RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 CWC22Q9HCG8 908 aaKnown RBP17.14■□□□□ 0.34
SIRPA-202ENST00000358771 LRRC7Q96NW7 1537 aa17.14■□□□□ 0.34
SIRPA-202ENST00000358771 WASHC4Q2M389 1173 aa17.14■□□□□ 0.33
SIRPA-202ENST00000358771 ZBTB3Q9H5J0 574 aa17.14■□□□□ 0.33
SIRPA-202ENST00000358771 ESYT1Q9BSJ8 1104 aa17.14■□□□□ 0.33
SIRPA-202ENST00000358771 HYPKQ9NX55 129 aa17.14■□□□□ 0.33
SIRPA-202ENST00000358771 A0A087WZG4 1122 aa17.13■□□□□ 0.33
SIRPA-202ENST00000358771 DRC7Q8IY82 874 aa17.13■□□□□ 0.33
SIRPA-202ENST00000358771 CD2BP2O95400 341 aaKnown RBP17.13■□□□□ 0.33
SIRPA-202ENST00000358771 APPP05067 770 aa17.13■□□□□ 0.33
SIRPA-202ENST00000358771 SNX21Q969T3 373 aa17.13■□□□□ 0.33
SIRPA-202ENST00000358771 NLRP1Q9C000 1473 aa17.13■□□□□ 0.33
SIRPA-202ENST00000358771 RNMTO43148 476 aaKnown RBP17.13■□□□□ 0.33
SIRPA-202ENST00000358771 BAG4O95429 457 aaKnown RBP17.13■□□□□ 0.33
SIRPA-202ENST00000358771 IFNL2Q8IZJ0 200 aa17.13■□□□□ 0.33
SIRPA-202ENST00000358771 USP44Q9H0E7 712 aa17.13■□□□□ 0.33
SIRPA-202ENST00000358771 C19orf44Q9H6X5 657 aa17.13■□□□□ 0.33
SIRPA-202ENST00000358771 CDK12Q9NYV4 1490 aaPredicted RBP17.12■□□□□ 0.33
SIRPA-202ENST00000358771 KLHDC4Q8TBB5 520 aa17.12■□□□□ 0.33
SIRPA-202ENST00000358771 ATP6V1DQ9Y5K8 247 aa17.12■□□□□ 0.33
SIRPA-202ENST00000358771 CYP46A1Q9Y6A2 500 aa17.12■□□□□ 0.33
SIRPA-202ENST00000358771 TCEANC2Q96MN5 208 aa17.12■□□□□ 0.33
SIRPA-202ENST00000358771 GTF2E1P29083 439 aaPredicted RBP17.12■□□□□ 0.33
SIRPA-202ENST00000358771 TMX3Q96JJ7 454 aa17.12■□□□□ 0.33
SIRPA-202ENST00000358771 ECHDC1Q9NTX5 307 aa17.12■□□□□ 0.33
SIRPA-202ENST00000358771 IGSF1Q8N6C5 1336 aa17.11■□□□□ 0.33
SIRPA-202ENST00000358771 ARHGEF10O15013 1369 aa17.11■□□□□ 0.33
SIRPA-202ENST00000358771 CLTCQ00610 1675 aaKnown RBP17.11■□□□□ 0.33
SIRPA-202ENST00000358771 GNL2Q13823 731 aaKnown RBP17.11■□□□□ 0.33
SIRPA-202ENST00000358771 KIAA0232Q92628 1395 aa17.11■□□□□ 0.33
SIRPA-202ENST00000358771 FERMT3Q86UX7 667 aa17.11■□□□□ 0.33
SIRPA-202ENST00000358771 CCDC83Q8IWF9 413 aa17.11■□□□□ 0.33
SIRPA-202ENST00000358771 BRPF1P55201 1214 aaPredicted RBP17.11■□□□□ 0.33
SIRPA-202ENST00000358771 KSR2Q6VAB6 950 aa17.11■□□□□ 0.33
SIRPA-202ENST00000358771 ARID3AQ99856 593 aa17.11■□□□□ 0.33
SIRPA-202ENST00000358771 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.11■□□□□ 0.33
SIRPA-202ENST00000358771 KDM4AO75164 1064 aa17.1■□□□□ 0.33
SIRPA-202ENST00000358771 EIF4A1P60842 406 aaKnown RBP17.1■□□□□ 0.33
SIRPA-202ENST00000358771 ANKRD13DQ6ZTN6 518 aa17.1■□□□□ 0.33
SIRPA-202ENST00000358771 CPSF1Q10570 1443 aaKnown RBP17.1■□□□□ 0.33
SIRPA-202ENST00000358771 PPLO60437 1756 aa17.1■□□□□ 0.33
SIRPA-202ENST00000358771 GRM8O00222 908 aa17.1■□□□□ 0.33
SIRPA-202ENST00000358771 FKBP4Q02790 459 aaKnown RBP eCLIP17.1■□□□□ 0.33
SIRPA-202ENST00000358771 SOS1Q07889 1333 aaPredicted RBP17.1■□□□□ 0.33
SIRPA-202ENST00000358771 IQSEC2Q5JU85 1478 aa17.1■□□□□ 0.33
SIRPA-202ENST00000358771 CPS1P31327 1500 aa17.1■□□□□ 0.33
SIRPA-202ENST00000358771 PRAMEF22A3QJZ6 481 aa17.09■□□□□ 0.33
SIRPA-202ENST00000358771 PDRG1Q9NUG6 133 aa17.09■□□□□ 0.33
SIRPA-202ENST00000358771 FMNL2Q96PY5 1086 aa17.09■□□□□ 0.33
SIRPA-202ENST00000358771 CHMLP26374 656 aa17.09■□□□□ 0.33
SIRPA-202ENST00000358771 PHF14O94880 888 aa17.08■□□□□ 0.33
SIRPA-202ENST00000358771 CPA1P15085 419 aa17.08■□□□□ 0.33
SIRPA-202ENST00000358771 CADPS2Q86UW7 1296 aa17.08■□□□□ 0.33
SIRPA-202ENST00000358771 MYOM1P52179 1685 aa17.08■□□□□ 0.32
SIRPA-202ENST00000358771 ZC3H13Q5T200 1668 aaKnown RBP17.08■□□□□ 0.32
SIRPA-202ENST00000358771 SYCE3A1L190 88 aa17.08■□□□□ 0.32
SIRPA-202ENST00000358771 RBM27Q9P2N5 1060 aaKnown RBP17.08■□□□□ 0.32
SIRPA-202ENST00000358771 PPFIA3O75145 1194 aa17.08■□□□□ 0.32
SIRPA-202ENST00000358771 XRCC6P12956 609 aaKnown RBP eCLIP17.08■□□□□ 0.32
SIRPA-202ENST00000358771 CEBPZQ03701 1054 aaKnown RBP17.08■□□□□ 0.32
SIRPA-202ENST00000358771 BLOC1S2Q6QNY1 142 aa17.07■□□□□ 0.32
SIRPA-202ENST00000358771 CD163L1Q9NR16 1453 aa17.07■□□□□ 0.32
SIRPA-202ENST00000358771 PSMA5P28066 241 aa17.06■□□□□ 0.32
SIRPA-202ENST00000358771 CSPP1Q1MSJ5 1256 aa17.06■□□□□ 0.32
SIRPA-202ENST00000358771 PROSER3Q2NL68 480 aa17.06■□□□□ 0.32
SIRPA-202ENST00000358771 BICD2Q8TD16 824 aa17.06■□□□□ 0.32
SIRPA-202ENST00000358771 SNRPA1P09661 255 aaKnown RBP17.06■□□□□ 0.32
SIRPA-202ENST00000358771 CHAMP1Q96JM3 812 aa17.06■□□□□ 0.32
SIRPA-202ENST00000358771 MYO3AQ8NEV4 1616 aa17.06■□□□□ 0.32
SIRPA-202ENST00000358771 RAB3GAP1Q15042 981 aa17.05■□□□□ 0.32
SIRPA-202ENST00000358771 LINS1Q8NG48 757 aa17.05■□□□□ 0.32
SIRPA-202ENST00000358771 FBXW7Q969H0 707 aa17.05■□□□□ 0.32
SIRPA-202ENST00000358771 WDR33Q9C0J8 1336 aaKnown RBP17.05■□□□□ 0.32
SIRPA-202ENST00000358771 SF3A1Q15459 793 aaKnown RBP17.05■□□□□ 0.32
SIRPA-202ENST00000358771 CCDC57Q2TAC2 916 aa17.05■□□□□ 0.32
SIRPA-202ENST00000358771 BICC1Q9H694 974 aaKnown RBP17.05■□□□□ 0.32
SIRPA-202ENST00000358771 PREX1Q8TCU6 1659 aa17.05■□□□□ 0.32
SIRPA-202ENST00000358771 GPTP24298 496 aa17.04■□□□□ 0.32
SIRPA-202ENST00000358771 LARP1BQ659C4 914 aaKnown RBP17.04■□□□□ 0.32
SIRPA-202ENST00000358771 ZNF790Q6PG37 636 aa17.04■□□□□ 0.32
SIRPA-202ENST00000358771 RIMBP3CA6NJZ7 1639 aa17.04■□□□□ 0.32
SIRPA-202ENST00000358771 RIMBP3BA6NNM3 1639 aa17.04■□□□□ 0.32
SIRPA-202ENST00000358771 RIMBP3Q9UFD9 1639 aa17.04■□□□□ 0.32
SIRPA-202ENST00000358771 HIP1O00291 1037 aa17.04■□□□□ 0.32
SIRPA-202ENST00000358771 UNC5CLQ8IV45 518 aa17.04■□□□□ 0.32
SIRPA-202ENST00000358771 NUTM2BA6NNL0 878 aaPredicted RBP17.04■□□□□ 0.32
SIRPA-202ENST00000358771 NUTM2EB1AL46 878 aaPredicted RBP17.04■□□□□ 0.32
SIRPA-202ENST00000358771 KIAA2012Q0VF49 1180 aa17.04■□□□□ 0.32
SIRPA-202ENST00000358771 NUTM2AQ8IVF1 878 aaPredicted RBP17.04■□□□□ 0.32
SIRPA-202ENST00000358771 DDX11Q96FC9 970 aa17.04■□□□□ 0.32
SIRPA-202ENST00000358771 ANTXR1Q9H6X2 564 aa17.04■□□□□ 0.32
SIRPA-202ENST00000358771 MED14O60244 1454 aa17.04■□□□□ 0.32
SIRPA-202ENST00000358771 MBD3O95983 291 aa17.04■□□□□ 0.32
SIRPA-202ENST00000358771 PKP1Q13835 747 aa17.04■□□□□ 0.32
SIRPA-202ENST00000358771 ZNF496Q96IT1 587 aaPredicted RBP17.04■□□□□ 0.32
SIRPA-202ENST00000358771 SNRKQ9NRH2 765 aa17.04■□□□□ 0.32
SIRPA-202ENST00000358771 DDX46Q7L014 1031 aaKnown RBP17.03■□□□□ 0.32
SIRPA-202ENST00000358771 NDUFB9Q9Y6M9 179 aa17.03■□□□□ 0.32
SIRPA-202ENST00000358771 NPHP3Q7Z494 1330 aa17.03■□□□□ 0.32
SIRPA-202ENST00000358771 KIF6Q6ZMV9 814 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms