RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 MS4A1P11836 297 aa20.89■□□□□ 0.93
SNED1-202ENST00000342631 SLC4A9Q96Q91 983 aa20.89■□□□□ 0.93
SNED1-202ENST00000342631 DDX21Q9NR30 783 aaKnown RBP eCLIP20.89■□□□□ 0.93
SNED1-202ENST00000342631 HYPKQ9NX55 129 aa20.89■□□□□ 0.93
SNED1-202ENST00000342631 TJP1Q07157 1748 aa20.89■□□□□ 0.93
SNED1-202ENST00000342631 PTPRCP08575 1304 aa20.89■□□□□ 0.93
SNED1-202ENST00000342631 CANXP27824 592 aaKnown RBP20.88■□□□□ 0.93
SNED1-202ENST00000342631 ATP6V1AP38606 617 aa20.88■□□□□ 0.93
SNED1-202ENST00000342631 ZKSCAN2Q63HK3 967 aa20.88■□□□□ 0.93
SNED1-202ENST00000342631 NECTIN2Q92692 538 aa20.88■□□□□ 0.93
SNED1-202ENST00000342631 CHPF2Q9P2E5 772 aa20.88■□□□□ 0.93
SNED1-202ENST00000342631 DNAJC10Q8IXB1 793 aa20.88■□□□□ 0.93
SNED1-202ENST00000342631 TCERG1O14776 1098 aaKnown RBP20.87■□□□□ 0.93
SNED1-202ENST00000342631 FRAT1Q92837 279 aaPredicted RBP20.87■□□□□ 0.93
SNED1-202ENST00000342631 NOB1Q9ULX3 412 aaKnown RBP20.87■□□□□ 0.93
SNED1-202ENST00000342631 PDE3AQ14432 1141 aa20.86■□□□□ 0.93
SNED1-202ENST00000342631 NEFLP07196 543 aa20.86■□□□□ 0.93
SNED1-202ENST00000342631 ATF7IPQ6VMQ6 1270 aa20.86■□□□□ 0.93
SNED1-202ENST00000342631 PLSCR1O15162 318 aa20.85■□□□□ 0.93
SNED1-202ENST00000342631 CYP19A1P11511 503 aaPredicted RBP20.85■□□□□ 0.93
SNED1-202ENST00000342631 PDIA6Q15084 440 aa20.85■□□□□ 0.93
SNED1-202ENST00000342631 API5Q9BZZ5 524 aaKnown RBP20.85■□□□□ 0.93
SNED1-202ENST00000342631 COL5A3P25940 1745 aaPredicted RBP20.84■□□□□ 0.93
SNED1-202ENST00000342631 PLIN1O60240 522 aa20.84■□□□□ 0.93
SNED1-202ENST00000342631 FLIIQ13045 1269 aa20.84■□□□□ 0.93
SNED1-202ENST00000342631 SLC27A3Q5K4L6 730 aa20.84■□□□□ 0.93
SNED1-202ENST00000342631 RGPD3A6NKT7 1758 aaPredicted RBP20.83■□□□□ 0.93
SNED1-202ENST00000342631 RGPD4Q7Z3J3 1758 aa20.83■□□□□ 0.93
SNED1-202ENST00000342631 TNS1Q9HBL0 1735 aaKnown RBP20.83■□□□□ 0.93
SNED1-202ENST00000342631 CCNL1Q9UK58 526 aaPredicted RBP20.82■□□□□ 0.92
SNED1-202ENST00000342631 TRIM27P14373 513 aa20.82■□□□□ 0.92
SNED1-202ENST00000342631 ITPK1Q13572 414 aa20.82■□□□□ 0.92
SNED1-202ENST00000342631 RREB1Q92766 1687 aa20.82■□□□□ 0.92
SNED1-202ENST00000342631 A1BGP04217 495 aa20.81■□□□□ 0.92
SNED1-202ENST00000342631 G2E3Q7L622 706 aa20.81■□□□□ 0.92
SNED1-202ENST00000342631 APBA3O96018 575 aa20.8■□□□□ 0.92
SNED1-202ENST00000342631 PROSER3Q2NL68 480 aa20.8■□□□□ 0.92
SNED1-202ENST00000342631 LRP10Q7Z4F1 713 aa20.8■□□□□ 0.92
SNED1-202ENST00000342631 DZIP1LQ8IYY4 767 aaKnown RBP20.8■□□□□ 0.92
SNED1-202ENST00000342631 NBPF26B4DH59 902 aa20.8■□□□□ 0.92
SNED1-202ENST00000342631 DDX58O95786 925 aaKnown RBP20.8■□□□□ 0.92
SNED1-202ENST00000342631 FKBP5Q13451 457 aaPredicted RBP20.8■□□□□ 0.92
SNED1-202ENST00000342631 RC3H1Q5TC82 1133 aaKnown RBP20.8■□□□□ 0.92
SNED1-202ENST00000342631 NBPF14Q5TI25 921 aa20.8■□□□□ 0.92
SNED1-202ENST00000342631 NBPF10Q6P3W6 841 aaKnown RBP20.8■□□□□ 0.92
SNED1-202ENST00000342631 FTSJ3Q8IY81 847 aaKnown RBP20.8■□□□□ 0.92
SNED1-202ENST00000342631 NBPF15Q8N660 670 aa20.8■□□□□ 0.92
SNED1-202ENST00000342631 PHAXQ9H814 394 aaKnown RBP20.8■□□□□ 0.92
SNED1-202ENST00000342631 CCDC87Q9NVE4 849 aa20.8■□□□□ 0.92
SNED1-202ENST00000342631 EP400Q96L91 3159 aa20.8■□□□□ 0.92
SNED1-202ENST00000342631 CNTNAP4Q9C0A0 1308 aa20.8■□□□□ 0.92
SNED1-202ENST00000342631 TAF1LQ8IZX4 1826 aa20.8■□□□□ 0.92
SNED1-202ENST00000342631 MYL6BP14649 208 aa20.79■□□□□ 0.92
SNED1-202ENST00000342631 CRKLP46109 303 aaKnown RBP20.79■□□□□ 0.92
SNED1-202ENST00000342631 IL6STP40189 918 aaPredicted RBP20.78■□□□□ 0.92
SNED1-202ENST00000342631 ANXA1P04083 346 aa20.78■□□□□ 0.92
SNED1-202ENST00000342631 ABCC4O15439 1325 aa20.77■□□□□ 0.92
SNED1-202ENST00000342631 CCDC125Q86Z20 511 aa20.77■□□□□ 0.92
SNED1-202ENST00000342631 LINC00116Q8NCU8 138 aa20.77■□□□□ 0.92
SNED1-202ENST00000342631 ERICH6BQ5W0A0 696 aa20.76■□□□□ 0.91
SNED1-202ENST00000342631 INTS5Q6P9B9 1019 aaKnown RBP20.76■□□□□ 0.91
SNED1-202ENST00000342631 COPS6Q7L5N1 327 aa20.76■□□□□ 0.91
SNED1-202ENST00000342631 NPM2Q86SE8 214 aaKnown RBP20.76■□□□□ 0.91
SNED1-202ENST00000342631 ZBTB1Q9Y2K1 713 aa20.76■□□□□ 0.91
SNED1-202ENST00000342631 SF3B2Q13435 895 aaKnown RBP20.76■□□□□ 0.91
SNED1-202ENST00000342631 TXNRD1Q16881 649 aa20.76■□□□□ 0.91
SNED1-202ENST00000342631 XAGE3Q8WTP9 111 aa20.76■□□□□ 0.91
SNED1-202ENST00000342631 MYH14Q7Z406 1995 aaKnown RBP20.76■□□□□ 0.91
SNED1-202ENST00000342631 PXDNLA1KZ92 1463 aa20.75■□□□□ 0.91
SNED1-202ENST00000342631 C20orf194Q5TEA3 1177 aa20.75■□□□□ 0.91
SNED1-202ENST00000342631 KSR2Q6VAB6 950 aa20.75■□□□□ 0.91
SNED1-202ENST00000342631 CLUAP1Q96AJ1 413 aa20.74■□□□□ 0.91
SNED1-202ENST00000342631 PIP4K2AP48426 406 aaPredicted RBP20.74■□□□□ 0.91
SNED1-202ENST00000342631 EIF5P55010 431 aaKnown RBP20.74■□□□□ 0.91
SNED1-202ENST00000342631 ANKRD13DQ6ZTN6 518 aa20.74■□□□□ 0.91
SNED1-202ENST00000342631 PANK1Q8TE04 598 aa20.74■□□□□ 0.91
SNED1-202ENST00000342631 LRRC4BQ9NT99 713 aa20.74■□□□□ 0.91
SNED1-202ENST00000342631 C4BP0C0L5 1744 aa20.74■□□□□ 0.91
SNED1-202ENST00000342631 PI4KAP2A4QPH2 592 aa20.73■□□□□ 0.91
SNED1-202ENST00000342631 AIMP1Q12904 312 aaKnown RBP20.73■□□□□ 0.91
SNED1-202ENST00000342631 INTS3Q68E01 1043 aaKnown RBP20.73■□□□□ 0.91
SNED1-202ENST00000342631 PI4KAP1Q8N8J0 262 aa20.73■□□□□ 0.91
SNED1-202ENST00000342631 PLBD2Q8NHP8 589 aa20.73■□□□□ 0.91
SNED1-202ENST00000342631 RLBP1P12271 317 aa20.72■□□□□ 0.91
SNED1-202ENST00000342631 CCT4P50991 539 aaKnown RBP20.72■□□□□ 0.91
SNED1-202ENST00000342631 PROM2Q8N271 834 aa20.72■□□□□ 0.91
SNED1-202ENST00000342631 DNAAF4Q8WXU2 420 aa20.72■□□□□ 0.91
SNED1-202ENST00000342631 CHMP4BQ9H444 224 aaKnown RBP20.72■□□□□ 0.91
SNED1-202ENST00000342631 N4BP2Q86UW6 1770 aaPredicted RBP20.72■□□□□ 0.91
SNED1-202ENST00000342631 ADCY9O60503 1353 aa20.72■□□□□ 0.91
SNED1-202ENST00000342631 A0A087WZG4 1122 aa20.72■□□□□ 0.91
SNED1-202ENST00000342631 BAG6P46379 1132 aa20.72■□□□□ 0.91
SNED1-202ENST00000342631 KCNQ4P56696 695 aa20.72■□□□□ 0.91
SNED1-202ENST00000342631 AAMPQ13685 434 aa20.72■□□□□ 0.91
SNED1-202ENST00000342631 MVPQ14764 893 aaKnown RBP20.72■□□□□ 0.91
SNED1-202ENST00000342631 TNNQ9UQP3 1299 aa20.72■□□□□ 0.91
SNED1-202ENST00000342631 RPS6KA4O75676 772 aa20.71■□□□□ 0.91
SNED1-202ENST00000342631 KIF6Q6ZMV9 814 aa20.71■□□□□ 0.91
SNED1-202ENST00000342631 RIC3Q7Z5B4 369 aa20.71■□□□□ 0.91
SNED1-202ENST00000342631 DDX19BQ9UMR2 479 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms