RNA–Protein interactions for RNA: ENST00000358239.8

PPP1CA-202, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2 BASIC

Gene PPP1CA, Length 1,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-202ENST00000358239 N4BP2Q86UW6 1770 aaPredicted RBP27.17■■□□□ 1.94
PPP1CA-202ENST00000358239 MAPK8IP3Q9UPT6 1336 aa27.16■■□□□ 1.94
PPP1CA-202ENST00000358239 MCM10Q7L590 875 aa27.16■■□□□ 1.94
PPP1CA-202ENST00000358239 LAMB4A4D0S4 1761 aa27.16■■□□□ 1.94
PPP1CA-202ENST00000358239 BRCA1P38398 1863 aaKnown RBP27.15■■□□□ 1.94
PPP1CA-202ENST00000358239 COL15A1P39059 1388 aa27.15■■□□□ 1.94
PPP1CA-202ENST00000358239 AFDNP55196 1824 aaKnown RBP27.15■■□□□ 1.94
PPP1CA-202ENST00000358239 ZBTB1Q9Y2K1 713 aa27.14■■□□□ 1.94
PPP1CA-202ENST00000358239 ZPR1O75312 459 aa27.13■■□□□ 1.93
PPP1CA-202ENST00000358239 PELP1Q8IZL8 1130 aaKnown RBP27.13■■□□□ 1.93
PPP1CA-202ENST00000358239 SCN7AQ01118 1682 aa27.13■■□□□ 1.93
PPP1CA-202ENST00000358239 GRIN3BO60391 1043 aa27.12■■□□□ 1.93
PPP1CA-202ENST00000358239 NFE2L2Q16236 605 aa27.12■■□□□ 1.93
PPP1CA-202ENST00000358239 PARP3Q9Y6F1 533 aa27.12■■□□□ 1.93
PPP1CA-202ENST00000358239 C10orf71Q711Q0 1435 aa27.12■■□□□ 1.93
PPP1CA-202ENST00000358239 SRP68Q9UHB9 627 aaKnown RBP27.11■■□□□ 1.93
PPP1CA-202ENST00000358239 NARFQ9UHQ1 456 aa27.11■■□□□ 1.93
PPP1CA-202ENST00000358239 DCTN1Q14203 1278 aa27.1■■□□□ 1.93
PPP1CA-202ENST00000358239 NRXN2Q9P2S2 1712 aa27.1■■□□□ 1.93
PPP1CA-202ENST00000358239 BCORQ6W2J9 1755 aa27.09■■□□□ 1.93
PPP1CA-202ENST00000358239 A0A087WZG4 1122 aa27.09■■□□□ 1.93
PPP1CA-202ENST00000358239 TAF7Q15545 349 aaPredicted RBP27.09■■□□□ 1.93
PPP1CA-202ENST00000358239 CANXP27824 592 aaKnown RBP27.08■■□□□ 1.93
PPP1CA-202ENST00000358239 FKBP8Q14318 412 aa27.08■■□□□ 1.93
PPP1CA-202ENST00000358239 USPL1Q5W0Q7 1092 aa27.08■■□□□ 1.93
PPP1CA-202ENST00000358239 PRKRIP1Q9H875 184 aaPredicted RBP27.08■■□□□ 1.93
PPP1CA-202ENST00000358239 KCNQ3O43525 872 aa27.07■■□□□ 1.92
PPP1CA-202ENST00000358239 EIF5P55010 431 aaKnown RBP27.07■■□□□ 1.92
PPP1CA-202ENST00000358239 PNISRQ8TF01 805 aaKnown RBP27.07■■□□□ 1.92
PPP1CA-202ENST00000358239 ARFGEF1Q9Y6D6 1849 aa27.06■■□□□ 1.92
PPP1CA-202ENST00000358239 YBX3P16989 372 aaKnown RBP eCLIP27.06■■□□□ 1.926e-9■■■□□ 17.4
PPP1CA-202ENST00000358239 IL6STP40189 918 aaPredicted RBP27.06■■□□□ 1.92
PPP1CA-202ENST00000358239 TGFB2P61812 414 aa27.06■■□□□ 1.92
PPP1CA-202ENST00000358239 PXDNLA1KZ92 1463 aa27.06■■□□□ 1.92
PPP1CA-202ENST00000358239 SNRPA1P09661 255 aaKnown RBP27.05■■□□□ 1.92
PPP1CA-202ENST00000358239 TM4SF1P30408 202 aa27.03■■□□□ 1.92
PPP1CA-202ENST00000358239 WDR43Q15061 677 aaKnown RBP eCLIP27.03■■□□□ 1.92
PPP1CA-202ENST00000358239 NPM2Q86SE8 214 aaKnown RBP27.03■■□□□ 1.92
PPP1CA-202ENST00000358239 DLEC1Q9Y238 1755 aa27.02■■□□□ 1.92
PPP1CA-202ENST00000358239 DDR1Q08345 913 aa27.02■■□□□ 1.92
PPP1CA-202ENST00000358239 POLRMTO00411 1230 aaKnown RBP27■■□□□ 1.91
PPP1CA-202ENST00000358239 LMOD3Q0VAK6 560 aa27■■□□□ 1.91
PPP1CA-202ENST00000358239 USP16Q9Y5T5 823 aa26.99■■□□□ 1.91
PPP1CA-202ENST00000358239 A1BGP04217 495 aa26.98■■□□□ 1.91
PPP1CA-202ENST00000358239 RIPK4P57078 832 aa26.98■■□□□ 1.91
PPP1CA-202ENST00000358239 NFIXQ14938 502 aa26.98■■□□□ 1.91
PPP1CA-202ENST00000358239 BCL2L12Q9HB09 334 aa26.98■■□□□ 1.91
PPP1CA-202ENST00000358239 ZNF330Q9Y3S2 320 aaPredicted RBP26.98■■□□□ 1.91
PPP1CA-202ENST00000358239 TMPOP42166 694 aaKnown RBP26.97■■□□□ 1.91
PPP1CA-202ENST00000358239 RUNDC1Q96C34 613 aa26.96■■□□□ 1.91
PPP1CA-202ENST00000358239 MIS18AQ9NYP9 233 aa26.96■■□□□ 1.91
PPP1CA-202ENST00000358239 PRAMEF22A3QJZ6 481 aa26.95■■□□□ 1.9
PPP1CA-202ENST00000358239 THUMPD2Q9BTF0 503 aaKnown RBP26.95■■□□□ 1.9
PPP1CA-202ENST00000358239 ANKRD31Q8N7Z5 1873 aa26.94■■□□□ 1.9
PPP1CA-202ENST00000358239 A0A0G2JLW4 131 aa26.94■■□□□ 1.9
PPP1CA-202ENST00000358239 BABAM1Q9NWV8 329 aa26.94■■□□□ 1.9
PPP1CA-202ENST00000358239 TBC1D2BQ9UPU7 963 aa26.94■■□□□ 1.9
PPP1CA-202ENST00000358239 NUP98P52948 1817 aa26.94■■□□□ 1.9
PPP1CA-202ENST00000358239 ZNF316A6NFI3 1004 aaPredicted RBP26.93■■□□□ 1.9
PPP1CA-202ENST00000358239 DPEP1P16444 411 aa26.93■■□□□ 1.9
PPP1CA-202ENST00000358239 CCDC146Q8IYE0 955 aa26.92■■□□□ 1.9
PPP1CA-202ENST00000358239 ZNF784Q8NCA9 323 aaPredicted RBP26.92■■□□□ 1.9
PPP1CA-202ENST00000358239 ADAMTS8Q9UP79 889 aa26.92■■□□□ 1.9
PPP1CA-202ENST00000358239 GIGYF1O75420 1035 aaPredicted RBP26.91■■□□□ 1.9
PPP1CA-202ENST00000358239 SERPINB2P05120 415 aa26.91■■□□□ 1.9
PPP1CA-202ENST00000358239 EIF4A1P60842 406 aaKnown RBP26.91■■□□□ 1.9
PPP1CA-202ENST00000358239 DZIP3Q86Y13 1208 aaKnown RBP26.91■■□□□ 1.9
PPP1CA-202ENST00000358239 CARMIL3Q8ND23 1372 aa26.91■■□□□ 1.9
PPP1CA-202ENST00000358239 RGL2O15211 777 aa26.9■■□□□ 1.9
PPP1CA-202ENST00000358239 WWC3Q9ULE0 1092 aa26.9■■□□□ 1.9
PPP1CA-202ENST00000358239 CAMTA2O94983 1202 aa26.89■■□□□ 1.9
PPP1CA-202ENST00000358239 PIM2Q9P1W9 311 aa26.89■■□□□ 1.9
PPP1CA-202ENST00000358239 TSPYL4Q9UJ04 414 aa26.89■■□□□ 1.9
PPP1CA-202ENST00000358239 BCS1LQ9Y276 419 aa26.89■■□□□ 1.9
PPP1CA-202ENST00000358239 TBC1D9BQ66K14 1250 aa26.88■■□□□ 1.89
PPP1CA-202ENST00000358239 CLEC4GQ6UXB4 293 aa26.88■■□□□ 1.89
PPP1CA-202ENST00000358239 ZNF652Q9Y2D9 606 aa26.88■■□□□ 1.89
PPP1CA-202ENST00000358239 NBPF26B4DH59 902 aa26.87■■□□□ 1.89
PPP1CA-202ENST00000358239 KCNA3P22001 575 aa26.87■■□□□ 1.89
PPP1CA-202ENST00000358239 PIP4K2AP48426 406 aaPredicted RBP26.87■■□□□ 1.89
PPP1CA-202ENST00000358239 NBPF10Q6P3W6 841 aaKnown RBP26.87■■□□□ 1.89
PPP1CA-202ENST00000358239 BICDL1Q6ZP65 573 aa26.87■■□□□ 1.89
PPP1CA-202ENST00000358239 NBPF15Q8N660 670 aa26.87■■□□□ 1.89
PPP1CA-202ENST00000358239 RRP7AQ9Y3A4 280 aaKnown RBP26.87■■□□□ 1.89
PPP1CA-202ENST00000358239 SBF1O95248 1867 aa26.86■■□□□ 1.89
PPP1CA-202ENST00000358239 NEUROD2Q15784 382 aa26.86■■□□□ 1.89
PPP1CA-202ENST00000358239 SETDB2Q96T68 719 aa26.86■■□□□ 1.89
PPP1CA-202ENST00000358239 CACNA1SQ13698 1873 aa26.85■■□□□ 1.89
PPP1CA-202ENST00000358239 COL11A2P13942 1736 aaPredicted RBP26.85■■□□□ 1.89
PPP1CA-202ENST00000358239 DALRD3Q5D0E6 543 aaKnown RBP26.84■■□□□ 1.89
PPP1CA-202ENST00000358239 ERBB4Q15303 1308 aa26.84■■□□□ 1.89
PPP1CA-202ENST00000358239 ARFGEF2Q9Y6D5 1785 aa26.84■■□□□ 1.89
PPP1CA-202ENST00000358239 PDZRN3Q9UPQ7 1066 aa26.83■■□□□ 1.89
PPP1CA-202ENST00000358239 CHRNA5P30532 468 aa26.82■■□□□ 1.88
PPP1CA-202ENST00000358239 TRIM35Q9UPQ4 493 aa26.82■■□□□ 1.88
PPP1CA-202ENST00000358239 ADCY9O60503 1353 aa26.82■■□□□ 1.88
PPP1CA-202ENST00000358239 CCDC88AQ3V6T2 1871 aa26.81■■□□□ 1.88
PPP1CA-202ENST00000358239 PDE6BP35913 854 aa26.79■■□□□ 1.88
PPP1CA-202ENST00000358239 PRR5LQ6MZQ0 368 aa26.79■■□□□ 1.88
PPP1CA-202ENST00000358239 CNBD1Q8NA66 436 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms