RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 DDB1Q16531 1140 aa17.72■□□□□ 0.43
PDLIM5-203ENST00000359265 EXOC6Q8TAG9 804 aa17.72■□□□□ 0.43
PDLIM5-203ENST00000359265 ARXQ96QS3 562 aa17.72■□□□□ 0.43
PDLIM5-203ENST00000359265 MTFR1LQ9H019 292 aa17.72■□□□□ 0.43
PDLIM5-203ENST00000359265 IPO8O15397 1037 aaKnown RBP17.71■□□□□ 0.43
PDLIM5-203ENST00000359265 C20orf194Q5TEA3 1177 aa17.71■□□□□ 0.43
PDLIM5-203ENST00000359265 PAPPAQ13219 1627 aa17.71■□□□□ 0.43
PDLIM5-203ENST00000359265 ITGB4P16144 1822 aa17.7■□□□□ 0.42
PDLIM5-203ENST00000359265 BTBD11A6QL63 1104 aa17.7■□□□□ 0.42
PDLIM5-203ENST00000359265 CACNB1Q02641 598 aaPredicted RBP17.7■□□□□ 0.42
PDLIM5-203ENST00000359265 NKX1-1Q15270 411 aaPredicted RBP17.7■□□□□ 0.42
PDLIM5-203ENST00000359265 SLC15A2Q16348 729 aa17.7■□□□□ 0.42
PDLIM5-203ENST00000359265 KRT24Q2M2I5 525 aa17.7■□□□□ 0.42
PDLIM5-203ENST00000359265 DDX54Q8TDD1 881 aaKnown RBP17.7■□□□□ 0.42
PDLIM5-203ENST00000359265 LAMB4A4D0S4 1761 aa17.69■□□□□ 0.42
PDLIM5-203ENST00000359265 HOXD11P31277 338 aaPredicted RBP17.69■□□□□ 0.42
PDLIM5-203ENST00000359265 MRPL50Q8N5N7 158 aaKnown RBP17.69■□□□□ 0.42
PDLIM5-203ENST00000359265 UBR2Q8IWV8 1755 aa17.68■□□□□ 0.42
PDLIM5-203ENST00000359265 C5P01031 1676 aa17.68■□□□□ 0.42
PDLIM5-203ENST00000359265 SLC52A2Q9HAB3 445 aa17.68■□□□□ 0.42
PDLIM5-203ENST00000359265 N4BP2Q86UW6 1770 aaPredicted RBP17.67■□□□□ 0.42
PDLIM5-203ENST00000359265 ATF7IPQ6VMQ6 1270 aa17.67■□□□□ 0.42
PDLIM5-203ENST00000359265 FTSJ3Q8IY81 847 aaKnown RBP17.67■□□□□ 0.42
PDLIM5-203ENST00000359265 STK32BQ9NY57 414 aa17.67■□□□□ 0.42
PDLIM5-203ENST00000359265 NOB1Q9ULX3 412 aaKnown RBP17.67■□□□□ 0.42
PDLIM5-203ENST00000359265 DOT1LQ8TEK3 1739 aa17.67■□□□□ 0.42
PDLIM5-203ENST00000359265 ERVV-2B6SEH9 535 aa17.66■□□□□ 0.42
PDLIM5-203ENST00000359265 CAPN15O75808 1086 aa17.66■□□□□ 0.42
PDLIM5-203ENST00000359265 HOXB7P09629 217 aa17.66■□□□□ 0.42
PDLIM5-203ENST00000359265 EIF4A1P60842 406 aaKnown RBP17.66■□□□□ 0.42
PDLIM5-203ENST00000359265 DZIP1LQ8IYY4 767 aaKnown RBP17.66■□□□□ 0.42
PDLIM5-203ENST00000359265 PELP1Q8IZL8 1130 aaKnown RBP17.66■□□□□ 0.42
PDLIM5-203ENST00000359265 CHMP4AQ9BY43 222 aa17.66■□□□□ 0.42
PDLIM5-203ENST00000359265 GOLGB1Q14789 3259 aaKnown RBP17.66■□□□□ 0.42
PDLIM5-203ENST00000359265 CABP4P57796 275 aa17.65■□□□□ 0.42
PDLIM5-203ENST00000359265 TXNRD1Q16881 649 aa17.65■□□□□ 0.42
PDLIM5-203ENST00000359265 PANK1Q8TE04 598 aa17.65■□□□□ 0.42
PDLIM5-203ENST00000359265 ARHGAP45Q92619 1136 aa17.65■□□□□ 0.42
PDLIM5-203ENST00000359265 CCDC136Q96JN2 1154 aa17.65■□□□□ 0.42
PDLIM5-203ENST00000359265 TRIM27P14373 513 aa17.64■□□□□ 0.41
PDLIM5-203ENST00000359265 CCDC30Q5VVM6 783 aa17.64■□□□□ 0.41
PDLIM5-203ENST00000359265 STK31Q9BXU1 1019 aa17.64■□□□□ 0.41
PDLIM5-203ENST00000359265 TCERG1O14776 1098 aaKnown RBP17.63■□□□□ 0.41
PDLIM5-203ENST00000359265 B4GALNT3Q6L9W6 998 aa17.63■□□□□ 0.41
PDLIM5-203ENST00000359265 API5Q9BZZ5 524 aaKnown RBP17.63■□□□□ 0.41
PDLIM5-203ENST00000359265 TNNQ9UQP3 1299 aa17.63■□□□□ 0.41
PDLIM5-203ENST00000359265 COG6Q9Y2V7 657 aa17.63■□□□□ 0.41
PDLIM5-203ENST00000359265 KAT6BQ8WYB5 2073 aa17.63■□□□□ 0.41
PDLIM5-203ENST00000359265 KCNQ3O43525 872 aa17.62■□□□□ 0.41
PDLIM5-203ENST00000359265 RLBP1P12271 317 aa17.62■□□□□ 0.41
PDLIM5-203ENST00000359265 AAMPQ13685 434 aa17.62■□□□□ 0.41
PDLIM5-203ENST00000359265 COL13A1Q5TAT6 717 aaPredicted RBP17.62■□□□□ 0.41
PDLIM5-203ENST00000359265 NFATC2IPQ8NCF5 419 aa17.62■□□□□ 0.41
PDLIM5-203ENST00000359265 CLUAP1Q96AJ1 413 aa17.62■□□□□ 0.41
PDLIM5-203ENST00000359265 ATP10DQ9P241 1426 aa17.62■□□□□ 0.41
PDLIM5-203ENST00000359265 YBX3P16989 372 aaKnown RBP eCLIP17.61■□□□□ 0.411e-7■■□□□ 14.3
PDLIM5-203ENST00000359265 MVPQ14764 893 aaKnown RBP17.61■□□□□ 0.41
PDLIM5-203ENST00000359265 ZNF790Q6PG37 636 aa17.61■□□□□ 0.41
PDLIM5-203ENST00000359265 PTPRCP08575 1304 aa17.61■□□□□ 0.41
PDLIM5-203ENST00000359265 HEG1Q9ULI3 1381 aa17.61■□□□□ 0.41
PDLIM5-203ENST00000359265 HDGFL1Q5TGJ6 251 aa17.6■□□□□ 0.41
PDLIM5-203ENST00000359265 TTC5Q8N0Z6 440 aa17.6■□□□□ 0.41
PDLIM5-203ENST00000359265 MARCH10Q8NA82 808 aaPredicted RBP17.6■□□□□ 0.41
PDLIM5-203ENST00000359265 NLGN2Q8NFZ4 835 aa17.6■□□□□ 0.41
PDLIM5-203ENST00000359265 TMOD3Q9NYL9 352 aa17.6■□□□□ 0.41
PDLIM5-203ENST00000359265 ABCC4O15439 1325 aa17.59■□□□□ 0.41
PDLIM5-203ENST00000359265 KLHL34Q8N239 644 aa17.59■□□□□ 0.41
PDLIM5-203ENST00000359265 DNAJC5GQ8N7S2 189 aa17.59■□□□□ 0.41
PDLIM5-203ENST00000359265 SLC4A2P04920 1241 aa17.58■□□□□ 0.4
PDLIM5-203ENST00000359265 ITPRIPQ8IWB1 547 aa17.58■□□□□ 0.4
PDLIM5-203ENST00000359265 DDX19BQ9UMR2 479 aa17.58■□□□□ 0.4
PDLIM5-203ENST00000359265 KCPQ6ZWJ8 1503 aa17.57■□□□□ 0.4
PDLIM5-203ENST00000359265 BCL9O00512 1426 aa17.57■□□□□ 0.4
PDLIM5-203ENST00000359265 SLC39A6Q13433 755 aa17.57■□□□□ 0.4
PDLIM5-203ENST00000359265 TMEM57Q8N5G2 664 aa17.57■□□□□ 0.4
PDLIM5-203ENST00000359265 GPBP1L1Q9HC44 474 aaPredicted RBP17.57■□□□□ 0.4
PDLIM5-203ENST00000359265 NHSQ6T4R5 1651 aa17.56■□□□□ 0.4
PDLIM5-203ENST00000359265 FMNL2Q96PY5 1086 aa17.56■□□□□ 0.4
PDLIM5-203ENST00000359265 CHMP4BQ9H444 224 aaKnown RBP17.56■□□□□ 0.4
PDLIM5-203ENST00000359265 EIF2S2P20042 333 aaKnown RBP17.55■□□□□ 0.4
PDLIM5-203ENST00000359265 ZNF526Q8TF50 670 aaPredicted RBP17.55■□□□□ 0.4
PDLIM5-203ENST00000359265 NECTIN2Q92692 538 aa17.55■□□□□ 0.4
PDLIM5-203ENST00000359265 SYTL4Q96C24 671 aaPredicted RBP17.55■□□□□ 0.4
PDLIM5-203ENST00000359265 PXDNLA1KZ92 1463 aa17.55■□□□□ 0.4
PDLIM5-203ENST00000359265 ZNF496Q96IT1 587 aaPredicted RBP17.54■□□□□ 0.4
PDLIM5-203ENST00000359265 SLC34A2O95436 690 aa17.53■□□□□ 0.4
PDLIM5-203ENST00000359265 SNRPA1P09661 255 aaKnown RBP17.53■□□□□ 0.4
PDLIM5-203ENST00000359265 PRELPP51888 382 aa17.53■□□□□ 0.4
PDLIM5-203ENST00000359265 FLIIQ13045 1269 aa17.53■□□□□ 0.4
PDLIM5-203ENST00000359265 CNKSR2Q8WXI2 1034 aa17.53■□□□□ 0.4
PDLIM5-203ENST00000359265 PRIM1P49642 420 aaKnown RBP17.52■□□□□ 0.4
PDLIM5-203ENST00000359265 ZNF827Q17R98 1081 aa17.52■□□□□ 0.4
PDLIM5-203ENST00000359265 G2E3Q7L622 706 aa17.52■□□□□ 0.4
PDLIM5-203ENST00000359265 PIGBQ92521 554 aa17.52■□□□□ 0.4
PDLIM5-203ENST00000359265 CHPF2Q9P2E5 772 aa17.52■□□□□ 0.4
PDLIM5-203ENST00000359265 DBF4Q9UBU7 674 aaPredicted RBP17.52■□□□□ 0.4
PDLIM5-203ENST00000359265 FKBP5Q13451 457 aaPredicted RBP17.51■□□□□ 0.39
PDLIM5-203ENST00000359265 GRIN3BO60391 1043 aa17.5■□□□□ 0.39
PDLIM5-203ENST00000359265 INTS3Q68E01 1043 aaKnown RBP17.5■□□□□ 0.39
PDLIM5-203ENST00000359265 ACSBG1Q96GR2 724 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms