RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 CCDC184Q52MB2 194 aa22.44■■□□□ 1.18
FAM3D-201ENST00000358781 ZBTB1Q9Y2K1 713 aa22.44■■□□□ 1.18
FAM3D-201ENST00000358781 LMOD3Q0VAK6 560 aa22.43■■□□□ 1.18
FAM3D-201ENST00000358781 PNISRQ8TF01 805 aaKnown RBP22.43■■□□□ 1.18
FAM3D-201ENST00000358781 MIS18AQ9NYP9 233 aa22.43■■□□□ 1.18
FAM3D-201ENST00000358781 RRP7AQ9Y3A4 280 aaKnown RBP22.43■■□□□ 1.18
FAM3D-201ENST00000358781 KDM3BQ7LBC6 1761 aa22.42■■□□□ 1.18
FAM3D-201ENST00000358781 GYS1P13807 737 aa22.41■■□□□ 1.18
FAM3D-201ENST00000358781 NLGN1Q8N2Q7 840 aa22.41■■□□□ 1.18
FAM3D-201ENST00000358781 USP42Q9H9J4 1324 aaKnown RBP22.41■■□□□ 1.18
FAM3D-201ENST00000358781 SNRPA1P09661 255 aaKnown RBP22.4■■□□□ 1.18
FAM3D-201ENST00000358781 NEUROD2Q15784 382 aa22.4■■□□□ 1.18
FAM3D-201ENST00000358781 KLHL34Q8N239 644 aa22.4■■□□□ 1.18
FAM3D-201ENST00000358781 SRP68Q9UHB9 627 aaKnown RBP22.4■■□□□ 1.18
FAM3D-201ENST00000358781 COL15A1P39059 1388 aa22.4■■□□□ 1.18
FAM3D-201ENST00000358781 CANXP27824 592 aaKnown RBP22.39■■□□□ 1.18
FAM3D-201ENST00000358781 MMP10P09238 476 aa22.38■■□□□ 1.17
FAM3D-201ENST00000358781 USP16Q9Y5T5 823 aa22.38■■□□□ 1.17
FAM3D-201ENST00000358781 PRAMEF22A3QJZ6 481 aa22.37■■□□□ 1.17
FAM3D-201ENST00000358781 EIF5P55010 431 aaKnown RBP22.37■■□□□ 1.17
FAM3D-201ENST00000358781 TRIM35Q9UPQ4 493 aa22.37■■□□□ 1.17
FAM3D-201ENST00000358781 ZPR1O75312 459 aa22.36■■□□□ 1.17
FAM3D-201ENST00000358781 A1BGP04217 495 aa22.36■■□□□ 1.17
FAM3D-201ENST00000358781 MRS2Q9HD23 443 aa22.36■■□□□ 1.17
FAM3D-201ENST00000358781 GOLGB1Q14789 3259 aaKnown RBP22.36■■□□□ 1.17
FAM3D-201ENST00000358781 EIF4A1P60842 406 aaKnown RBP22.35■■□□□ 1.17
FAM3D-201ENST00000358781 NARFQ9UHQ1 456 aa22.35■■□□□ 1.17
FAM3D-201ENST00000358781 CD2APQ9Y5K6 639 aa22.35■■□□□ 1.17
FAM3D-201ENST00000358781 IL6STP40189 918 aaPredicted RBP22.34■■□□□ 1.17
FAM3D-201ENST00000358781 FKBP8Q14318 412 aa22.34■■□□□ 1.17
FAM3D-201ENST00000358781 USPL1Q5W0Q7 1092 aa22.34■■□□□ 1.17
FAM3D-201ENST00000358781 NLGN2Q8NFZ4 835 aa22.34■■□□□ 1.17
FAM3D-201ENST00000358781 BABAM1Q9NWV8 329 aa22.34■■□□□ 1.17
FAM3D-201ENST00000358781 TSPYL4Q9UJ04 414 aa22.34■■□□□ 1.17
FAM3D-201ENST00000358781 A0A087WZG4 1122 aa22.33■■□□□ 1.17
FAM3D-201ENST00000358781 DCAF8L1A6NGE4 600 aa22.33■■□□□ 1.17
FAM3D-201ENST00000358781 APAF1O14727 1248 aa22.33■■□□□ 1.17
FAM3D-201ENST00000358781 LAMB4A4D0S4 1761 aa22.33■■□□□ 1.17
FAM3D-201ENST00000358781 UTRNP46939 3433 aa22.33■■□□□ 1.17
FAM3D-201ENST00000358781 GIGYF1O75420 1035 aaPredicted RBP22.32■■□□□ 1.16
FAM3D-201ENST00000358781 ZNF330Q9Y3S2 320 aaPredicted RBP22.31■■□□□ 1.16
FAM3D-201ENST00000358781 PARP3Q9Y6F1 533 aa22.31■■□□□ 1.16
FAM3D-201ENST00000358781 PIP4K2AP48426 406 aaPredicted RBP22.3■■□□□ 1.16
FAM3D-201ENST00000358781 BCL2L12Q9HB09 334 aa22.3■■□□□ 1.16
FAM3D-201ENST00000358781 NBPF26B4DH59 902 aa22.29■■□□□ 1.16
FAM3D-201ENST00000358781 CHL1O00533 1208 aa22.29■■□□□ 1.16
FAM3D-201ENST00000358781 TM4SF1P30408 202 aa22.29■■□□□ 1.16
FAM3D-201ENST00000358781 DDR1Q08345 913 aa22.29■■□□□ 1.16
FAM3D-201ENST00000358781 NBPF10Q6P3W6 841 aaKnown RBP22.29■■□□□ 1.16
FAM3D-201ENST00000358781 NPM2Q86SE8 214 aaKnown RBP22.29■■□□□ 1.16
FAM3D-201ENST00000358781 NBPF15Q8N660 670 aa22.29■■□□□ 1.16
FAM3D-201ENST00000358781 KIF13BQ9NQT8 1826 aa22.29■■□□□ 1.16
FAM3D-201ENST00000358781 SCN7AQ01118 1682 aa22.28■■□□□ 1.16
FAM3D-201ENST00000358781 TBC1D2BQ9UPU7 963 aa22.28■■□□□ 1.16
FAM3D-201ENST00000358781 C10orf71Q711Q0 1435 aa22.26■■□□□ 1.15
FAM3D-201ENST00000358781 POLRMTO00411 1230 aaKnown RBP22.26■■□□□ 1.15
FAM3D-201ENST00000358781 NFIXQ14938 502 aa22.26■■□□□ 1.15
FAM3D-201ENST00000358781 LAS1LQ9Y4W2 734 aaKnown RBP22.26■■□□□ 1.15
FAM3D-201ENST00000358781 CAMTA2O94983 1202 aa22.25■■□□□ 1.15
FAM3D-201ENST00000358781 DZIP3Q86Y13 1208 aaKnown RBP22.25■■□□□ 1.15
FAM3D-201ENST00000358781 BCORQ6W2J9 1755 aa22.24■■□□□ 1.15
FAM3D-201ENST00000358781 GPR162Q16538 588 aa22.24■■□□□ 1.15
FAM3D-201ENST00000358781 CFAP44Q96MT7 982 aa22.24■■□□□ 1.15
FAM3D-201ENST00000358781 CALD1Q05682 793 aaKnown RBP22.23■■□□□ 1.15
FAM3D-201ENST00000358781 PELP1Q8IZL8 1130 aaKnown RBP22.23■■□□□ 1.15
FAM3D-201ENST00000358781 AFDNP55196 1824 aaKnown RBP22.23■■□□□ 1.15
FAM3D-201ENST00000358781 KIAA1551Q9HCM1 1747 aa22.22■■□□□ 1.15
FAM3D-201ENST00000358781 NRXN2Q9P2S2 1712 aa22.21■■□□□ 1.15
FAM3D-201ENST00000358781 ZNF853P0CG23 659 aa22.21■■□□□ 1.15
FAM3D-201ENST00000358781 TGFB2P61812 414 aa22.21■■□□□ 1.15
FAM3D-201ENST00000358781 TBC1D9BQ66K14 1250 aa22.21■■□□□ 1.15
FAM3D-201ENST00000358781 IFT57Q9NWB7 429 aa22.21■■□□□ 1.15
FAM3D-201ENST00000358781 PXDNLA1KZ92 1463 aa22.21■■□□□ 1.15
FAM3D-201ENST00000358781 ERBB4Q15303 1308 aa22.2■■□□□ 1.15
FAM3D-201ENST00000358781 BICDL1Q6ZP65 573 aa22.2■■□□□ 1.14
FAM3D-201ENST00000358781 N4BP2Q86UW6 1770 aaPredicted RBP22.19■■□□□ 1.14
FAM3D-201ENST00000358781 SERPINB2P05120 415 aa22.19■■□□□ 1.14
FAM3D-201ENST00000358781 YBX3P16989 372 aaKnown RBP eCLIP22.19■■□□□ 1.14
FAM3D-201ENST00000358781 GNAI1P63096 354 aa22.19■■□□□ 1.14
FAM3D-201ENST00000358781 CCDC27Q2M243 656 aa22.19■■□□□ 1.14
FAM3D-201ENST00000358781 KRT24Q2M2I5 525 aa22.19■■□□□ 1.14
FAM3D-201ENST00000358781 MBIPQ9NS73 344 aa22.19■■□□□ 1.14
FAM3D-201ENST00000358781 SENP3-EIF4A1A0A087X0R7 540 aa22.18■■□□□ 1.14
FAM3D-201ENST00000358781 RGL2O15211 777 aa22.18■■□□□ 1.14
FAM3D-201ENST00000358781 MYL6BP14649 208 aa22.18■■□□□ 1.14
FAM3D-201ENST00000358781 EIF2S2P20042 333 aaKnown RBP22.18■■□□□ 1.14
FAM3D-201ENST00000358781 NCBP3Q53F19 620 aaKnown RBP22.18■■□□□ 1.14
FAM3D-201ENST00000358781 CLEC4GQ6UXB4 293 aa22.18■■□□□ 1.14
FAM3D-201ENST00000358781 FAM9BQ8IZU0 186 aa22.17■■□□□ 1.14
FAM3D-201ENST00000358781 NGEFQ8N5V2 710 aa22.17■■□□□ 1.14
FAM3D-201ENST00000358781 ZNF652Q9Y2D9 606 aa22.17■■□□□ 1.14
FAM3D-201ENST00000358781 CARMIL3Q8ND23 1372 aa22.16■■□□□ 1.14
FAM3D-201ENST00000358781 A0A0G2JLW4 131 aa22.16■■□□□ 1.14
FAM3D-201ENST00000358781 PDIA6Q15084 440 aa22.16■■□□□ 1.14
FAM3D-201ENST00000358781 WWC1Q8IX03 1113 aa22.16■■□□□ 1.14
FAM3D-201ENST00000358781 SETDB2Q96T68 719 aa22.16■■□□□ 1.14
FAM3D-201ENST00000358781 HOXB7P09629 217 aa22.15■■□□□ 1.14
FAM3D-201ENST00000358781 DPEP1P16444 411 aa22.15■■□□□ 1.14
FAM3D-201ENST00000358781 CHD4Q14839 1912 aa22.15■■□□□ 1.14
FAM3D-201ENST00000358781 GRIN3BO60391 1043 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms