RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 INTS5Q6P9B9 1019 aaKnown RBP8.54□□□□□ -1.04
CDC42SE2-201ENST00000360515 GNPATO15228 680 aa8.53□□□□□ -1.04
CDC42SE2-201ENST00000360515 ABHD8Q96I13 439 aa8.53□□□□□ -1.04
CDC42SE2-201ENST00000360515 IBTKQ9P2D0 1353 aaPredicted RBP8.53□□□□□ -1.04
CDC42SE2-201ENST00000360515 SOGA3Q5TF21 947 aa8.53□□□□□ -1.04
CDC42SE2-201ENST00000360515 RNF181Q9P0P0 153 aa8.53□□□□□ -1.04
CDC42SE2-201ENST00000360515 CA12O43570 354 aa8.52□□□□□ -1.04
CDC42SE2-201ENST00000360515 STYK1Q6J9G0 422 aa8.52□□□□□ -1.04
CDC42SE2-201ENST00000360515 C7orf43Q8WVR3 580 aa8.52□□□□□ -1.04
CDC42SE2-201ENST00000360515 TMOD3Q9NYL9 352 aa8.52□□□□□ -1.04
CDC42SE2-201ENST00000360515 BCS1LQ9Y276 419 aa8.52□□□□□ -1.05
CDC42SE2-201ENST00000360515 ZNF526Q8TF50 670 aaPredicted RBP8.52□□□□□ -1.05
CDC42SE2-201ENST00000360515 NARFQ9UHQ1 456 aa8.52□□□□□ -1.05
CDC42SE2-201ENST00000360515 AMPHP49418 695 aa8.51□□□□□ -1.05
CDC42SE2-201ENST00000360515 MAP2K1Q02750 393 aaPredicted RBP8.51□□□□□ -1.05
CDC42SE2-201ENST00000360515 KLHL34Q8N239 644 aa8.51□□□□□ -1.05
CDC42SE2-201ENST00000360515 ASAP1Q9ULH1 1129 aa8.51□□□□□ -1.05
CDC42SE2-201ENST00000360515 LAMB2P55268 1798 aa8.51□□□□□ -1.05
CDC42SE2-201ENST00000360515 ATP6V1AP38606 617 aa8.51□□□□□ -1.05
CDC42SE2-201ENST00000360515 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.51□□□□□ -1.05
CDC42SE2-201ENST00000360515 PGAP2Q9UHJ9 254 aa8.51□□□□□ -1.05
CDC42SE2-201ENST00000360515 ZBTB7CA1YPR0 619 aa8.51□□□□□ -1.05
CDC42SE2-201ENST00000360515 AMOTQ4VCS5 1084 aa8.51□□□□□ -1.05
CDC42SE2-201ENST00000360515 GRIPAP1Q4V328 841 aa8.5□□□□□ -1.05
CDC42SE2-201ENST00000360515 TMEM88BA6NKF7 163 aa8.5□□□□□ -1.05
CDC42SE2-201ENST00000360515 VPS33BQ9H267 617 aa8.5□□□□□ -1.05
CDC42SE2-201ENST00000360515 BCL2L12Q9HB09 334 aa8.5□□□□□ -1.05
CDC42SE2-201ENST00000360515 IQCA1LA6NCM1 817 aa8.5□□□□□ -1.05
CDC42SE2-201ENST00000360515 MLLT1Q03111 559 aaPredicted RBP8.5□□□□□ -1.05
CDC42SE2-201ENST00000360515 MAP2K2P36507 400 aa8.49□□□□□ -1.05
CDC42SE2-201ENST00000360515 MPRIPQ6WCQ1 1025 aa8.49□□□□□ -1.05
CDC42SE2-201ENST00000360515 SYTL4Q96C24 671 aaPredicted RBP8.49□□□□□ -1.05
CDC42SE2-201ENST00000360515 SAGE1Q9NXZ1 904 aa8.49□□□□□ -1.05
CDC42SE2-201ENST00000360515 HTRA3P83110 453 aa8.48□□□□□ -1.05
CDC42SE2-201ENST00000360515 HSP90AB2PQ58FF8 381 aa8.48□□□□□ -1.05
CDC42SE2-201ENST00000360515 TTLL6Q8N841 843 aa8.48□□□□□ -1.05
CDC42SE2-201ENST00000360515 COL15A1P39059 1388 aa8.48□□□□□ -1.05
CDC42SE2-201ENST00000360515 VEGFBP49765 207 aa8.48□□□□□ -1.05
CDC42SE2-201ENST00000360515 EYA1Q99502 592 aa8.48□□□□□ -1.05
CDC42SE2-201ENST00000360515 BRIP1Q9BX63 1249 aa8.48□□□□□ -1.05
CDC42SE2-201ENST00000360515 CDHR2Q9BYE9 1310 aa8.48□□□□□ -1.05
CDC42SE2-201ENST00000360515 MSH5O43196 834 aa8.47□□□□□ -1.05
CDC42SE2-201ENST00000360515 CRKLP46109 303 aaKnown RBP8.47□□□□□ -1.05
CDC42SE2-201ENST00000360515 FKBP8Q14318 412 aa8.47□□□□□ -1.05
CDC42SE2-201ENST00000360515 NOM1Q5C9Z4 860 aaKnown RBP8.47□□□□□ -1.05
CDC42SE2-201ENST00000360515 FZD9O00144 591 aa8.47□□□□□ -1.05
CDC42SE2-201ENST00000360515 RFC4P35249 363 aa8.47□□□□□ -1.05
CDC42SE2-201ENST00000360515 TAF1DQ9H5J8 278 aaPredicted RBP8.47□□□□□ -1.05
CDC42SE2-201ENST00000360515 COL4A5P29400 1685 aa8.47□□□□□ -1.05
CDC42SE2-201ENST00000360515 COL3A1P02461 1466 aaPredicted RBP8.47□□□□□ -1.05
CDC42SE2-201ENST00000360515 TNRC18O15417 2968 aaPredicted RBP8.47□□□□□ -1.05
CDC42SE2-201ENST00000360515 CYP19A1P11511 503 aaPredicted RBP8.47□□□□□ -1.05
CDC42SE2-201ENST00000360515 AKAP11Q9UKA4 1901 aa8.47□□□□□ -1.05
CDC42SE2-201ENST00000360515 NUP98P52948 1817 aa8.46□□□□□ -1.05
CDC42SE2-201ENST00000360515 CARMIL3Q8ND23 1372 aa8.46□□□□□ -1.05
CDC42SE2-201ENST00000360515 DPY19L2Q6NUT2 758 aa8.46□□□□□ -1.06
CDC42SE2-201ENST00000360515 PNMA8AQ86V59 439 aaPredicted RBP8.46□□□□□ -1.06
CDC42SE2-201ENST00000360515 AIDAQ96BJ3 306 aa8.46□□□□□ -1.06
CDC42SE2-201ENST00000360515 TLL2Q9Y6L7 1015 aa8.46□□□□□ -1.06
CDC42SE2-201ENST00000360515 WDR33Q9C0J8 1336 aaKnown RBP8.45□□□□□ -1.06
CDC42SE2-201ENST00000360515 A0A087WZG4 1122 aa8.45□□□□□ -1.06
CDC42SE2-201ENST00000360515 BRPF1P55201 1214 aaPredicted RBP8.45□□□□□ -1.06
CDC42SE2-201ENST00000360515 RASSF7Q02833 373 aa8.45□□□□□ -1.06
CDC42SE2-201ENST00000360515 CDCA8Q53HL2 280 aa8.45□□□□□ -1.06
CDC42SE2-201ENST00000360515 KIF7Q2M1P5 1343 aa8.45□□□□□ -1.06
CDC42SE2-201ENST00000360515 PHF14O94880 888 aa8.45□□□□□ -1.06
CDC42SE2-201ENST00000360515 PDE6BP35913 854 aa8.45□□□□□ -1.06
CDC42SE2-201ENST00000360515 EIF5P55010 431 aaKnown RBP8.45□□□□□ -1.06
CDC42SE2-201ENST00000360515 NFIXQ14938 502 aa8.45□□□□□ -1.06
CDC42SE2-201ENST00000360515 PSMD1Q99460 953 aa8.45□□□□□ -1.06
CDC42SE2-201ENST00000360515 CARD14Q9BXL6 1004 aa8.45□□□□□ -1.06
CDC42SE2-201ENST00000360515 POLKQ9UBT6 870 aa8.45□□□□□ -1.06
CDC42SE2-201ENST00000360515 SSC5DA1L4H1 1573 aa8.44□□□□□ -1.06
CDC42SE2-201ENST00000360515 FAM161AQ3B820 660 aa8.44□□□□□ -1.06
CDC42SE2-201ENST00000360515 PPARGC1BQ86YN6 1023 aaKnown RBP8.44□□□□□ -1.06
CDC42SE2-201ENST00000360515 PRPF38BQ5VTL8 546 aaKnown RBP8.43□□□□□ -1.06
CDC42SE2-201ENST00000360515 CFHR5Q9BXR6 569 aa8.43□□□□□ -1.06
CDC42SE2-201ENST00000360515 RRS1Q15050 365 aaKnown RBP8.43□□□□□ -1.06
CDC42SE2-201ENST00000360515 REM2Q8IYK8 340 aaPredicted RBP8.43□□□□□ -1.06
CDC42SE2-201ENST00000360515 PAPPA2Q9BXP8 1791 aa8.43□□□□□ -1.06
CDC42SE2-201ENST00000360515 EIF4A2Q14240 407 aaKnown RBP8.43□□□□□ -1.06
CDC42SE2-201ENST00000360515 CHRNA5P30532 468 aa8.42□□□□□ -1.06
CDC42SE2-201ENST00000360515 ECE1P42892 770 aa8.42□□□□□ -1.06
CDC42SE2-201ENST00000360515 FKBP4Q02790 459 aaKnown RBP eCLIP8.42□□□□□ -1.06
CDC42SE2-201ENST00000360515 PLEKHO1Q53GL0 409 aaPredicted RBP8.42□□□□□ -1.06
CDC42SE2-201ENST00000360515 CARD11Q9BXL7 1154 aa8.42□□□□□ -1.06
CDC42SE2-201ENST00000360515 GPC2Q8N158 579 aa8.42□□□□□ -1.06
CDC42SE2-201ENST00000360515 USHBP1Q8N6Y0 703 aa8.42□□□□□ -1.06
CDC42SE2-201ENST00000360515 CNKSR1Q969H4 720 aa8.42□□□□□ -1.06
CDC42SE2-201ENST00000360515 CEMIPQ8WUJ3 1361 aa8.42□□□□□ -1.06
CDC42SE2-201ENST00000360515 LBX1P52954 281 aa8.42□□□□□ -1.06
CDC42SE2-201ENST00000360515 H0YIN7 160 aa8.41□□□□□ -1.06
CDC42SE2-201ENST00000360515 SOX12O15370 315 aa8.41□□□□□ -1.06
CDC42SE2-201ENST00000360515 SERPINB2P05120 415 aa8.41□□□□□ -1.06
CDC42SE2-201ENST00000360515 SRGNP10124 158 aa8.41□□□□□ -1.06
CDC42SE2-201ENST00000360515 CC2D2BQ6DHV5 1058 aa8.41□□□□□ -1.06
CDC42SE2-201ENST00000360515 AKAP4Q5JQC9 854 aa8.41□□□□□ -1.06
CDC42SE2-201ENST00000360515 CLEC4GQ6UXB4 293 aa8.41□□□□□ -1.06
CDC42SE2-201ENST00000360515 USP50Q70EL3 339 aaPredicted RBP8.41□□□□□ -1.06
CDC42SE2-201ENST00000360515 COL4A1P02462 1669 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms