RNA–Protein interactions for RNA: ENST00000358598.6

PRKAR1A-201, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAR1A, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-201ENST00000358598 G3BP1Q13283 466 aaKnown RBP eCLIP13.35□□□□□ -0.276e-9■■□□□ 13.1
PRKAR1A-201ENST00000358598 ESYT1Q9BSJ8 1104 aa13.35□□□□□ -0.27
PRKAR1A-201ENST00000358598 ARHGAP23Q9P227 1491 aa13.35□□□□□ -0.27
PRKAR1A-201ENST00000358598 UNC5CLQ8IV45 518 aa13.35□□□□□ -0.27
PRKAR1A-201ENST00000358598 SOS1Q07889 1333 aaPredicted RBP13.34□□□□□ -0.27
PRKAR1A-201ENST00000358598 NUCB2P80303 420 aa13.34□□□□□ -0.27
PRKAR1A-201ENST00000358598 HSP90AB4PQ58FF6 505 aa13.34□□□□□ -0.27
PRKAR1A-201ENST00000358598 GPATCH3Q96I76 525 aa13.34□□□□□ -0.27
PRKAR1A-201ENST00000358598 SLIT1O75093 1534 aa13.34□□□□□ -0.27
PRKAR1A-201ENST00000358598 AACSQ86V21 672 aa13.33□□□□□ -0.27
PRKAR1A-201ENST00000358598 CNTROBQ8N137 903 aa13.33□□□□□ -0.27
PRKAR1A-201ENST00000358598 DDX54Q8TDD1 881 aaKnown RBP13.33□□□□□ -0.27
PRKAR1A-201ENST00000358598 PANK2Q9BZ23 570 aa13.33□□□□□ -0.27
PRKAR1A-201ENST00000358598 SPG7Q9UQ90 795 aa13.33□□□□□ -0.27
PRKAR1A-201ENST00000358598 DLG5Q8TDM6 1919 aa13.33□□□□□ -0.27
PRKAR1A-201ENST00000358598 RAB3GAP1Q15042 981 aa13.33□□□□□ -0.28
PRKAR1A-201ENST00000358598 TRIM44Q96DX7 344 aaPredicted RBP13.33□□□□□ -0.28
PRKAR1A-201ENST00000358598 CHMLP26374 656 aa13.33□□□□□ -0.28
PRKAR1A-201ENST00000358598 PEAK1Q9H792 1746 aa13.33□□□□□ -0.28
PRKAR1A-201ENST00000358598 PRPF40AO75400 957 aaKnown RBP13.32□□□□□ -0.28
PRKAR1A-201ENST00000358598 BABAM1Q9NWV8 329 aa13.32□□□□□ -0.28
PRKAR1A-201ENST00000358598 RIMS1Q86UR5 1692 aaKnown RBP13.32□□□□□ -0.28
PRKAR1A-201ENST00000358598 RAB11FIP3O75154 756 aa13.32□□□□□ -0.28
PRKAR1A-201ENST00000358598 PKP1Q13835 747 aa13.32□□□□□ -0.28
PRKAR1A-201ENST00000358598 CCDC8Q9H0W5 538 aaPredicted RBP13.32□□□□□ -0.28
PRKAR1A-201ENST00000358598 HDAC5Q9UQL6 1122 aa13.32□□□□□ -0.28
PRKAR1A-201ENST00000358598 GIGYF1O75420 1035 aaPredicted RBP13.32□□□□□ -0.28
PRKAR1A-201ENST00000358598 BEND3Q5T5X7 828 aa13.32□□□□□ -0.28
PRKAR1A-201ENST00000358598 CABP4P57796 275 aa13.31□□□□□ -0.28
PRKAR1A-201ENST00000358598 SKOR2Q2VWA4 1001 aaPredicted RBP13.31□□□□□ -0.28
PRKAR1A-201ENST00000358598 CAVIN1Q6NZI2 390 aaKnown RBP13.31□□□□□ -0.28
PRKAR1A-201ENST00000358598 KSR2Q6VAB6 950 aa13.31□□□□□ -0.28
PRKAR1A-201ENST00000358598 MYD88Q99836 296 aa13.31□□□□□ -0.28
PRKAR1A-201ENST00000358598 STRN4Q9NRL3 753 aa13.31□□□□□ -0.28
PRKAR1A-201ENST00000358598 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.31□□□□□ -0.28
PRKAR1A-201ENST00000358598 PALD1Q9ULE6 856 aa13.31□□□□□ -0.28
PRKAR1A-201ENST00000358598 NPHP4O75161 1426 aaPredicted RBP13.31□□□□□ -0.28
PRKAR1A-201ENST00000358598 KNDC1Q76NI1 1749 aa13.31□□□□□ -0.28
PRKAR1A-201ENST00000358598 BAG4O95429 457 aaKnown RBP13.31□□□□□ -0.28
PRKAR1A-201ENST00000358598 XRCC6P12956 609 aaKnown RBP eCLIP13.31□□□□□ -0.28
PRKAR1A-201ENST00000358598 SSH3Q8TE77 659 aa13.31□□□□□ -0.28
PRKAR1A-201ENST00000358598 CHAMP1Q96JM3 812 aa13.31□□□□□ -0.28
PRKAR1A-201ENST00000358598 PRDM11Q9NQV5 511 aa13.31□□□□□ -0.28
PRKAR1A-201ENST00000358598 HYPKQ9NX55 129 aa13.31□□□□□ -0.28
PRKAR1A-201ENST00000358598 AKAP12Q02952 1782 aa13.31□□□□□ -0.28
PRKAR1A-201ENST00000358598 IBTKQ9P2D0 1353 aaPredicted RBP13.3□□□□□ -0.28
PRKAR1A-201ENST00000358598 ATP5J2-PTCD1G3V325 749 aa13.3□□□□□ -0.28
PRKAR1A-201ENST00000358598 DTNBO60941 627 aa13.3□□□□□ -0.28
PRKAR1A-201ENST00000358598 PTCD1O75127 700 aaKnown RBP13.3□□□□□ -0.28
PRKAR1A-201ENST00000358598 TOM1L2Q6ZVM7 507 aa13.3□□□□□ -0.28
PRKAR1A-201ENST00000358598 COPS6Q7L5N1 327 aa13.3□□□□□ -0.28
PRKAR1A-201ENST00000358598 KLHDC4Q8TBB5 520 aa13.3□□□□□ -0.28
PRKAR1A-201ENST00000358598 XAGE3Q8WTP9 111 aa13.3□□□□□ -0.28
PRKAR1A-201ENST00000358598 TMX3Q96JJ7 454 aa13.3□□□□□ -0.28
PRKAR1A-201ENST00000358598 ADGRL3Q9HAR2 1447 aa13.29□□□□□ -0.28
PRKAR1A-201ENST00000358598 FER1L4A9Z1Z3 1794 aa13.29□□□□□ -0.28
PRKAR1A-201ENST00000358598 RGPD8O14715 1765 aaPredicted RBP13.29□□□□□ -0.28
PRKAR1A-201ENST00000358598 ZNF790Q6PG37 636 aa13.29□□□□□ -0.28
PRKAR1A-201ENST00000358598 PTMSP20962 102 aa13.29□□□□□ -0.28
PRKAR1A-201ENST00000358598 BOLA2Q9H3K6 86 aa13.29□□□□□ -0.28
PRKAR1A-201ENST00000358598 OSBPL3Q9H4L5 887 aa13.29□□□□□ -0.28
PRKAR1A-201ENST00000358598 GRPEL1Q9HAV7 217 aa13.29□□□□□ -0.28
PRKAR1A-201ENST00000358598 GRM8O00222 908 aa13.28□□□□□ -0.28
PRKAR1A-201ENST00000358598 MRE11P49959 708 aa13.28□□□□□ -0.28
PRKAR1A-201ENST00000358598 EVA1CP58658 441 aa13.28□□□□□ -0.28
PRKAR1A-201ENST00000358598 HOXB7P09629 217 aa13.28□□□□□ -0.28
PRKAR1A-201ENST00000358598 IFNL2Q8IZJ0 200 aa13.28□□□□□ -0.28
PRKAR1A-201ENST00000358598 GLRX3O76003 335 aaKnown RBP13.27□□□□□ -0.28
PRKAR1A-201ENST00000358598 RUFY2Q8WXA3 655 aa13.27□□□□□ -0.28
PRKAR1A-201ENST00000358598 ZNF496Q96IT1 587 aaPredicted RBP13.27□□□□□ -0.28
PRKAR1A-201ENST00000358598 FSD1Q9BTV5 496 aa13.27□□□□□ -0.28
PRKAR1A-201ENST00000358598 BICC1Q9H694 974 aaKnown RBP13.27□□□□□ -0.28
PRKAR1A-201ENST00000358598 CWC22Q9HCG8 908 aaKnown RBP13.27□□□□□ -0.28
PRKAR1A-201ENST00000358598 NRKQ7Z2Y5 1582 aa13.27□□□□□ -0.28
PRKAR1A-201ENST00000358598 LARP1Q6PKG0 1096 aaKnown RBP13.27□□□□□ -0.29
PRKAR1A-201ENST00000358598 ERBB3P21860 1342 aa13.27□□□□□ -0.29
PRKAR1A-201ENST00000358598 LINS1Q8NG48 757 aa13.27□□□□□ -0.29
PRKAR1A-201ENST00000358598 UBE3BQ7Z3V4 1068 aa13.26□□□□□ -0.29
PRKAR1A-201ENST00000358598 DDX21Q9NR30 783 aaKnown RBP eCLIP13.26□□□□□ -0.29
PRKAR1A-201ENST00000358598 ECHDC1Q9NTX5 307 aa13.26□□□□□ -0.29
PRKAR1A-201ENST00000358598 TMEM94Q12767 1356 aa13.26□□□□□ -0.29
PRKAR1A-201ENST00000358598 CPA1P15085 419 aa13.26□□□□□ -0.29
PRKAR1A-201ENST00000358598 SUCLG2Q96I99 432 aa13.26□□□□□ -0.29
PRKAR1A-201ENST00000358598 USP16Q9Y5T5 823 aa13.26□□□□□ -0.29
PRKAR1A-201ENST00000358598 CADPS2Q86UW7 1296 aa13.26□□□□□ -0.29
PRKAR1A-201ENST00000358598 ERC1Q8IUD2 1116 aa13.26□□□□□ -0.29
PRKAR1A-201ENST00000358598 PRPF40BQ6NWY9 871 aaKnown RBP13.25□□□□□ -0.29
PRKAR1A-201ENST00000358598 ANKRD13DQ6ZTN6 518 aa13.25□□□□□ -0.29
PRKAR1A-201ENST00000358598 NEUROD6Q96NK8 337 aa13.25□□□□□ -0.29
PRKAR1A-201ENST00000358598 ALDH1L1O75891 902 aa13.25□□□□□ -0.29
PRKAR1A-201ENST00000358598 FGD1P98174 961 aa13.25□□□□□ -0.29
PRKAR1A-201ENST00000358598 DNAJC2Q99543 621 aaKnown RBP13.25□□□□□ -0.29
PRKAR1A-201ENST00000358598 GDPD2Q9HCC8 539 aa13.25□□□□□ -0.29
PRKAR1A-201ENST00000358598 CASTP20810 708 aaKnown RBP13.25□□□□□ -0.29
PRKAR1A-201ENST00000358598 MCM2P49736 904 aa13.25□□□□□ -0.29
PRKAR1A-201ENST00000358598 SLC52A2Q9HAB3 445 aa13.25□□□□□ -0.29
PRKAR1A-201ENST00000358598 PIK3C2AO00443 1686 aa13.25□□□□□ -0.29
PRKAR1A-201ENST00000358598 NPHP3Q7Z494 1330 aa13.24□□□□□ -0.29
PRKAR1A-201ENST00000358598 ZKSCAN1P17029 563 aaPredicted RBP13.24□□□□□ -0.29
PRKAR1A-201ENST00000358598 JAKMIP1Q96N16 626 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms