RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 PRR36Q9H6K5 1346 aa16.71■□□□□ 0.27
SREBF1-202ENST00000355815 PKP1Q13835 747 aa16.71■□□□□ 0.27
SREBF1-202ENST00000355815 CWC22Q9HCG8 908 aaKnown RBP16.71■□□□□ 0.27
SREBF1-202ENST00000355815 STK11IPQ8N1F8 1099 aa16.7■□□□□ 0.26
SREBF1-202ENST00000355815 RHPN1Q8TCX5 695 aa16.7■□□□□ 0.26
SREBF1-202ENST00000355815 ZBTB9Q96C00 473 aa16.7■□□□□ 0.26
SREBF1-202ENST00000355815 DDX11Q96FC9 970 aa16.7■□□□□ 0.26
SREBF1-202ENST00000355815 MYD88Q99836 296 aa16.7■□□□□ 0.26
SREBF1-202ENST00000355815 USP26Q9BXU7 913 aa16.7■□□□□ 0.26
SREBF1-202ENST00000355815 KCNQ3O43525 872 aa16.7■□□□□ 0.26
SREBF1-202ENST00000355815 TATP17735 454 aaPredicted RBP16.7■□□□□ 0.26
SREBF1-202ENST00000355815 RASSF8Q8NHQ8 419 aa16.7■□□□□ 0.26
SREBF1-202ENST00000355815 PDILTQ8N807 584 aa16.7■□□□□ 0.26
SREBF1-202ENST00000355815 ZFP91Q96JP5 570 aaPredicted RBP16.7■□□□□ 0.26
SREBF1-202ENST00000355815 KAT6BQ8WYB5 2073 aa16.7■□□□□ 0.26
SREBF1-202ENST00000355815 SETQ01105 290 aaPredicted RBP16.7■□□□□ 0.26
SREBF1-202ENST00000355815 RNF20Q5VTR2 975 aa16.69■□□□□ 0.26
SREBF1-202ENST00000355815 C16orf45Q96MC5 204 aaPredicted RBP16.69■□□□□ 0.26
SREBF1-202ENST00000355815 CYP46A1Q9Y6A2 500 aa16.69■□□□□ 0.26
SREBF1-202ENST00000355815 CABP4P57796 275 aa16.69■□□□□ 0.26
SREBF1-202ENST00000355815 TOM1L2Q6ZVM7 507 aa16.68■□□□□ 0.26
SREBF1-202ENST00000355815 SMC2O95347 1197 aa16.68■□□□□ 0.26
SREBF1-202ENST00000355815 CCDC73Q6ZRK6 1079 aa16.68■□□□□ 0.26
SREBF1-202ENST00000355815 ORAI2Q96SN7 254 aa16.68■□□□□ 0.26
SREBF1-202ENST00000355815 PHF23Q9BUL5 403 aaPredicted RBP16.68■□□□□ 0.26
SREBF1-202ENST00000355815 HOXC9P31274 260 aa16.68■□□□□ 0.26
SREBF1-202ENST00000355815 NECAB1Q8N987 351 aa16.68■□□□□ 0.26
SREBF1-202ENST00000355815 KLHDC4Q8TBB5 520 aa16.68■□□□□ 0.26
SREBF1-202ENST00000355815 NBPF7P0C2Y1 421 aaPredicted RBP16.67■□□□□ 0.26
SREBF1-202ENST00000355815 RBM25P49756 843 aaKnown RBP16.67■□□□□ 0.26
SREBF1-202ENST00000355815 CAMK4Q16566 473 aa16.67■□□□□ 0.26
SREBF1-202ENST00000355815 HSP90B2PQ58FF3 399 aa16.67■□□□□ 0.26
SREBF1-202ENST00000355815 LARP1BQ659C4 914 aaKnown RBP16.67■□□□□ 0.26
SREBF1-202ENST00000355815 PDRG1Q9NUG6 133 aa16.67■□□□□ 0.26
SREBF1-202ENST00000355815 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.67■□□□□ 0.26
SREBF1-202ENST00000355815 E9PCH4 1651 aa16.67■□□□□ 0.26
SREBF1-202ENST00000355815 DDX17Q92841 729 aaKnown RBP16.67■□□□□ 0.26
SREBF1-202ENST00000355815 ESYT1Q9BSJ8 1104 aa16.67■□□□□ 0.26
SREBF1-202ENST00000355815 PPP6R1Q9UPN7 881 aa16.67■□□□□ 0.26
SREBF1-202ENST00000355815 UNC13BO14795 1591 aa16.67■□□□□ 0.26
SREBF1-202ENST00000355815 MCM2P49736 904 aa16.67■□□□□ 0.26
SREBF1-202ENST00000355815 ATP8B2P98198 1209 aa16.67■□□□□ 0.26
SREBF1-202ENST00000355815 FKBP4Q02790 459 aaKnown RBP eCLIP16.66■□□□□ 0.26
SREBF1-202ENST00000355815 ANKRD24Q8TF21 1146 aa16.66■□□□□ 0.26
SREBF1-202ENST00000355815 DBF4Q9UBU7 674 aaPredicted RBP16.66■□□□□ 0.26
SREBF1-202ENST00000355815 SNX21Q969T3 373 aa16.66■□□□□ 0.26
SREBF1-202ENST00000355815 MYOM2P54296 1465 aa16.66■□□□□ 0.26
SREBF1-202ENST00000355815 IL17REQ8NFR9 667 aa16.66■□□□□ 0.26
SREBF1-202ENST00000355815 TFIP11Q9UBB9 837 aaKnown RBP16.66■□□□□ 0.26
SREBF1-202ENST00000355815 PLXNC1O60486 1568 aa16.65■□□□□ 0.26
SREBF1-202ENST00000355815 POLR3GO15318 223 aaPredicted RBP16.65■□□□□ 0.26
SREBF1-202ENST00000355815 RAB3GAP1Q15042 981 aa16.65■□□□□ 0.26
SREBF1-202ENST00000355815 PRDM11Q9NQV5 511 aa16.65■□□□□ 0.26
SREBF1-202ENST00000355815 MADDQ8WXG6 1647 aa16.65■□□□□ 0.26
SREBF1-202ENST00000355815 UBE3BQ7Z3V4 1068 aa16.65■□□□□ 0.26
SREBF1-202ENST00000355815 EDC4Q6P2E9 1401 aaKnown RBP16.65■□□□□ 0.26
SREBF1-202ENST00000355815 GLRX3O76003 335 aaKnown RBP16.65■□□□□ 0.26
SREBF1-202ENST00000355815 IBSPP21815 317 aaPredicted RBP16.65■□□□□ 0.26
SREBF1-202ENST00000355815 NBPF6Q5VWK0 638 aa16.65■□□□□ 0.26
SREBF1-202ENST00000355815 NBPF4Q96M43 638 aa16.65■□□□□ 0.26
SREBF1-202ENST00000355815 TTC12Q9H892 705 aaPredicted RBP16.65■□□□□ 0.26
SREBF1-202ENST00000355815 H0YHG0 523 aa16.64■□□□□ 0.25
SREBF1-202ENST00000355815 KRT28Q7Z3Y7 464 aa16.64■□□□□ 0.25
SREBF1-202ENST00000355815 ANTXR1Q9H6X2 564 aa16.64■□□□□ 0.25
SREBF1-202ENST00000355815 NDUFB9Q9Y6M9 179 aa16.64■□□□□ 0.25
SREBF1-202ENST00000355815 WDR33Q9C0J8 1336 aaKnown RBP16.64■□□□□ 0.25
SREBF1-202ENST00000355815 RAB11FIP3O75154 756 aa16.64■□□□□ 0.25
SREBF1-202ENST00000355815 CCDC192P0DO97 292 aa16.64■□□□□ 0.25
SREBF1-202ENST00000355815 BLOC1S2Q6QNY1 142 aa16.64■□□□□ 0.25
SREBF1-202ENST00000355815 LRRC2Q9BYS8 371 aa16.64■□□□□ 0.25
SREBF1-202ENST00000355815 ZFYVE9O95405 1425 aa16.64■□□□□ 0.25
SREBF1-202ENST00000355815 FLT4P35916 1363 aa16.63■□□□□ 0.25
SREBF1-202ENST00000355815 KCNH5Q8NCM2 988 aa16.63■□□□□ 0.25
SREBF1-202ENST00000355815 ZBTB3Q9H5J0 574 aa16.63■□□□□ 0.25
SREBF1-202ENST00000355815 TRMT1Q9NXH9 659 aaKnown RBP16.63■□□□□ 0.25
SREBF1-202ENST00000355815 ABCC4O15439 1325 aa16.63■□□□□ 0.25
SREBF1-202ENST00000355815 GTF2E1P29083 439 aaPredicted RBP16.63■□□□□ 0.25
SREBF1-202ENST00000355815 NOM1Q5C9Z4 860 aaKnown RBP16.63■□□□□ 0.25
SREBF1-202ENST00000355815 VGLL3A8MV65 326 aa16.62■□□□□ 0.25
SREBF1-202ENST00000355815 PRIM1P49642 420 aaKnown RBP16.62■□□□□ 0.25
SREBF1-202ENST00000355815 COPS6Q7L5N1 327 aa16.62■□□□□ 0.25
SREBF1-202ENST00000355815 NFATC2IPQ8NCF5 419 aa16.62■□□□□ 0.25
SREBF1-202ENST00000355815 TSC1Q92574 1164 aa16.62■□□□□ 0.25
SREBF1-202ENST00000355815 MAP3K4Q9Y6R4 1608 aa16.62■□□□□ 0.25
SREBF1-202ENST00000355815 CPLX1O14810 134 aa16.62■□□□□ 0.25
SREBF1-202ENST00000355815 CLSTN1O94985 981 aa16.62■□□□□ 0.25
SREBF1-202ENST00000355815 GTF2F1P35269 517 aaKnown RBP eCLIP16.62■□□□□ 0.254e-8■■■■■ 117.5
SREBF1-202ENST00000355815 SNRKQ9NRH2 765 aa16.62■□□□□ 0.25
SREBF1-202ENST00000355815 CHMLP26374 656 aa16.62■□□□□ 0.25
SREBF1-202ENST00000355815 TNMDQ9H2S6 317 aa16.62■□□□□ 0.25
SREBF1-202ENST00000355815 A0A087WZG4 1122 aa16.62■□□□□ 0.25
SREBF1-202ENST00000355815 GUCY1B3Q02153 619 aa16.62■□□□□ 0.25
SREBF1-202ENST00000355815 ZSCAN23Q3MJ62 389 aa16.62■□□□□ 0.25
SREBF1-202ENST00000355815 CHMP4CQ96CF2 233 aa16.62■□□□□ 0.25
SREBF1-202ENST00000355815 ROBO2Q9HCK4 1378 aa16.61■□□□□ 0.25
SREBF1-202ENST00000355815 ECHDC1Q9NTX5 307 aa16.61■□□□□ 0.25
SREBF1-202ENST00000355815 PALD1Q9ULE6 856 aa16.61■□□□□ 0.25
SREBF1-202ENST00000355815 EFCAB6Q5THR3 1501 aa16.61■□□□□ 0.25
SREBF1-202ENST00000355815 DYNC1I1O14576 645 aa16.61■□□□□ 0.25
SREBF1-202ENST00000355815 GCP02774 474 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms