0.44
HIPK1-202ENST00000361587 NBPF8Q3BBV2 869 aa12.28□□□□□ -0.44
HIPK1-202ENST00000361587 DUSP27Q5VZP5 1158 aa12.28□□□□□ -0.44
HIPK1-202ENST00000361587 EHBP1Q8NDI1 1231 aa12.28□□□□□ -0.44
HIPK1-202ENST00000361587 NUP88Q99567 741 aaPredicted RBP12.28□□□□□ -0.44
HIPK1-202ENST00000361587 CCDC113Q9H0I3 377 aa12.28□□□□□ -0.44
HIPK1-202ENST00000361587 TNNT1P13805 278 aa12.28□□□□□ -0.44
HIPK1-202ENST00000361587 CCDC12Q8WUD4 166 aaPredicted RBP12.28□□□□□ -0.44
HIPK1-202ENST00000361587 PPM1EQ8WY54 764 aa12.28□□□□□ -0.44
HIPK1-202ENST00000361587 CUL5Q93034 780 aa12.28□□□□□ -0.44
HIPK1-202ENST00000361587 SLC12A7Q9Y666 1083 aa12.28□□□□□ -0.44
HIPK1-202ENST00000361587 SLF2Q8IX21 1173 aa12.27□□□□□ -0.45
HIPK1-202ENST00000361587 CNNM3Q8NE01 707 aa12.27□□□□□ -0.45
HIPK1-202ENST00000361587 CCDC175P0C221 793 aa12.27□□□□□ -0.45
HIPK1-202ENST00000361587 AMOTQ4VCS5 1084 aa12.27□□□□□ -0.45
HIPK1-202ENST00000361587 EXOC6BQ9Y2D4 811 aa12.27□□□□□ -0.45
HIPK1-202ENST00000361587 SUPT6HQ7KZ85 1726 aaKnown RBP12.27□□□□□ -0.45
HIPK1-202ENST00000361587 POLR3DP05423 398 aaPredicted RBP12.27□□□□□ -0.45
HIPK1-202ENST00000361587 LRRC27Q9C0I9 530 aa12.27□□□□□ -0.45
HIPK1-202ENST00000361587 MKNK2Q9HBH9 465 aa12.27□□□□□ -0.45
HIPK1-202ENST00000361587 PTPRCP08575 1304 aa12.26□□□□□ -0.45
HIPK1-202ENST00000361587 FERMT3Q86UX7 667 aa12.26□□□□□ -0.45
HIPK1-202ENST00000361587 SMARCC1Q92922 1105 aaPredicted RBP12.26□□□□□ -0.45
HIPK1-202ENST00000361587 FEZ1Q99689 392 aa12.26□□□□□ -0.45
HIPK1-202ENST00000361587 ANKRD18BA2A2Z9 1011 aa12.26□□□□□ -0.45
HIPK1-202ENST00000361587 SPECC1LQ69YQ0 1117 aa12.26□□□□□ -0.45
HIPK1-202ENST00000361587 STXBP4Q6ZWJ1 553 aa12.26□□□□□ -0.45
HIPK1-202ENST00000361587 PRDM11Q9NQV5 511 aa12.26□□□□□ -0.45
HIPK1-202ENST00000361587 POGZQ7Z3K3 1410 aa12.26□□□□□ -0.45
HIPK1-202ENST00000361587 CCDC194A0A1B0GVG4 234 aa12.26□□□□□ -0.45
HIPK1-202ENST00000361587 BAG4O95429 457 aaKnown RBP12.26□□□□□ -0.45
HIPK1-202ENST00000361587 SLC5A1P13866 664 aa12.26□□□□□ -0.45
HIPK1-202ENST00000361587 KLHL10Q6JEL2 608 aa12.26□□□□□ -0.45
HIPK1-202ENST00000361587 CC2D2AQ9P2K1 1620 aa12.25□□□□□ -0.45
HIPK1-202ENST00000361587 ZNF213O14771 459 aa12.25□□□□□ -0.45
HIPK1-202ENST00000361587 IFI16Q16666 785 aaKnown RBP12.25□□□□□ -0.45
HIPK1-202ENST00000361587 EVI5LQ96CN4 794 aa12.25□□□□□ -0.45
HIPK1-202ENST00000361587 GOPCQ9HD26 462 aa12.25□□□□□ -0.45
HIPK1-202ENST00000361587 PAXBP1Q9Y5B6 917 aa12.25□□□□□ -0.45
HIPK1-202ENST00000361587 ARAP1Q96P48 1450 aa12.25□□□□□ -0.45
HIPK1-202ENST00000361587 PRG4Q92954 1404 aaPredicted RBP12.25□□□□□ -0.45
HIPK1-202ENST00000361587 GOLGA8AA7E2F4 631 aa12.25□□□□□ -0.45
HIPK1-202ENST00000361587 GOLGA8BA8MQT2 603 aa12.25□□□□□ -0.45
HIPK1-202ENST00000361587 TDRD12Q587J7 1177 aaKnown RBP12.25□□□□□ -0.45
HIPK1-202ENST00000361587 ABCF2Q9UG63 623 aa12.25□□□□□ -0.45
HIPK1-202ENST00000361587 AQRO60306 1485 aaKnown RBP eCLIP12.25□□□□□ -0.457e-7■■■■□ 24.8
HIPK1-202ENST00000361587 POLR3GO15318 223 aaPredicted RBP12.25□□□□□ -0.45
HIPK1-202ENST00000361587 RARSP54136 660 aaKnown RBP12.25□□□□□ -0.45
HIPK1-202ENST00000361587 PRIMPOLQ96LW4 560 aa12.25□□□□□ -0.45
HIPK1-202ENST00000361587 TTC21AQ8NDW8 1320 aa12.25□□□□□ -0.45
HIPK1-202ENST00000361587 GOLIM4O00461 696 aa12.24□□□□□ -0.45
HIPK1-202ENST00000361587 ANKLE2Q86XL3 938 aa12.24□□□□□ -0.45
HIPK1-202ENST00000361587 CRACR2BQ8N4Y2 399 aaPredicted RBP12.24□□□□□ -0.45
HIPK1-202ENST00000361587 FSIP1Q8NA03 581 aa12.24□□□□□ -0.45
HIPK1-202ENST00000361587 CALML4Q96GE6 196 aa12.24□□□□□ -0.45
HIPK1-202ENST00000361587 HMG20BQ9P0W2 317 aa12.24□□□□□ -0.45
HIPK1-202ENST00000361587 RRS1Q15050 365 aaKnown RBP12.24□□□□□ -0.45
HIPK1-202ENST00000361587 TTF1Q15361 905 aaPredicted RBP12.24□□□□□ -0.45
HIPK1-202ENST00000361587 TAF7Q15545 349 aaPredicted RBP12.24□□□□□ -0.45
HIPK1-202ENST00000361587 CATIPQ7Z7H3 387 aa12.24□□□□□ -0.45
HIPK1-202ENST00000361587 BBXQ8WY36 941 aaPredicted RBP12.24□□□□□ -0.45
HIPK1-202ENST00000361587 ZNF444Q8N0Y2 327 aaPredicted RBP12.24□□□□□ -0.45
HIPK1-202ENST00000361587 TIAM1Q13009 1591 aa12.24□□□□□ -0.45
HIPK1-202ENST00000361587 BMS1Q14692 1282 aaKnown RBP12.24□□□□□ -0.45
HIPK1-202ENST00000361587 CCDC61Q9Y6R9 512 aa12.24□□□□□ -0.45
HIPK1-202ENST00000361587 CCDC171Q6TFL3 1326 aa12.23□□□□□ -0.45
HIPK1-202ENST00000361587 CTR9Q6PD62 1173 aa12.23□□□□□ -0.45
HIPK1-202ENST00000361587 PIBF1Q8WXW3 757 aa12.23□□□□□ -0.45
HIPK1-202ENST00000361587 LRPPRCP42704 1394 aaKnown RBP12.23□□□□□ -0.45
HIPK1-202ENST00000361587 MTIF2P46199 727 aaKnown RBP12.23□□□□□ -0.45
HIPK1-202ENST00000361587 RNF187Q5TA31 235 aaPredicted RBP12.23□□□□□ -0.45
HIPK1-202ENST00000361587 C6orf163Q5TEZ5 329 aa12.23□□□□□ -0.45
HIPK1-202ENST00000361587 DZIP1Q86YF9 867 aaKnown RBP12.23□□□□□ -0.45
HIPK1-202ENST00000361587 CCDC97Q96F63 343 aaPredicted RBP12.23□□□□□ -0.45
HIPK1-202ENST00000361587 HYPKQ9NX55 129 aa12.23□□□□□ -0.45
HIPK1-202ENST00000361587 KIF5BP33176 963 aa12.23□□□□□ -0.45
HIPK1-202ENST00000361587 NLRP5P59047 1200 aa12.23□□□□□ -0.45
HIPK1-202ENST00000361587 CKAP4Q07065 602 aaKnown RBP12.23□□□□□ -0.45
HIPK1-202ENST00000361587 SNW1Q13573 536 aaKnown RBP12.23□□□□□ -0.45
HIPK1-202ENST00000361587 SPECC1Q5M775 1068 aa12.23□□□□□ -0.45
HIPK1-202ENST00000361587 CEP63Q96MT8 703 aa12.23□□□□□ -0.45
HIPK1-202ENST00000361587 PHF23Q9BUL5 403 aaPredicted RBP12.23□□□□□ -0.45
HIPK1-202ENST00000361587 TCP11L1Q9NUJ3 509 aa12.23□□□□□ -0.45
HIPK1-202ENST00000361587 MINDY4BA8MYZ0 360 aa12.23□□□□□ -0.45
HIPK1-202ENST00000361587 CCDC172P0C7W6 258 aa12.23□□□□□ -0.45
HIPK1-202ENST00000361587 IFIT5Q13325 482 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms