RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 SLC4A9Q96Q91 983 aa13.67□□□□□ -0.22
TRAPPC4-201ENST00000359005 SYT17Q9BSW7 474 aa13.67□□□□□ -0.22
TRAPPC4-201ENST00000359005 API5Q9BZZ5 524 aaKnown RBP13.67□□□□□ -0.22
TRAPPC4-201ENST00000359005 DDX19BQ9UMR2 479 aa13.67□□□□□ -0.22
TRAPPC4-201ENST00000359005 CASZ1Q86V15 1759 aa13.67□□□□□ -0.22
TRAPPC4-201ENST00000359005 VAMP4O75379 141 aa13.66□□□□□ -0.22
TRAPPC4-201ENST00000359005 HSP90AB1P08238 724 aaKnown RBP13.66□□□□□ -0.22
TRAPPC4-201ENST00000359005 TEFQ10587 303 aa13.66□□□□□ -0.22
TRAPPC4-201ENST00000359005 ITPK1Q13572 414 aa13.66□□□□□ -0.22
TRAPPC4-201ENST00000359005 ZNF530Q6P9A1 599 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC4-201ENST00000359005 SSH1Q8WYL5 1049 aa13.66□□□□□ -0.22
TRAPPC4-201ENST00000359005 LINC00116Q8NCU8 138 aa13.65□□□□□ -0.22
TRAPPC4-201ENST00000359005 ARXQ96QS3 562 aa13.65□□□□□ -0.22
TRAPPC4-201ENST00000359005 THUMPD2Q9BTF0 503 aaKnown RBP13.65□□□□□ -0.22
TRAPPC4-201ENST00000359005 LOC102724428A0A0B4J2F2 783 aa13.64□□□□□ -0.23
TRAPPC4-201ENST00000359005 SIK1P57059 783 aa13.64□□□□□ -0.23
TRAPPC4-201ENST00000359005 DCTN1Q14203 1278 aa13.64□□□□□ -0.23
TRAPPC4-201ENST00000359005 CLUAP1Q96AJ1 413 aa13.64□□□□□ -0.23
TRAPPC4-201ENST00000359005 STK31Q9BXU1 1019 aa13.64□□□□□ -0.23
TRAPPC4-201ENST00000359005 TMOD3Q9NYL9 352 aa13.64□□□□□ -0.23
TRAPPC4-201ENST00000359005 HOXB7P09629 217 aa13.63□□□□□ -0.23
TRAPPC4-201ENST00000359005 MVPQ14764 893 aaKnown RBP13.63□□□□□ -0.23
TRAPPC4-201ENST00000359005 C20orf194Q5TEA3 1177 aa13.63□□□□□ -0.23
TRAPPC4-201ENST00000359005 MSL1Q68DK7 614 aa13.63□□□□□ -0.23
TRAPPC4-201ENST00000359005 NOB1Q9ULX3 412 aaKnown RBP13.63□□□□□ -0.23
TRAPPC4-201ENST00000359005 DOT1LQ8TEK3 1739 aa13.63□□□□□ -0.23
TRAPPC4-201ENST00000359005 PTPRCP08575 1304 aa13.63□□□□□ -0.23
TRAPPC4-201ENST00000359005 CCDC30Q5VVM6 783 aa13.62□□□□□ -0.23
TRAPPC4-201ENST00000359005 SLC16A10Q8TF71 515 aa13.62□□□□□ -0.23
TRAPPC4-201ENST00000359005 SMARCC1Q92922 1105 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC4-201ENST00000359005 BCL2L13Q9BXK5 485 aa13.62□□□□□ -0.23
TRAPPC4-201ENST00000359005 RWDD1Q9H446 243 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC4-201ENST00000359005 KDM6AO15550 1401 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC4-201ENST00000359005 CEMIPQ8WUJ3 1361 aa13.61□□□□□ -0.23
TRAPPC4-201ENST00000359005 ERVV-2B6SEH9 535 aa13.61□□□□□ -0.23
TRAPPC4-201ENST00000359005 MSH5O43196 834 aa13.61□□□□□ -0.23
TRAPPC4-201ENST00000359005 MRPL50Q8N5N7 158 aaKnown RBP13.61□□□□□ -0.23
TRAPPC4-201ENST00000359005 DCAF5Q96JK2 942 aa13.61□□□□□ -0.23
TRAPPC4-201ENST00000359005 LGR6Q9HBX8 967 aa13.61□□□□□ -0.23
TRAPPC4-201ENST00000359005 COG6Q9Y2V7 657 aa13.61□□□□□ -0.23
TRAPPC4-201ENST00000359005 TOGARAM1Q9Y4F4 1720 aa13.61□□□□□ -0.23
TRAPPC4-201ENST00000359005 ITPRIPQ8IWB1 547 aa13.6□□□□□ -0.23
TRAPPC4-201ENST00000359005 C8orf58Q8NAV2 365 aa13.6□□□□□ -0.23
TRAPPC4-201ENST00000359005 NFATC2IPQ8NCF5 419 aa13.6□□□□□ -0.23
TRAPPC4-201ENST00000359005 NLGN2Q8NFZ4 835 aa13.6□□□□□ -0.23
TRAPPC4-201ENST00000359005 PANK1Q8TE04 598 aa13.6□□□□□ -0.23
TRAPPC4-201ENST00000359005 PKD1L3Q7Z443 1732 aa13.59□□□□□ -0.23
TRAPPC4-201ENST00000359005 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.59□□□□□ -0.23
TRAPPC4-201ENST00000359005 TCERG1O14776 1098 aaKnown RBP13.59□□□□□ -0.23
TRAPPC4-201ENST00000359005 PHF14O94880 888 aa13.59□□□□□ -0.23
TRAPPC4-201ENST00000359005 TRIM27P14373 513 aa13.59□□□□□ -0.23
TRAPPC4-201ENST00000359005 ATP6V1AP38606 617 aa13.59□□□□□ -0.23
TRAPPC4-201ENST00000359005 IL17REQ8NFR9 667 aa13.59□□□□□ -0.23
TRAPPC4-201ENST00000359005 BTBD11A6QL63 1104 aa13.58□□□□□ -0.24
TRAPPC4-201ENST00000359005 ELL2O00472 640 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC4-201ENST00000359005 CABP4P57796 275 aa13.58□□□□□ -0.24
TRAPPC4-201ENST00000359005 RNMTO43148 476 aaKnown RBP13.57□□□□□ -0.24
TRAPPC4-201ENST00000359005 KLHL34Q8N239 644 aa13.57□□□□□ -0.24
TRAPPC4-201ENST00000359005 TSPYL6Q8N831 410 aa13.57□□□□□ -0.24
TRAPPC4-201ENST00000359005 AK7Q96M32 723 aa13.57□□□□□ -0.24
TRAPPC4-201ENST00000359005 RBM42Q9BTD8 480 aaKnown RBP13.57□□□□□ -0.24
TRAPPC4-201ENST00000359005 LY75O60449 1722 aa13.56□□□□□ -0.24
TRAPPC4-201ENST00000359005 PTCD1O75127 700 aaKnown RBP13.56□□□□□ -0.24
TRAPPC4-201ENST00000359005 POLD1P28340 1107 aa13.56□□□□□ -0.24
TRAPPC4-201ENST00000359005 CACNA1FO60840 1977 aa13.56□□□□□ -0.24
TRAPPC4-201ENST00000359005 GNPATO15228 680 aa13.55□□□□□ -0.24
TRAPPC4-201ENST00000359005 SLC39A6Q13433 755 aa13.55□□□□□ -0.24
TRAPPC4-201ENST00000359005 SLC4A2P04920 1241 aa13.54□□□□□ -0.24
TRAPPC4-201ENST00000359005 YY1P25490 414 aa13.54□□□□□ -0.24
TRAPPC4-201ENST00000359005 CCT4P50991 539 aaKnown RBP13.54□□□□□ -0.24
TRAPPC4-201ENST00000359005 ABCC4O15439 1325 aa13.54□□□□□ -0.24
TRAPPC4-201ENST00000359005 KDM2BQ8NHM5 1336 aa13.54□□□□□ -0.24
TRAPPC4-201ENST00000359005 SSFA2P28290 1259 aa13.53□□□□□ -0.24
TRAPPC4-201ENST00000359005 TTC5Q8N0Z6 440 aa13.53□□□□□ -0.24
TRAPPC4-201ENST00000359005 TMEM57Q8N5G2 664 aa13.53□□□□□ -0.24
TRAPPC4-201ENST00000359005 FLAD1Q8NFF5 587 aa13.53□□□□□ -0.24
TRAPPC4-201ENST00000359005 SLC52A2Q9HAB3 445 aa13.53□□□□□ -0.24
TRAPPC4-201ENST00000359005 ADAMTS7Q9UKP4 1686 aa13.53□□□□□ -0.24
TRAPPC4-201ENST00000359005 KDM3BQ7LBC6 1761 aa13.53□□□□□ -0.24
TRAPPC4-201ENST00000359005 RLBP1P12271 317 aa13.52□□□□□ -0.25
TRAPPC4-201ENST00000359005 EIF4A1P60842 406 aaKnown RBP13.52□□□□□ -0.25
TRAPPC4-201ENST00000359005 HDGFL1Q5TGJ6 251 aa13.52□□□□□ -0.25
TRAPPC4-201ENST00000359005 INTS3Q68E01 1043 aaKnown RBP13.52□□□□□ -0.25
TRAPPC4-201ENST00000359005 ARHGEF1Q92888 912 aaKnown RBP13.52□□□□□ -0.25
TRAPPC4-201ENST00000359005 MIS18AQ9NYP9 233 aa13.52□□□□□ -0.25
TRAPPC4-201ENST00000359005 HDAC5Q9UQL6 1122 aa13.52□□□□□ -0.25
TRAPPC4-201ENST00000359005 YBX3P16989 372 aaKnown RBP eCLIP13.51□□□□□ -0.25
TRAPPC4-201ENST00000359005 HDAC1Q13547 482 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC4-201ENST00000359005 RC3H1Q5TC82 1133 aaKnown RBP13.51□□□□□ -0.25
TRAPPC4-201ENST00000359005 INTS5Q6P9B9 1019 aaKnown RBP13.51□□□□□ -0.25
TRAPPC4-201ENST00000359005 DNAJC10Q8IXB1 793 aa13.51□□□□□ -0.25
TRAPPC4-201ENST00000359005 ITGB4P16144 1822 aa13.5□□□□□ -0.25
TRAPPC4-201ENST00000359005 SCN11AQ9UI33 1791 aa13.5□□□□□ -0.25
TRAPPC4-201ENST00000359005 ZBTB40Q9NUA8 1239 aa13.5□□□□□ -0.25
TRAPPC4-201ENST00000359005 DBF4Q9UBU7 674 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC4-201ENST00000359005 VIRMAQ69YN4 1812 aaKnown RBP13.5□□□□□ -0.25
TRAPPC4-201ENST00000359005 TUBGCP6Q96RT7 1819 aa13.5□□□□□ -0.25
TRAPPC4-201ENST00000359005 RPS6KA4O75676 772 aa13.49□□□□□ -0.25
TRAPPC4-201ENST00000359005 CRKLP46109 303 aaKnown RBP13.49□□□□□ -0.25
TRAPPC4-201ENST00000359005 GPR162Q16538 588 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms