RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 TTC21AQ8NDW8 1320 aa18.6■□□□□ 0.57
PTBP1-203ENST00000356948 SYCE3A1L190 88 aa18.6■□□□□ 0.57
PTBP1-203ENST00000356948 PROSER3Q2NL68 480 aa18.6■□□□□ 0.57
PTBP1-203ENST00000356948 CLEC17AQ6ZS10 378 aa18.6■□□□□ 0.57
PTBP1-203ENST00000356948 DIP2AQ14689 1571 aa18.59■□□□□ 0.57
PTBP1-203ENST00000356948 SRGAP3O43295 1099 aa18.59■□□□□ 0.57
PTBP1-203ENST00000356948 SPG7Q9UQ90 795 aa18.59■□□□□ 0.57
PTBP1-203ENST00000356948 NUCB2P80303 420 aa18.59■□□□□ 0.57
PTBP1-203ENST00000356948 PA2G4Q9UQ80 394 aaKnown RBP18.58■□□□□ 0.57
PTBP1-203ENST00000356948 NWD1Q149M9 1564 aa18.58■□□□□ 0.57
PTBP1-203ENST00000356948 LMOD2Q6P5Q4 547 aa18.58■□□□□ 0.57
PTBP1-203ENST00000356948 MAP3K5Q99683 1374 aa18.58■□□□□ 0.56
PTBP1-203ENST00000356948 GADD45BO75293 160 aaPredicted RBP18.58■□□□□ 0.56
PTBP1-203ENST00000356948 TBX22Q9Y458 520 aa18.58■□□□□ 0.56
PTBP1-203ENST00000356948 FMN2Q9NZ56 1722 aa18.58■□□□□ 0.56
PTBP1-203ENST00000356948 GNAI3P08754 354 aa18.57■□□□□ 0.56
PTBP1-203ENST00000356948 RASEFQ8IZ41 740 aa18.57■□□□□ 0.56
PTBP1-203ENST00000356948 CWC27Q6UX04 472 aaKnown RBP18.56■□□□□ 0.56
PTBP1-203ENST00000356948 CWF19L2Q2TBE0 894 aaKnown RBP18.56■□□□□ 0.56
PTBP1-203ENST00000356948 PI4K2BQ8TCG2 481 aa18.55■□□□□ 0.56
PTBP1-203ENST00000356948 RHPN1Q8TCX5 695 aa18.55■□□□□ 0.56
PTBP1-203ENST00000356948 EIF4A1P60842 406 aaKnown RBP18.55■□□□□ 0.56
PTBP1-203ENST00000356948 ESCO1Q5FWF5 840 aa18.55■□□□□ 0.56
PTBP1-203ENST00000356948 JARID2Q92833 1246 aaPredicted RBP18.54■□□□□ 0.56
PTBP1-203ENST00000356948 PIP4K2AP48426 406 aaPredicted RBP18.53■□□□□ 0.56
PTBP1-203ENST00000356948 SRCIN1Q9C0H9 1055 aa18.53■□□□□ 0.56
PTBP1-203ENST00000356948 XRN1Q8IZH2 1706 aaKnown RBP18.53■□□□□ 0.56
PTBP1-203ENST00000356948 SSH3Q8TE77 659 aa18.53■□□□□ 0.56
PTBP1-203ENST00000356948 MSNP26038 577 aaKnown RBP18.53■□□□□ 0.56
PTBP1-203ENST00000356948 ORAI2Q96SN7 254 aa18.52■□□□□ 0.56
PTBP1-203ENST00000356948 LARGE1O95461 756 aa18.52■□□□□ 0.56
PTBP1-203ENST00000356948 CWC22Q9HCG8 908 aaKnown RBP18.52■□□□□ 0.56
PTBP1-203ENST00000356948 AIMP1Q12904 312 aaKnown RBP18.52■□□□□ 0.55
PTBP1-203ENST00000356948 BEND3Q5T5X7 828 aa18.52■□□□□ 0.55
PTBP1-203ENST00000356948 KLHDC4Q8TBB5 520 aa18.52■□□□□ 0.55
PTBP1-203ENST00000356948 KIAA1211Q6ZU35 1233 aa18.51■□□□□ 0.55
PTBP1-203ENST00000356948 STAP2Q9UGK3 403 aa18.51■□□□□ 0.55
PTBP1-203ENST00000356948 PHF8Q9UPP1 1060 aa18.51■□□□□ 0.55
PTBP1-203ENST00000356948 FAM208AQ9UK61 1670 aaKnown RBP18.51■□□□□ 0.55
PTBP1-203ENST00000356948 ZNF445P59923 1031 aa18.51■□□□□ 0.55
PTBP1-203ENST00000356948 BTBD11A6QL63 1104 aa18.5■□□□□ 0.55
PTBP1-203ENST00000356948 BRD1O95696 1058 aa18.5■□□□□ 0.55
PTBP1-203ENST00000356948 ZNF530Q6P9A1 599 aaPredicted RBP18.5■□□□□ 0.55
PTBP1-203ENST00000356948 PRDM10Q9NQV6 1147 aa18.5■□□□□ 0.55
PTBP1-203ENST00000356948 AXIN2Q9Y2T1 843 aa18.5■□□□□ 0.55
PTBP1-203ENST00000356948 PTH1RQ03431 593 aa18.5■□□□□ 0.55
PTBP1-203ENST00000356948 ADCK5Q3MIX3 580 aa18.5■□□□□ 0.55
PTBP1-203ENST00000356948 THEMISQ8N1K5 641 aaPredicted RBP18.5■□□□□ 0.55
PTBP1-203ENST00000356948 MARF1Q9Y4F3 1742 aaKnown RBP18.49■□□□□ 0.55
PTBP1-203ENST00000356948 CHGBP05060 677 aa18.49■□□□□ 0.55
PTBP1-203ENST00000356948 PSME1Q06323 249 aa18.49■□□□□ 0.55
PTBP1-203ENST00000356948 DNAAF4Q8WXU2 420 aa18.49■□□□□ 0.55
PTBP1-203ENST00000356948 SNX14Q9Y5W7 946 aa18.49■□□□□ 0.55
PTBP1-203ENST00000356948 ADCY9O60503 1353 aa18.49■□□□□ 0.55
PTBP1-203ENST00000356948 OS9Q13438 667 aaPredicted RBP18.48■□□□□ 0.55
PTBP1-203ENST00000356948 PPP1R9BQ96SB3 815 aa18.48■□□□□ 0.55
PTBP1-203ENST00000356948 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.48■□□□□ 0.55
PTBP1-203ENST00000356948 CUL4AQ13619 759 aa18.48■□□□□ 0.55
PTBP1-203ENST00000356948 POLA2Q14181 598 aa18.48■□□□□ 0.55
PTBP1-203ENST00000356948 MAP3K2Q9Y2U5 619 aa18.48■□□□□ 0.55
PTBP1-203ENST00000356948 HTATSF1O43719 755 aaKnown RBP18.48■□□□□ 0.55
PTBP1-203ENST00000356948 SLC39A6Q13433 755 aa18.48■□□□□ 0.55
PTBP1-203ENST00000356948 TCEANC2Q96MN5 208 aa18.48■□□□□ 0.55
PTBP1-203ENST00000356948 R3HCC1Q9Y3T6 440 aaKnown RBP18.48■□□□□ 0.55
PTBP1-203ENST00000356948 SIL1Q9H173 461 aa18.47■□□□□ 0.55
PTBP1-203ENST00000356948 NDUFB9Q9Y6M9 179 aa18.47■□□□□ 0.55
PTBP1-203ENST00000356948 HSPA4P34932 840 aa18.47■□□□□ 0.55
PTBP1-203ENST00000356948 AK2P54819 239 aa18.47■□□□□ 0.55
PTBP1-203ENST00000356948 ISY1Q9ULR0 285 aaKnown RBP18.47■□□□□ 0.55
PTBP1-203ENST00000356948 TAF6LQ9Y6J9 622 aa18.47■□□□□ 0.55
PTBP1-203ENST00000356948 TUBGCP6Q96RT7 1819 aa18.47■□□□□ 0.55
PTBP1-203ENST00000356948 RGPD2P0DJD1 1756 aa18.47■□□□□ 0.55
PTBP1-203ENST00000356948 CCDC173Q0VFZ6 552 aa18.47■□□□□ 0.55
PTBP1-203ENST00000356948 DNTTIP2Q5QJE6 756 aaKnown RBP18.47■□□□□ 0.55
PTBP1-203ENST00000356948 IP6K1Q92551 441 aa18.47■□□□□ 0.55
PTBP1-203ENST00000356948 TLR7Q9NYK1 1049 aaKnown RBP18.47■□□□□ 0.55
PTBP1-203ENST00000356948 TEFQ10587 303 aa18.46■□□□□ 0.55
PTBP1-203ENST00000356948 RUFY3Q7L099 469 aa18.46■□□□□ 0.55
PTBP1-203ENST00000356948 USP48Q86UV5 1035 aa18.46■□□□□ 0.55
PTBP1-203ENST00000356948 DDX17Q92841 729 aaKnown RBP18.46■□□□□ 0.55
PTBP1-203ENST00000356948 CNPY2Q9Y2B0 182 aa18.46■□□□□ 0.55
PTBP1-203ENST00000356948 TCHHQ07283 1943 aa18.46■□□□□ 0.55
PTBP1-203ENST00000356948 PXDNQ92626 1479 aa18.46■□□□□ 0.55
PTBP1-203ENST00000356948 LSG1Q9H089 658 aaKnown RBP18.46■□□□□ 0.55
PTBP1-203ENST00000356948 SGSM2O43147 1006 aa18.46■□□□□ 0.55
PTBP1-203ENST00000356948 EDC3Q96F86 508 aaKnown RBP18.45■□□□□ 0.54
PTBP1-203ENST00000356948 CCDC8Q9H0W5 538 aaPredicted RBP18.45■□□□□ 0.54
PTBP1-203ENST00000356948 CEMIPQ8WUJ3 1361 aa18.45■□□□□ 0.54
PTBP1-203ENST00000356948 MCCP23508 829 aa18.45■□□□□ 0.54
PTBP1-203ENST00000356948 LRRC37A3O60309 1634 aa18.44■□□□□ 0.54
PTBP1-203ENST00000356948 ZHX1Q9UKY1 873 aaPredicted RBP18.44■□□□□ 0.54
PTBP1-203ENST00000356948 KAZALD1Q96I82 304 aa18.43■□□□□ 0.54
PTBP1-203ENST00000356948 FAM227BQ96M60 508 aa18.43■□□□□ 0.54
PTBP1-203ENST00000356948 RPAP1Q9BWH6 1393 aaPredicted RBP18.43■□□□□ 0.54
PTBP1-203ENST00000356948 ARHGAP23Q9P227 1491 aa18.43■□□□□ 0.54
PTBP1-203ENST00000356948 CASTP20810 708 aaKnown RBP18.43■□□□□ 0.54
PTBP1-203ENST00000356948 PTMSP20962 102 aa18.43■□□□□ 0.54
PTBP1-203ENST00000356948 PRPF40BQ6NWY9 871 aaKnown RBP18.43■□□□□ 0.54
PTBP1-203ENST00000356948 NECAB1Q8N987 351 aa18.43■□□□□ 0.54
PTBP1-203ENST00000356948 LRSAM1Q6UWE0 723 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms