RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 LINC00116Q8NCU8 138 aa20.69■□□□□ 0.9
FDPS-201ENST00000356657 FLAD1Q8NFF5 587 aa20.69■□□□□ 0.9
FDPS-201ENST00000356657 AKT1S1Q96B36 256 aa20.69■□□□□ 0.9
FDPS-201ENST00000356657 AK7Q96M32 723 aa20.69■□□□□ 0.9
FDPS-201ENST00000356657 ANO8Q9HCE9 1232 aaPredicted RBP20.69■□□□□ 0.9
FDPS-201ENST00000356657 CACNA1FO60840 1977 aa20.68■□□□□ 0.9
FDPS-201ENST00000356657 ADRA2BP18089 450 aa20.68■□□□□ 0.9
FDPS-201ENST00000356657 CRKLP46109 303 aaKnown RBP20.68■□□□□ 0.9
FDPS-201ENST00000356657 SLC15A2Q16348 729 aa20.68■□□□□ 0.9
FDPS-201ENST00000356657 TSR2Q969E8 191 aaKnown RBP20.68■□□□□ 0.9
FDPS-201ENST00000356657 CCDC87Q9NVE4 849 aa20.68■□□□□ 0.9
FDPS-201ENST00000356657 SSFA2P28290 1259 aa20.67■□□□□ 0.9
FDPS-201ENST00000356657 KCNQ4P56696 695 aa20.67■□□□□ 0.9
FDPS-201ENST00000356657 TUBGCP6Q96RT7 1819 aa20.67■□□□□ 0.9
FDPS-201ENST00000356657 DUSP27Q5VZP5 1158 aa20.66■□□□□ 0.9
FDPS-201ENST00000356657 TRMT2AQ8IZ69 625 aaKnown RBP20.66■□□□□ 0.9
FDPS-201ENST00000356657 SPINK5Q9NQ38 1064 aaPredicted RBP20.66■□□□□ 0.9
FDPS-201ENST00000356657 LRP5O75197 1615 aa20.66■□□□□ 0.9
FDPS-201ENST00000356657 RTCBQ9Y3I0 505 aaKnown RBP20.65■□□□□ 0.9
FDPS-201ENST00000356657 RPS6KA4O75676 772 aa20.64■□□□□ 0.89
FDPS-201ENST00000356657 CT47B1P0C2W7 299 aaPredicted RBP20.64■□□□□ 0.89
FDPS-201ENST00000356657 ZNF428Q96B54 188 aa20.64■□□□□ 0.89
FDPS-201ENST00000356657 TFCP2L1Q9NZI6 479 aa20.64■□□□□ 0.89
FDPS-201ENST00000356657 USP16Q9Y5T5 823 aa20.64■□□□□ 0.89
FDPS-201ENST00000356657 GNPATO15228 680 aa20.63■□□□□ 0.89
FDPS-201ENST00000356657 IL6STP40189 918 aaPredicted RBP20.63■□□□□ 0.89
FDPS-201ENST00000356657 TWISTNBQ3B726 338 aaPredicted RBP20.63■□□□□ 0.89
FDPS-201ENST00000356657 NPM2Q86SE8 214 aaKnown RBP20.63■□□□□ 0.89
FDPS-201ENST00000356657 ZNF827Q17R98 1081 aa20.62■□□□□ 0.89
FDPS-201ENST00000356657 HDGFL1Q5TGJ6 251 aa20.62■□□□□ 0.89
FDPS-201ENST00000356657 INTS5Q6P9B9 1019 aaKnown RBP20.62■□□□□ 0.89
FDPS-201ENST00000356657 C8orf58Q8NAV2 365 aa20.62■□□□□ 0.89
FDPS-201ENST00000356657 CASZ1Q86V15 1759 aa20.61■□□□□ 0.89
FDPS-201ENST00000356657 A0A087WZG4 1122 aa20.61■□□□□ 0.89
FDPS-201ENST00000356657 PRAMEF22A3QJZ6 481 aa20.61■□□□□ 0.89
FDPS-201ENST00000356657 EXOSC9Q06265 439 aaKnown RBP20.61■□□□□ 0.89
FDPS-201ENST00000356657 CCDC30Q5VVM6 783 aa20.61■□□□□ 0.89
FDPS-201ENST00000356657 CDCA7LQ96GN5 454 aa20.61■□□□□ 0.89
FDPS-201ENST00000356657 DBF4Q9UBU7 674 aaPredicted RBP20.61■□□□□ 0.89
FDPS-201ENST00000356657 ZBTB1Q9Y2K1 713 aa20.61■□□□□ 0.89
FDPS-201ENST00000356657 SRCAPQ6ZRS2 3230 aa20.6■□□□□ 0.89
FDPS-201ENST00000356657 KRT24Q2M2I5 525 aa20.6■□□□□ 0.89
FDPS-201ENST00000356657 C4AP0C0L4 1744 aa20.6■□□□□ 0.89
FDPS-201ENST00000356657 COL15A1P39059 1388 aa20.59■□□□□ 0.89
FDPS-201ENST00000356657 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.58■□□□□ 0.89
FDPS-201ENST00000356657 RGL2O15211 777 aa20.58■□□□□ 0.89
FDPS-201ENST00000356657 EIF2S2P20042 333 aaKnown RBP20.58■□□□□ 0.89
FDPS-201ENST00000356657 EIF5P55010 431 aaKnown RBP20.58■□□□□ 0.89
FDPS-201ENST00000356657 TRAPPC3LQ5T215 181 aa20.58■□□□□ 0.89
FDPS-201ENST00000356657 SLC16A10Q8TF71 515 aa20.58■□□□□ 0.89
FDPS-201ENST00000356657 DDX21Q9NR30 783 aaKnown RBP eCLIP20.58■□□□□ 0.89
FDPS-201ENST00000356657 PNPLA7Q6ZV29 1317 aa20.58■□□□□ 0.88
FDPS-201ENST00000356657 A1BGP04217 495 aa20.57■□□□□ 0.88
FDPS-201ENST00000356657 TSPYL6Q8N831 410 aa20.57■□□□□ 0.88
FDPS-201ENST00000356657 STK31Q9BXU1 1019 aa20.57■□□□□ 0.88
FDPS-201ENST00000356657 ELL2O00472 640 aaPredicted RBP20.56■□□□□ 0.88
FDPS-201ENST00000356657 VAMP4O75379 141 aa20.56■□□□□ 0.88
FDPS-201ENST00000356657 CANXP27824 592 aaKnown RBP20.56■□□□□ 0.88
FDPS-201ENST00000356657 HYPKQ9NX55 129 aa20.56■□□□□ 0.88
FDPS-201ENST00000356657 SCN7AQ01118 1682 aa20.56■□□□□ 0.88
FDPS-201ENST00000356657 NBPF26B4DH59 902 aa20.55■□□□□ 0.88
FDPS-201ENST00000356657 RFC4P35249 363 aa20.55■□□□□ 0.88
FDPS-201ENST00000356657 NBPF10Q6P3W6 841 aaKnown RBP20.55■□□□□ 0.88
FDPS-201ENST00000356657 NBPF15Q8N660 670 aa20.55■□□□□ 0.88
FDPS-201ENST00000356657 PDGFDQ9GZP0 370 aaPredicted RBP20.55■□□□□ 0.88
FDPS-201ENST00000356657 SPON1Q9HCB6 807 aa20.55■□□□□ 0.88
FDPS-201ENST00000356657 BCORQ6W2J9 1755 aa20.55■□□□□ 0.88
FDPS-201ENST00000356657 ZBTB7AO95365 584 aa20.54■□□□□ 0.88
FDPS-201ENST00000356657 PDIA6Q15084 440 aa20.54■□□□□ 0.88
FDPS-201ENST00000356657 CHPF2Q9P2E5 772 aa20.54■□□□□ 0.88
FDPS-201ENST00000356657 PHF14O94880 888 aa20.53■□□□□ 0.88
FDPS-201ENST00000356657 ARHGEF1Q92888 912 aaKnown RBP20.53■□□□□ 0.88
FDPS-201ENST00000356657 PPP1R1BQ9UD71 204 aaPredicted RBP20.53■□□□□ 0.88
FDPS-201ENST00000356657 ZPR1O75312 459 aa20.52■□□□□ 0.88
FDPS-201ENST00000356657 ALDH1L2Q3SY69 923 aa20.52■□□□□ 0.88
FDPS-201ENST00000356657 LRP10Q7Z4F1 713 aa20.52■□□□□ 0.88
FDPS-201ENST00000356657 COL23A1Q86Y22 540 aaPredicted RBP20.52■□□□□ 0.88
FDPS-201ENST00000356657 NARFQ9UHQ1 456 aa20.52■□□□□ 0.88
FDPS-201ENST00000356657 USP42Q9H9J4 1324 aaKnown RBP20.52■□□□□ 0.88
FDPS-201ENST00000356657 COL24A1Q17RW2 1714 aa20.52■□□□□ 0.87
FDPS-201ENST00000356657 MSH5O43196 834 aa20.51■□□□□ 0.87
FDPS-201ENST00000356657 YTHDC1Q96MU7 727 aaKnown RBP20.51■□□□□ 0.87
FDPS-201ENST00000356657 MYL6BP14649 208 aa20.5■□□□□ 0.87
FDPS-201ENST00000356657 KIF6Q6ZMV9 814 aa20.5■□□□□ 0.87
FDPS-201ENST00000356657 AMIGO3Q86WK7 504 aa20.5■□□□□ 0.87
FDPS-201ENST00000356657 DZIP3Q86Y13 1208 aaKnown RBP20.5■□□□□ 0.87
FDPS-201ENST00000356657 ZNF652Q9Y2D9 606 aa20.5■□□□□ 0.87
FDPS-201ENST00000356657 ZNF330Q9Y3S2 320 aaPredicted RBP20.5■□□□□ 0.87
FDPS-201ENST00000356657 ERVV-1B6SEH8 477 aa20.5■□□□□ 0.87
FDPS-201ENST00000356657 CLEC4GQ6UXB4 293 aa20.5■□□□□ 0.87
FDPS-201ENST00000356657 NECTIN2Q92692 538 aa20.5■□□□□ 0.87
FDPS-201ENST00000356657 MTFR1LQ9H019 292 aa20.5■□□□□ 0.87
FDPS-201ENST00000356657 ATF5Q9Y2D1 282 aaPredicted RBP20.5■□□□□ 0.87
FDPS-201ENST00000356657 NLGN1Q8N2Q7 840 aa20.49■□□□□ 0.87
FDPS-201ENST00000356657 DDX58O95786 925 aaKnown RBP20.48■□□□□ 0.87
FDPS-201ENST00000356657 PROSER3Q2NL68 480 aa20.48■□□□□ 0.87
FDPS-201ENST00000356657 MAP3K15Q6ZN16 1313 aa20.47■□□□□ 0.87
FDPS-201ENST00000356657 SLC4A2P04920 1241 aa20.47■□□□□ 0.87
FDPS-201ENST00000356657 PIP4K2AP48426 406 aaPredicted RBP20.47■□□□□ 0.87
FDPS-201ENST00000356657 BRPF1P55201 1214 aaPredicted RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms