RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 WDR90Q96KV7 1748 aa24.51■■□□□ 1.51
CDHR4-201ENST00000343366 ARFGEF1Q9Y6D6 1849 aa24.5■■□□□ 1.51
CDHR4-201ENST00000343366 APLP1P51693 650 aa24.5■■□□□ 1.51
CDHR4-201ENST00000343366 SLC52A2Q9HAB3 445 aa24.5■■□□□ 1.51
CDHR4-201ENST00000343366 NEUROD2Q15784 382 aa24.49■■□□□ 1.51
CDHR4-201ENST00000343366 IL17REQ8NFR9 667 aa24.49■■□□□ 1.51
CDHR4-201ENST00000343366 LGR6Q9HBX8 967 aa24.49■■□□□ 1.51
CDHR4-201ENST00000343366 C4AP0C0L4 1744 aa24.48■■□□□ 1.51
CDHR4-201ENST00000343366 ASAP1Q9ULH1 1129 aa24.48■■□□□ 1.51
CDHR4-201ENST00000343366 TOMM70O94826 608 aa24.47■■□□□ 1.51
CDHR4-201ENST00000343366 MMP10P09238 476 aa24.47■■□□□ 1.51
CDHR4-201ENST00000343366 GNPATO15228 680 aa24.46■■□□□ 1.51
CDHR4-201ENST00000343366 TGFB2P61812 414 aa24.46■■□□□ 1.51
CDHR4-201ENST00000343366 NFATC2IPQ8NCF5 419 aa24.46■■□□□ 1.51
CDHR4-201ENST00000343366 BABAM1Q9NWV8 329 aa24.46■■□□□ 1.51
CDHR4-201ENST00000343366 RRP7AQ9Y3A4 280 aaKnown RBP24.46■■□□□ 1.51
CDHR4-201ENST00000343366 SIPA1L3O60292 1781 aaPredicted RBP24.46■■□□□ 1.51
CDHR4-201ENST00000343366 MYH14Q7Z406 1995 aaKnown RBP24.45■■□□□ 1.51
CDHR4-201ENST00000343366 MCM10Q7L590 875 aa24.45■■□□□ 1.5
CDHR4-201ENST00000343366 TAF7Q15545 349 aaPredicted RBP24.44■■□□□ 1.5
CDHR4-201ENST00000343366 ATG3Q9NT62 314 aa24.44■■□□□ 1.5
CDHR4-201ENST00000343366 TRIM35Q9UPQ4 493 aa24.44■■□□□ 1.5
CDHR4-201ENST00000343366 SLC4A9Q96Q91 983 aa24.43■■□□□ 1.5
CDHR4-201ENST00000343366 ATP6V1AP38606 617 aa24.41■■□□□ 1.5
CDHR4-201ENST00000343366 NMRK2Q9NPI5 230 aa24.41■■□□□ 1.5
CDHR4-201ENST00000343366 DCTN1Q14203 1278 aa24.4■■□□□ 1.5
CDHR4-201ENST00000343366 WDR63Q8IWG1 891 aa24.4■■□□□ 1.5
CDHR4-201ENST00000343366 WWC1Q8IX03 1113 aa24.4■■□□□ 1.5
CDHR4-201ENST00000343366 SBF1O95248 1867 aa24.39■■□□□ 1.5
CDHR4-201ENST00000343366 A0A0G2JLW4 131 aa24.39■■□□□ 1.49
CDHR4-201ENST00000343366 BTBD11A6QL63 1104 aa24.39■■□□□ 1.49
CDHR4-201ENST00000343366 KCNA3P22001 575 aa24.39■■□□□ 1.49
CDHR4-201ENST00000343366 TTC5Q8N0Z6 440 aa24.39■■□□□ 1.49
CDHR4-201ENST00000343366 IL16Q14005 1332 aa24.38■■□□□ 1.49
CDHR4-201ENST00000343366 NLGN1Q8N2Q7 840 aa24.38■■□□□ 1.49
CDHR4-201ENST00000343366 BCS1LQ9Y276 419 aa24.38■■□□□ 1.49
CDHR4-201ENST00000343366 RBM46Q8TBY0 533 aaKnown RBP24.37■■□□□ 1.49
CDHR4-201ENST00000343366 GYS1P13807 737 aa24.36■■□□□ 1.49
CDHR4-201ENST00000343366 DPEP1P16444 411 aa24.36■■□□□ 1.49
CDHR4-201ENST00000343366 ADRA2BP18089 450 aa24.36■■□□□ 1.49
CDHR4-201ENST00000343366 GNAI1P63096 354 aa24.36■■□□□ 1.49
CDHR4-201ENST00000343366 RC3H1Q5TC82 1133 aaKnown RBP24.36■■□□□ 1.49
CDHR4-201ENST00000343366 JMYQ8N9B5 988 aa24.36■■□□□ 1.49
CDHR4-201ENST00000343366 CFAP44Q96MT7 982 aa24.36■■□□□ 1.49
CDHR4-201ENST00000343366 CNTNAP4Q9C0A0 1308 aa24.35■■□□□ 1.49
CDHR4-201ENST00000343366 ZNF790Q6PG37 636 aa24.35■■□□□ 1.49
CDHR4-201ENST00000343366 ARHGEF1Q92888 912 aaKnown RBP24.35■■□□□ 1.49
CDHR4-201ENST00000343366 IFT57Q9NWB7 429 aa24.35■■□□□ 1.49
CDHR4-201ENST00000343366 RTCBQ9Y3I0 505 aaKnown RBP24.35■■□□□ 1.49
CDHR4-201ENST00000343366 TNRC6CQ9HCJ0 1690 aaKnown RBP24.34■■□□□ 1.49
CDHR4-201ENST00000343366 TRAPPC3LQ5T215 181 aa24.34■■□□□ 1.49
CDHR4-201ENST00000343366 VSIG10Q8N0Z9 540 aa24.33■■□□□ 1.49
CDHR4-201ENST00000343366 THUMPD2Q9BTF0 503 aaKnown RBP24.33■■□□□ 1.49
CDHR4-201ENST00000343366 KDM3BQ7LBC6 1761 aa24.33■■□□□ 1.49
CDHR4-201ENST00000343366 UBR2Q8IWV8 1755 aa24.33■■□□□ 1.49
CDHR4-201ENST00000343366 CHL1O00533 1208 aa24.32■■□□□ 1.48
CDHR4-201ENST00000343366 ARHGAP27Q6ZUM4 889 aa24.32■■□□□ 1.48
CDHR4-201ENST00000343366 TSPYL4Q9UJ04 414 aa24.32■■□□□ 1.48
CDHR4-201ENST00000343366 TJP1Q07157 1748 aa24.31■■□□□ 1.48
CDHR4-201ENST00000343366 KLRG1Q96E93 195 aa24.31■■□□□ 1.48
CDHR4-201ENST00000343366 FMNL2Q96PY5 1086 aa24.31■■□□□ 1.48
CDHR4-201ENST00000343366 CCDC87Q9NVE4 849 aa24.31■■□□□ 1.48
CDHR4-201ENST00000343366 SALL2Q9Y467 1007 aaPredicted RBP24.31■■□□□ 1.48
CDHR4-201ENST00000343366 KCPQ6ZWJ8 1503 aa24.3■■□□□ 1.48
CDHR4-201ENST00000343366 RPS6KA4O75676 772 aa24.3■■□□□ 1.48
CDHR4-201ENST00000343366 ZNF853P0CG23 659 aa24.3■■□□□ 1.48
CDHR4-201ENST00000343366 HNRNPUQ00839 825 aaKnown RBP eCLIP24.3■■□□□ 1.48
CDHR4-201ENST00000343366 C9orf131Q5VYM1 1079 aa24.3■■□□□ 1.48
CDHR4-201ENST00000343366 TEX13AQ9BXU3 409 aaPredicted RBP24.3■■□□□ 1.48
CDHR4-201ENST00000343366 ZNF521Q96K83 1311 aa24.3■■□□□ 1.48
CDHR4-201ENST00000343366 HTRA3P83110 453 aa24.29■■□□□ 1.48
CDHR4-201ENST00000343366 FSTL1Q12841 308 aa24.29■■□□□ 1.48
CDHR4-201ENST00000343366 SLC39A6Q13433 755 aa24.28■■□□□ 1.48
CDHR4-201ENST00000343366 COL13A1Q5TAT6 717 aaPredicted RBP24.28■■□□□ 1.48
CDHR4-201ENST00000343366 GOLGA2Q08379 1002 aa24.27■■□□□ 1.48
CDHR4-201ENST00000343366 RBM42Q9BTD8 480 aaKnown RBP24.27■■□□□ 1.48
CDHR4-201ENST00000343366 CHMP4AQ9BY43 222 aa24.27■■□□□ 1.48
CDHR4-201ENST00000343366 MYH16Q9H6N6 1097 aa24.27■■□□□ 1.48
CDHR4-201ENST00000343366 LAS1LQ9Y4W2 734 aaKnown RBP24.27■■□□□ 1.48
CDHR4-201ENST00000343366 PTCD1O75127 700 aaKnown RBP24.26■■□□□ 1.47
CDHR4-201ENST00000343366 PARP3Q9Y6F1 533 aa24.25■■□□□ 1.47
CDHR4-201ENST00000343366 ZBED9Q6R2W3 1325 aa24.25■■□□□ 1.47
CDHR4-201ENST00000343366 HEG1Q9ULI3 1381 aa24.25■■□□□ 1.47
CDHR4-201ENST00000343366 DLEC1Q9Y238 1755 aa24.24■■□□□ 1.47
CDHR4-201ENST00000343366 E9PSI1 815 aa24.24■■□□□ 1.47
CDHR4-201ENST00000343366 RFC4P35249 363 aa24.24■■□□□ 1.47
CDHR4-201ENST00000343366 EIF4A1P60842 406 aaKnown RBP24.24■■□□□ 1.47
CDHR4-201ENST00000343366 DDR1Q08345 913 aa24.24■■□□□ 1.47
CDHR4-201ENST00000343366 MIS18AQ9NYP9 233 aa24.24■■□□□ 1.47
CDHR4-201ENST00000343366 SOS1Q07889 1333 aaPredicted RBP24.24■■□□□ 1.47
CDHR4-201ENST00000343366 NRXN2Q9P2S2 1712 aa24.24■■□□□ 1.47
CDHR4-201ENST00000343366 SNRPA1P09661 255 aaKnown RBP24.23■■□□□ 1.47
CDHR4-201ENST00000343366 ZNF496Q96IT1 587 aaPredicted RBP24.23■■□□□ 1.47
CDHR4-201ENST00000343366 MBIPQ9NS73 344 aa24.23■■□□□ 1.47
CDHR4-201ENST00000343366 PIM2Q9P1W9 311 aa24.23■■□□□ 1.47
CDHR4-201ENST00000343366 AFDNP55196 1824 aaKnown RBP24.22■■□□□ 1.47
CDHR4-201ENST00000343366 USP42Q9H9J4 1324 aaKnown RBP24.22■■□□□ 1.47
CDHR4-201ENST00000343366 HOXB7P09629 217 aa24.22■■□□□ 1.47
CDHR4-201ENST00000343366 STARD3NLO95772 234 aa24.21■■□□□ 1.47
CDHR4-201ENST00000343366 KDM2BQ8NHM5 1336 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms