RNA–Protein interactions for RNA: ENST00000341408.5

VCX-201, Transcript of variable charge X-linked, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX, Length 677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX-201ENST00000341408 IFT57Q9NWB7 429 aa20.34■□□□□ 0.85
VCX-201ENST00000341408 ZNF853P0CG23 659 aa20.33■□□□□ 0.85
VCX-201ENST00000341408 GOLGA2Q08379 1002 aa20.33■□□□□ 0.85
VCX-201ENST00000341408 TSR2Q969E8 191 aaKnown RBP20.33■□□□□ 0.85
VCX-201ENST00000341408 MBIPQ9NS73 344 aa20.33■□□□□ 0.85
VCX-201ENST00000341408 IL16Q14005 1332 aa20.32■□□□□ 0.84
VCX-201ENST00000341408 ZBED9Q6R2W3 1325 aa20.32■□□□□ 0.84
VCX-201ENST00000341408 PTCD1O75127 700 aaKnown RBP20.32■□□□□ 0.84
VCX-201ENST00000341408 ZNF790Q6PG37 636 aa20.32■□□□□ 0.84
VCX-201ENST00000341408 TTC5Q8N0Z6 440 aa20.32■□□□□ 0.84
VCX-201ENST00000341408 RBM42Q9BTD8 480 aaKnown RBP20.32■□□□□ 0.84
VCX-201ENST00000341408 HSPA6P17066 643 aa20.31■□□□□ 0.84
VCX-201ENST00000341408 SMARCC1Q92922 1105 aaPredicted RBP20.31■□□□□ 0.84
VCX-201ENST00000341408 PALLDQ8WX93 1383 aa20.31■□□□□ 0.84
VCX-201ENST00000341408 KDM3BQ7LBC6 1761 aa20.3■□□□□ 0.84
VCX-201ENST00000341408 SLFN5Q08AF3 891 aa20.29■□□□□ 0.84
VCX-201ENST00000341408 ZNF496Q96IT1 587 aaPredicted RBP20.29■□□□□ 0.84
VCX-201ENST00000341408 BABAM1Q9NWV8 329 aa20.29■□□□□ 0.84
VCX-201ENST00000341408 EIF4A1P60842 406 aaKnown RBP20.28■□□□□ 0.84
VCX-201ENST00000341408 KRT24Q2M2I5 525 aa20.28■□□□□ 0.84
VCX-201ENST00000341408 AK7Q96M32 723 aa20.28■□□□□ 0.84
VCX-201ENST00000341408 FANCIQ9NVI1 1328 aa20.27■□□□□ 0.84
VCX-201ENST00000341408 E9PSI1 815 aa20.27■□□□□ 0.84
VCX-201ENST00000341408 WWC3Q9ULE0 1092 aa20.27■□□□□ 0.84
VCX-201ENST00000341408 KCPQ6ZWJ8 1503 aa20.27■□□□□ 0.83
VCX-201ENST00000341408 C5P01031 1676 aa20.26■□□□□ 0.83
VCX-201ENST00000341408 LOC102724428A0A0B4J2F2 783 aa20.26■□□□□ 0.83
VCX-201ENST00000341408 SIK1P57059 783 aa20.26■□□□□ 0.83
VCX-201ENST00000341408 FMNL2Q96PY5 1086 aa20.26■□□□□ 0.83
VCX-201ENST00000341408 SLC4A9Q96Q91 983 aa20.26■□□□□ 0.83
VCX-201ENST00000341408 MYH16Q9H6N6 1097 aa20.26■□□□□ 0.83
VCX-201ENST00000341408 PRAMEF22A3QJZ6 481 aa20.25■□□□□ 0.83
VCX-201ENST00000341408 ELL2O00472 640 aaPredicted RBP20.25■□□□□ 0.83
VCX-201ENST00000341408 UBR2Q8IWV8 1755 aa20.24■□□□□ 0.83
VCX-201ENST00000341408 PHF14O94880 888 aa20.24■□□□□ 0.83
VCX-201ENST00000341408 ATP6V1AP38606 617 aa20.24■□□□□ 0.83
VCX-201ENST00000341408 EXOSC9Q06265 439 aaKnown RBP20.24■□□□□ 0.83
VCX-201ENST00000341408 ADCY9O60503 1353 aa20.23■□□□□ 0.83
VCX-201ENST00000341408 HEG1Q9ULI3 1381 aa20.23■□□□□ 0.83
VCX-201ENST00000341408 DNAJC10Q8IXB1 793 aa20.23■□□□□ 0.83
VCX-201ENST00000341408 TRMT2AQ8IZ69 625 aaKnown RBP20.23■□□□□ 0.83
VCX-201ENST00000341408 C8orf58Q8NAV2 365 aa20.23■□□□□ 0.83
VCX-201ENST00000341408 ITPK1Q13572 414 aa20.22■□□□□ 0.83
VCX-201ENST00000341408 DUSP27Q5VZP5 1158 aa20.22■□□□□ 0.83
VCX-201ENST00000341408 TSPYL6Q8N831 410 aa20.22■□□□□ 0.83
VCX-201ENST00000341408 TAF1LQ8IZX4 1826 aa20.21■□□□□ 0.83
VCX-201ENST00000341408 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.21■□□□□ 0.83
VCX-201ENST00000341408 SNRPA1P09661 255 aaKnown RBP20.2■□□□□ 0.82
VCX-201ENST00000341408 USP16Q9Y5T5 823 aa20.2■□□□□ 0.82
VCX-201ENST00000341408 SMIM5Q71RC9 77 aa20.19■□□□□ 0.82
VCX-201ENST00000341408 VSIG10Q8N0Z9 540 aa20.19■□□□□ 0.82
VCX-201ENST00000341408 NECTIN2Q92692 538 aa20.19■□□□□ 0.82
VCX-201ENST00000341408 C4BP0C0L5 1744 aa20.19■□□□□ 0.82
VCX-201ENST00000341408 EIF2S2P20042 333 aaKnown RBP20.18■□□□□ 0.82
VCX-201ENST00000341408 SSFA2P28290 1259 aa20.18■□□□□ 0.82
VCX-201ENST00000341408 LINC00116Q8NCU8 138 aa20.18■□□□□ 0.82
VCX-201ENST00000341408 TJP1Q07157 1748 aa20.18■□□□□ 0.82
VCX-201ENST00000341408 TWISTNBQ3B726 338 aaPredicted RBP20.17■□□□□ 0.82
VCX-201ENST00000341408 AMIGO3Q86WK7 504 aa20.17■□□□□ 0.82
VCX-201ENST00000341408 KIF3CO14782 793 aa20.16■□□□□ 0.82
VCX-201ENST00000341408 TCERG1O14776 1098 aaKnown RBP20.15■□□□□ 0.82
VCX-201ENST00000341408 A1BGP04217 495 aa20.15■□□□□ 0.82
VCX-201ENST00000341408 CYP19A1P11511 503 aaPredicted RBP20.15■□□□□ 0.82
VCX-201ENST00000341408 PIP4K2AP48426 406 aaPredicted RBP20.15■□□□□ 0.82
VCX-201ENST00000341408 APLP1P51693 650 aa20.15■□□□□ 0.82
VCX-201ENST00000341408 TEX13AQ9BXU3 409 aaPredicted RBP20.15■□□□□ 0.82
VCX-201ENST00000341408 GNPATO15228 680 aa20.14■□□□□ 0.81
VCX-201ENST00000341408 VAMP4O75379 141 aa20.14■□□□□ 0.81
VCX-201ENST00000341408 UBR3Q6ZT12 1888 aa20.13■□□□□ 0.81
VCX-201ENST00000341408 ZNF831Q5JPB2 1677 aa20.13■□□□□ 0.81
VCX-201ENST00000341408 STARD3NLO95772 234 aa20.13■□□□□ 0.81
VCX-201ENST00000341408 CRKLP46109 303 aaKnown RBP20.13■□□□□ 0.81
VCX-201ENST00000341408 HDGFL1Q5TGJ6 251 aa20.13■□□□□ 0.81
VCX-201ENST00000341408 COL5A3P25940 1745 aaPredicted RBP20.11■□□□□ 0.81
VCX-201ENST00000341408 TOMM70O94826 608 aa20.11■□□□□ 0.81
VCX-201ENST00000341408 MMP10P09238 476 aa20.11■□□□□ 0.81
VCX-201ENST00000341408 HOXB7P09629 217 aa20.11■□□□□ 0.81
VCX-201ENST00000341408 CANXP27824 592 aaKnown RBP20.11■□□□□ 0.81
VCX-201ENST00000341408 INTS5Q6P9B9 1019 aaKnown RBP20.11■□□□□ 0.81
VCX-201ENST00000341408 CCDC87Q9NVE4 849 aa20.11■□□□□ 0.81
VCX-201ENST00000341408 BCS1LQ9Y276 419 aa20.11■□□□□ 0.81
VCX-201ENST00000341408 LAMB4A4D0S4 1761 aa20.11■□□□□ 0.81
VCX-201ENST00000341408 ANXA1P04083 346 aa20.1■□□□□ 0.81
VCX-201ENST00000341408 ARHGAP27Q6ZUM4 889 aa20.1■□□□□ 0.81
VCX-201ENST00000341408 ZBTB1Q9Y2K1 713 aa20.1■□□□□ 0.81
VCX-201ENST00000341408 CICQ96RK0 1608 aaPredicted RBP20.09■□□□□ 0.81
VCX-201ENST00000341408 MYH14Q7Z406 1995 aaKnown RBP20.09■□□□□ 0.81
VCX-201ENST00000341408 NBPF26B4DH59 902 aa20.09■□□□□ 0.81
VCX-201ENST00000341408 MYL6BP14649 208 aa20.09■□□□□ 0.81
VCX-201ENST00000341408 TGFB2P61812 414 aa20.09■□□□□ 0.81
VCX-201ENST00000341408 PROSER3Q2NL68 480 aa20.09■□□□□ 0.81
VCX-201ENST00000341408 NBPF10Q6P3W6 841 aaKnown RBP20.09■□□□□ 0.81
VCX-201ENST00000341408 NBPF15Q8N660 670 aa20.09■□□□□ 0.81
VCX-201ENST00000341408 CHPF2Q9P2E5 772 aa20.09■□□□□ 0.81
VCX-201ENST00000341408 CNTNAP4Q9C0A0 1308 aa20.08■□□□□ 0.81
VCX-201ENST00000341408 TRAPPC3LQ5T215 181 aa20.08■□□□□ 0.81
VCX-201ENST00000341408 RC3H1Q5TC82 1133 aaKnown RBP20.08■□□□□ 0.81
VCX-201ENST00000341408 CCDC30Q5VVM6 783 aa20.08■□□□□ 0.81
VCX-201ENST00000341408 NLGN1Q8N2Q7 840 aa20.08■□□□□ 0.81
VCX-201ENST00000341408 ZNF330Q9Y3S2 320 aaPredicted RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms