RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 PDIA4P13667 645 aaKnown RBP18.26■□□□□ 0.51
LMNA-201ENST00000347559 HSPA4P34932 840 aa18.25■□□□□ 0.51
LMNA-201ENST00000347559 TNMDQ9H2S6 317 aa18.25■□□□□ 0.51
LMNA-201ENST00000347559 TRMT1Q9NXH9 659 aaKnown RBP18.25■□□□□ 0.51
LMNA-201ENST00000347559 IFT172Q9UG01 1749 aa18.25■□□□□ 0.51
LMNA-201ENST00000347559 GOLGA6L4A6NEF3 574 aa18.25■□□□□ 0.51
LMNA-201ENST00000347559 FBXO38Q6PIJ6 1188 aa18.25■□□□□ 0.51
LMNA-201ENST00000347559 MCM10Q7L590 875 aa18.25■□□□□ 0.51
LMNA-201ENST00000347559 RIMS2Q9UQ26 1411 aa18.25■□□□□ 0.51
LMNA-201ENST00000347559 USP27XA6NNY8 438 aa18.25■□□□□ 0.51
LMNA-201ENST00000347559 VGFO15240 615 aaPredicted RBP18.25■□□□□ 0.51
LMNA-201ENST00000347559 ZNF75DP51815 510 aa18.25■□□□□ 0.51
LMNA-201ENST00000347559 RASEFQ8IZ41 740 aa18.25■□□□□ 0.51
LMNA-201ENST00000347559 MIS18AQ9NYP9 233 aa18.25■□□□□ 0.51
LMNA-201ENST00000347559 SNX14Q9Y5W7 946 aa18.25■□□□□ 0.51
LMNA-201ENST00000347559 ARID5BQ14865 1188 aa18.24■□□□□ 0.51
LMNA-201ENST00000347559 NUTM1Q86Y26 1132 aa18.24■□□□□ 0.51
LMNA-201ENST00000347559 CALCOCO1Q9P1Z2 691 aa18.24■□□□□ 0.51
LMNA-201ENST00000347559 CCDC144BQ3MJ40 725 aa18.24■□□□□ 0.51
LMNA-201ENST00000347559 G2E3Q7L622 706 aa18.24■□□□□ 0.51
LMNA-201ENST00000347559 CCDC144CPQ8IYA2 1237 aa18.24■□□□□ 0.51
LMNA-201ENST00000347559 MTMR6Q9Y217 621 aa18.24■□□□□ 0.51
LMNA-201ENST00000347559 DEPDC5O75140 1603 aa18.24■□□□□ 0.51
LMNA-201ENST00000347559 YEATS2Q9ULM3 1422 aa18.23■□□□□ 0.51
LMNA-201ENST00000347559 CASTP20810 708 aaKnown RBP18.23■□□□□ 0.51
LMNA-201ENST00000347559 DACT1Q9NYF0 836 aa18.23■□□□□ 0.51
LMNA-201ENST00000347559 PNMA6EA0A0J9YXQ4 647 aa18.23■□□□□ 0.51
LMNA-201ENST00000347559 GNAI2P04899 355 aa18.23■□□□□ 0.51
LMNA-201ENST00000347559 TTC6Q86TZ1 520 aa18.23■□□□□ 0.51
LMNA-201ENST00000347559 NEURL4Q96JN8 1562 aa18.23■□□□□ 0.51
LMNA-201ENST00000347559 IL13P35225 146 aa18.23■□□□□ 0.51
LMNA-201ENST00000347559 PTPN14Q15678 1187 aa18.23■□□□□ 0.51
LMNA-201ENST00000347559 GTF3C6Q969F1 213 aa18.23■□□□□ 0.51
LMNA-201ENST00000347559 DNAJC2Q99543 621 aaKnown RBP18.23■□□□□ 0.51
LMNA-201ENST00000347559 RBM6P78332 1123 aaKnown RBP18.22■□□□□ 0.51
LMNA-201ENST00000347559 RRS1Q15050 365 aaKnown RBP18.22■□□□□ 0.51
LMNA-201ENST00000347559 TRIM34Q9BYJ4 488 aa18.22■□□□□ 0.51
LMNA-201ENST00000347559 SPG7Q9UQ90 795 aa18.22■□□□□ 0.51
LMNA-201ENST00000347559 GLI2P10070 1586 aa18.22■□□□□ 0.51
LMNA-201ENST00000347559 CAPN2P17655 700 aa18.22■□□□□ 0.51
LMNA-201ENST00000347559 CDK19Q9BWU1 502 aa18.22■□□□□ 0.51
LMNA-201ENST00000347559 DNAJC25Q9H1X3 360 aa18.22■□□□□ 0.51
LMNA-201ENST00000347559 TFIP11Q9UBB9 837 aaKnown RBP18.22■□□□□ 0.51
LMNA-201ENST00000347559 ZRANB1Q9UGI0 708 aa18.22■□□□□ 0.51
LMNA-201ENST00000347559 NECAB1Q8N987 351 aa18.21■□□□□ 0.51
LMNA-201ENST00000347559 VWDEQ8N2E2 1590 aa18.21■□□□□ 0.51
LMNA-201ENST00000347559 ADGRB3O60242 1522 aa18.21■□□□□ 0.51
LMNA-201ENST00000347559 ATP7AQ04656 1500 aa18.21■□□□□ 0.51
LMNA-201ENST00000347559 ZNF165P49910 485 aa18.21■□□□□ 0.5
LMNA-201ENST00000347559 NOL10Q9BSC4 688 aaKnown RBP18.21■□□□□ 0.5
LMNA-201ENST00000347559 PTPRCP08575 1304 aa18.2■□□□□ 0.5
LMNA-201ENST00000347559 RAD50Q92878 1312 aa18.2■□□□□ 0.5
LMNA-201ENST00000347559 TTC14Q96N46 770 aa18.2■□□□□ 0.5
LMNA-201ENST00000347559 EFCAB6Q5THR3 1501 aa18.2■□□□□ 0.5
LMNA-201ENST00000347559 SALL3Q9BXA9 1300 aa18.2■□□□□ 0.5
LMNA-201ENST00000347559 HAP1P54257 671 aaPredicted RBP18.2■□□□□ 0.5
LMNA-201ENST00000347559 KRT85P78386 507 aa18.2■□□□□ 0.5
LMNA-201ENST00000347559 CWC27Q6UX04 472 aaKnown RBP18.2■□□□□ 0.5
LMNA-201ENST00000347559 FILIP1Q7Z7B0 1213 aa18.2■□□□□ 0.5
LMNA-201ENST00000347559 ZFYVE9O95405 1425 aa18.19■□□□□ 0.5
LMNA-201ENST00000347559 RPGRIP1LQ68CZ1 1315 aa18.19■□□□□ 0.5
LMNA-201ENST00000347559 PLA2G4DQ86XP0 818 aa18.19■□□□□ 0.5
LMNA-201ENST00000347559 SSH2Q76I76 1423 aa18.19■□□□□ 0.5
LMNA-201ENST00000347559 LARP1BQ659C4 914 aaKnown RBP18.18■□□□□ 0.5
LMNA-201ENST00000347559 CERS3Q8IU89 383 aa18.18■□□□□ 0.5
LMNA-201ENST00000347559 NECTIN2Q92692 538 aa18.18■□□□□ 0.5
LMNA-201ENST00000347559 SYTL4Q96C24 671 aaPredicted RBP18.18■□□□□ 0.5
LMNA-201ENST00000347559 AEBP1Q8IUX7 1158 aa18.18■□□□□ 0.5
LMNA-201ENST00000347559 CAMSAP1Q5T5Y3 1602 aa18.18■□□□□ 0.5
LMNA-201ENST00000347559 SKILP12757 684 aa18.18■□□□□ 0.5
LMNA-201ENST00000347559 HNRNPH2P55795 449 aaKnown RBP18.18■□□□□ 0.5
LMNA-201ENST00000347559 NME9Q86XW9 330 aa18.17■□□□□ 0.5
LMNA-201ENST00000347559 JAKMIP1Q96N16 626 aaKnown RBP18.17■□□□□ 0.5
LMNA-201ENST00000347559 BICD2Q8TD16 824 aa18.17■□□□□ 0.5
LMNA-201ENST00000347559 CD163L1Q9NR16 1453 aa18.17■□□□□ 0.5
LMNA-201ENST00000347559 GOLGA6L19H0YKK7 550 aa18.16■□□□□ 0.5
LMNA-201ENST00000347559 LRRC8AQ8IWT6 810 aa18.16■□□□□ 0.5
LMNA-201ENST00000347559 PDRG1Q9NUG6 133 aa18.16■□□□□ 0.5
LMNA-201ENST00000347559 FANCAO15360 1455 aa18.16■□□□□ 0.5
LMNA-201ENST00000347559 CCT4P50991 539 aaKnown RBP18.16■□□□□ 0.5
LMNA-201ENST00000347559 CDC37L1Q7L3B6 337 aa18.16■□□□□ 0.5
LMNA-201ENST00000347559 ERO1AQ96HE7 468 aa18.16■□□□□ 0.5
LMNA-201ENST00000347559 ZNF446Q9NWS9 450 aa18.16■□□□□ 0.5
LMNA-201ENST00000347559 KIAA0232Q92628 1395 aa18.16■□□□□ 0.5
LMNA-201ENST00000347559 USP16Q9Y5T5 823 aa18.16■□□□□ 0.5
LMNA-201ENST00000347559 SGSM2O43147 1006 aa18.15■□□□□ 0.5
LMNA-201ENST00000347559 ERCC6LQ2NKX8 1250 aa18.15■□□□□ 0.5
LMNA-201ENST00000347559 SPATA32Q96LK8 384 aa18.15■□□□□ 0.5
LMNA-201ENST00000347559 HYPKQ9NX55 129 aa18.15■□□□□ 0.5
LMNA-201ENST00000347559 NPATQ14207 1427 aa18.15■□□□□ 0.5
LMNA-201ENST00000347559 CCDC171Q6TFL3 1326 aa18.15■□□□□ 0.5
LMNA-201ENST00000347559 POLR3GO15318 223 aaPredicted RBP18.15■□□□□ 0.5
LMNA-201ENST00000347559 SLU7O95391 586 aaKnown RBP18.15■□□□□ 0.5
LMNA-201ENST00000347559 SULT6B1Q6IMI4 303 aa18.15■□□□□ 0.5
LMNA-201ENST00000347559 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.15■□□□□ 0.5
LMNA-201ENST00000347559 ADCK5Q3MIX3 580 aa18.14■□□□□ 0.5
LMNA-201ENST00000347559 LRRFIP2Q9Y608 721 aaKnown RBP18.14■□□□□ 0.5
LMNA-201ENST00000347559 MROH1Q8NDA8 1641 aa18.14■□□□□ 0.49
LMNA-201ENST00000347559 ABCC3O15438 1527 aa18.14■□□□□ 0.49
LMNA-201ENST00000347559 CHL1O00533 1208 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms