RNA–Protein interactions for RNA: ENST00000349721.7

SMARCA2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 5,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-203ENST00000349721 MICALL1Q8N3F8 863 aa17.23■□□□□ 0.35
SMARCA2-203ENST00000349721 SRRTQ9BXP5 876 aaKnown RBP17.23■□□□□ 0.35
SMARCA2-203ENST00000349721 JADE2Q9NQC1 790 aa17.23■□□□□ 0.35
SMARCA2-203ENST00000349721 SEC63Q9UGP8 760 aaKnown RBP17.23■□□□□ 0.35
SMARCA2-203ENST00000349721 TUBB4BP68371 445 aa17.23■□□□□ 0.35
SMARCA2-203ENST00000349721 CCDC121Q6ZUS5 278 aa17.23■□□□□ 0.35
SMARCA2-203ENST00000349721 TTC14Q96N46 770 aa17.23■□□□□ 0.35
SMARCA2-203ENST00000349721 A0A1W2PRG0 241 aa17.23■□□□□ 0.35
SMARCA2-203ENST00000349721 KIF4AO95239 1232 aa17.23■□□□□ 0.35
SMARCA2-203ENST00000349721 HMGB2P26583 209 aaKnown RBP17.23■□□□□ 0.35
SMARCA2-203ENST00000349721 CLCN1P35523 988 aa17.23■□□□□ 0.35
SMARCA2-203ENST00000349721 TMEM266Q2M3C6 531 aa17.23■□□□□ 0.35
SMARCA2-203ENST00000349721 MACROD2A1Z1Q3 448 aa17.23■□□□□ 0.35
SMARCA2-203ENST00000349721 ATP2C2O75185 946 aa17.23■□□□□ 0.35
SMARCA2-203ENST00000349721 ZNF287Q9HBT7 754 aa17.23■□□□□ 0.35
SMARCA2-203ENST00000349721 RAB11FIP3O75154 756 aa17.22■□□□□ 0.35
SMARCA2-203ENST00000349721 PPP4R3AQ6IN85 833 aa17.22■□□□□ 0.35
SMARCA2-203ENST00000349721 CTAGE15A4D2H0 777 aa17.22■□□□□ 0.35
SMARCA2-203ENST00000349721 CTAGE8P0CG41 777 aa17.22■□□□□ 0.35
SMARCA2-203ENST00000349721 MTIF2P46199 727 aaKnown RBP17.22■□□□□ 0.35
SMARCA2-203ENST00000349721 CTAGE6Q86UF2 777 aa17.22■□□□□ 0.35
SMARCA2-203ENST00000349721 CTAGE4Q8IX94 777 aa17.22■□□□□ 0.35
SMARCA2-203ENST00000349721 SSFA2P28290 1259 aa17.22■□□□□ 0.35
SMARCA2-203ENST00000349721 NLRP6P59044 892 aa17.22■□□□□ 0.35
SMARCA2-203ENST00000349721 MXRA7P84157 204 aa17.22■□□□□ 0.35
SMARCA2-203ENST00000349721 FERMT1Q9BQL6 677 aa17.22■□□□□ 0.35
SMARCA2-203ENST00000349721 HYPKQ9NX55 129 aa17.22■□□□□ 0.35
SMARCA2-203ENST00000349721 KIAA0753Q2KHM9 967 aa17.21■□□□□ 0.35
SMARCA2-203ENST00000349721 CKAP2LQ8IYA6 745 aa17.21■□□□□ 0.35
SMARCA2-203ENST00000349721 RSRC1Q96IZ7 334 aaKnown RBP17.21■□□□□ 0.35
SMARCA2-203ENST00000349721 MPHOSPH8Q99549 860 aa17.21■□□□□ 0.35
SMARCA2-203ENST00000349721 CEP126Q9P2H0 1117 aa17.21■□□□□ 0.35
SMARCA2-203ENST00000349721 KANK3Q6NY19 840 aa17.21■□□□□ 0.35
SMARCA2-203ENST00000349721 FSIP1Q8NA03 581 aa17.21■□□□□ 0.35
SMARCA2-203ENST00000349721 KIF5BP33176 963 aa17.21■□□□□ 0.35
SMARCA2-203ENST00000349721 AIDAQ96BJ3 306 aa17.21■□□□□ 0.35
SMARCA2-203ENST00000349721 CPSF2Q9P2I0 782 aaKnown RBP17.21■□□□□ 0.34
SMARCA2-203ENST00000349721 GLRX3O76003 335 aaKnown RBP17.2■□□□□ 0.34
SMARCA2-203ENST00000349721 SMC6Q96SB8 1091 aa17.2■□□□□ 0.34
SMARCA2-203ENST00000349721 LIMCH1Q9UPQ0 1083 aa17.2■□□□□ 0.34
SMARCA2-203ENST00000349721 EBAG9O00559 213 aa17.2■□□□□ 0.34
SMARCA2-203ENST00000349721 AMPD3Q01432 767 aa17.2■□□□□ 0.34
SMARCA2-203ENST00000349721 PRPF4BQ13523 1007 aaKnown RBP17.2■□□□□ 0.34
SMARCA2-203ENST00000349721 PRPF40BQ6NWY9 871 aaKnown RBP17.2■□□□□ 0.34
SMARCA2-203ENST00000349721 ZFP91Q96JP5 570 aaPredicted RBP17.2■□□□□ 0.34
SMARCA2-203ENST00000349721 TATP17735 454 aaPredicted RBP17.19■□□□□ 0.34
SMARCA2-203ENST00000349721 LIG1P18858 919 aa17.19■□□□□ 0.34
SMARCA2-203ENST00000349721 USP5P45974 858 aa17.19■□□□□ 0.34
SMARCA2-203ENST00000349721 PLVAPQ9BX97 442 aa17.19■□□□□ 0.34
SMARCA2-203ENST00000349721 COMMD10Q9Y6G5 202 aa17.19■□□□□ 0.34
SMARCA2-203ENST00000349721 RASAL2Q9UJF2 1139 aa17.19■□□□□ 0.34
SMARCA2-203ENST00000349721 MX1P20591 662 aa17.19■□□□□ 0.34
SMARCA2-203ENST00000349721 PTPRGP23470 1445 aa17.19■□□□□ 0.34
SMARCA2-203ENST00000349721 ATRIPQ8WXE1 791 aa17.19■□□□□ 0.34
SMARCA2-203ENST00000349721 ANAPC4Q9UJX5 808 aa17.19■□□□□ 0.34
SMARCA2-203ENST00000349721 FYCO1Q9BQS8 1478 aa17.19■□□□□ 0.34
SMARCA2-203ENST00000349721 KLHL40Q2TBA0 621 aa17.19■□□□□ 0.34
SMARCA2-203ENST00000349721 OTUD6BQ8N6M0 293 aa17.19■□□□□ 0.34
SMARCA2-203ENST00000349721 CCDC77Q9BR77 488 aa17.19■□□□□ 0.34
SMARCA2-203ENST00000349721 NOP2P46087 812 aaKnown RBP17.19■□□□□ 0.34
SMARCA2-203ENST00000349721 RBM5P52756 815 aaKnown RBP eCLIP17.19■□□□□ 0.34
SMARCA2-203ENST00000349721 KIF1BPQ96EK5 621 aa17.19■□□□□ 0.34
SMARCA2-203ENST00000349721 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.19■□□□□ 0.341e-6■■■■□ 21.7
SMARCA2-203ENST00000349721 CUX1P39880 1505 aa17.18■□□□□ 0.34
SMARCA2-203ENST00000349721 ZNF165P49910 485 aa17.18■□□□□ 0.34
SMARCA2-203ENST00000349721 CEP57Q86XR8 500 aa17.18■□□□□ 0.34
SMARCA2-203ENST00000349721 CCDC94Q9BW85 323 aaPredicted RBP17.18■□□□□ 0.34
SMARCA2-203ENST00000349721 SETSIPP0DME0 302 aa17.18■□□□□ 0.34
SMARCA2-203ENST00000349721 CAPN2P17655 700 aa17.18■□□□□ 0.34
SMARCA2-203ENST00000349721 IQCGQ9H095 443 aaKnown RBP17.18■□□□□ 0.34
SMARCA2-203ENST00000349721 ACTN2P35609 894 aa17.18■□□□□ 0.34
SMARCA2-203ENST00000349721 FERMT2Q96AC1 680 aa17.18■□□□□ 0.34
SMARCA2-203ENST00000349721 UBE2HP62256 183 aa17.18■□□□□ 0.34
SMARCA2-203ENST00000349721 CCDC172P0C7W6 258 aa17.17■□□□□ 0.34
SMARCA2-203ENST00000349721 NOLC1Q14978 699 aaKnown RBP eCLIP17.17■□□□□ 0.34
SMARCA2-203ENST00000349721 GBP6Q6ZN66 633 aa17.17■□□□□ 0.34
SMARCA2-203ENST00000349721 CCDC129Q6ZRS4 1044 aa17.17■□□□□ 0.34
SMARCA2-203ENST00000349721 NBPF11Q86T75 865 aa17.17■□□□□ 0.34
SMARCA2-203ENST00000349721 UBA5Q9GZZ9 404 aa17.17■□□□□ 0.34
SMARCA2-203ENST00000349721 PUS7Q96PZ0 661 aaKnown RBP17.17■□□□□ 0.34
SMARCA2-203ENST00000349721 IL1RAPL2Q9NP60 686 aa17.17■□□□□ 0.34
SMARCA2-203ENST00000349721 SERPINA10Q9UK55 444 aa17.17■□□□□ 0.34
SMARCA2-203ENST00000349721 CCDC40Q4G0X9 1142 aa17.17■□□□□ 0.34
SMARCA2-203ENST00000349721 PPP1R1BQ9UD71 204 aaPredicted RBP17.17■□□□□ 0.34
SMARCA2-203ENST00000349721 LRP2BPQ9P2M1 347 aa17.17■□□□□ 0.34
SMARCA2-203ENST00000349721 SSRP1Q08945 709 aaKnown RBP17.16■□□□□ 0.34
SMARCA2-203ENST00000349721 LRSAM1Q6UWE0 723 aa17.16■□□□□ 0.34
SMARCA2-203ENST00000349721 SELENOOQ9BVL4 669 aa17.16■□□□□ 0.34
SMARCA2-203ENST00000349721 ANKRD30BQ9BXX2 1392 aa17.16■□□□□ 0.34
SMARCA2-203ENST00000349721 PABPN1LA6NDY0 278 aaKnown RBP17.16■□□□□ 0.34
SMARCA2-203ENST00000349721 ZFYP08048 801 aaPredicted RBP17.16■□□□□ 0.34
SMARCA2-203ENST00000349721 ZWINTO95229 277 aa17.16■□□□□ 0.34
SMARCA2-203ENST00000349721 PIBF1Q8WXW3 757 aa17.16■□□□□ 0.34
SMARCA2-203ENST00000349721 CTAGE1Q96RT6 745 aa17.16■□□□□ 0.34
SMARCA2-203ENST00000349721 TBC1D2Q9BYX2 928 aa17.16■□□□□ 0.34
SMARCA2-203ENST00000349721 CYLC1P35663 651 aaPredicted RBP17.16■□□□□ 0.34
SMARCA2-203ENST00000349721 RASSF4Q9H2L5 321 aa17.15■□□□□ 0.34
SMARCA2-203ENST00000349721 PIP4K2BP78356 416 aa17.15■□□□□ 0.34
SMARCA2-203ENST00000349721 RAB3IL1Q8TBN0 382 aa17.15■□□□□ 0.34
SMARCA2-203ENST00000349721 GOLGA1Q92805 767 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms