RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 CFAP44Q96MT7 982 aa17.2■□□□□ 0.34
TUBD1-202ENST00000340993 SPINK5Q9NQ38 1064 aaPredicted RBP17.2■□□□□ 0.34
TUBD1-202ENST00000340993 ZNF831Q5JPB2 1677 aa17.19■□□□□ 0.34
TUBD1-202ENST00000340993 SNRPA1P09661 255 aaKnown RBP17.19■□□□□ 0.34
TUBD1-202ENST00000340993 COL23A1Q86Y22 540 aaPredicted RBP17.19■□□□□ 0.34
TUBD1-202ENST00000340993 NGEFQ8N5V2 710 aa17.19■□□□□ 0.34
TUBD1-202ENST00000340993 IFT57Q9NWB7 429 aa17.19■□□□□ 0.34
TUBD1-202ENST00000340993 ATF5Q9Y2D1 282 aaPredicted RBP17.19■□□□□ 0.34
TUBD1-202ENST00000340993 INTS5Q6P9B9 1019 aaKnown RBP17.18■□□□□ 0.34
TUBD1-202ENST00000340993 CCDC87Q9NVE4 849 aa17.18■□□□□ 0.34
TUBD1-202ENST00000340993 RTCBQ9Y3I0 505 aaKnown RBP17.18■□□□□ 0.34
TUBD1-202ENST00000340993 LAMB4A4D0S4 1761 aa17.18■□□□□ 0.34
TUBD1-202ENST00000340993 CASZ1Q86V15 1759 aa17.18■□□□□ 0.34
TUBD1-202ENST00000340993 STARD3NLO95772 234 aa17.17■□□□□ 0.34
TUBD1-202ENST00000340993 GNAI1P63096 354 aa17.17■□□□□ 0.34
TUBD1-202ENST00000340993 CALD1Q05682 793 aaKnown RBP17.17■□□□□ 0.34
TUBD1-202ENST00000340993 CCDC27Q2M243 656 aa17.17■□□□□ 0.34
TUBD1-202ENST00000340993 CNTNAP4Q9C0A0 1308 aa17.17■□□□□ 0.34
TUBD1-202ENST00000340993 GIGYF1O75420 1035 aaPredicted RBP17.17■□□□□ 0.34
TUBD1-202ENST00000340993 ANXA1P04083 346 aa17.17■□□□□ 0.34
TUBD1-202ENST00000340993 VSIG10Q8N0Z9 540 aa17.17■□□□□ 0.34
TUBD1-202ENST00000340993 ZNF853P0CG23 659 aa17.16■□□□□ 0.34
TUBD1-202ENST00000340993 MYL6BP14649 208 aa17.16■□□□□ 0.34
TUBD1-202ENST00000340993 SRP68Q9UHB9 627 aaKnown RBP17.16■□□□□ 0.34
TUBD1-202ENST00000340993 C4AP0C0L4 1744 aa17.16■□□□□ 0.34
TUBD1-202ENST00000340993 CICQ96RK0 1608 aaPredicted RBP17.16■□□□□ 0.34
TUBD1-202ENST00000340993 QSER1Q2KHR3 1735 aa17.15■□□□□ 0.34
TUBD1-202ENST00000340993 TCERG1O14776 1098 aaKnown RBP17.15■□□□□ 0.34
TUBD1-202ENST00000340993 YTHDC1Q96MU7 727 aaKnown RBP17.15■□□□□ 0.34
TUBD1-202ENST00000340993 TRAPPC3LQ5T215 181 aa17.15■□□□□ 0.34
TUBD1-202ENST00000340993 CDCA7LQ96GN5 454 aa17.15■□□□□ 0.34
TUBD1-202ENST00000340993 FANCIQ9NVI1 1328 aa17.14■□□□□ 0.33
TUBD1-202ENST00000340993 TSPYL6Q8N831 410 aa17.14■□□□□ 0.33
TUBD1-202ENST00000340993 C8orf58Q8NAV2 365 aa17.14■□□□□ 0.33
TUBD1-202ENST00000340993 ARHGEF1Q92888 912 aaKnown RBP17.14■□□□□ 0.33
TUBD1-202ENST00000340993 RPS6KA4O75676 772 aa17.13■□□□□ 0.33
TUBD1-202ENST00000340993 DUSP27Q5VZP5 1158 aa17.13■□□□□ 0.33
TUBD1-202ENST00000340993 TEX13AQ9BXU3 409 aaPredicted RBP17.13■□□□□ 0.33
TUBD1-202ENST00000340993 COL15A1P39059 1388 aa17.12■□□□□ 0.33
TUBD1-202ENST00000340993 SSFA2P28290 1259 aa17.12■□□□□ 0.33
TUBD1-202ENST00000340993 RFC4P35249 363 aa17.12■□□□□ 0.33
TUBD1-202ENST00000340993 RC3H1Q5TC82 1133 aaKnown RBP17.12■□□□□ 0.33
TUBD1-202ENST00000340993 WDR63Q8IWG1 891 aa17.12■□□□□ 0.33
TUBD1-202ENST00000340993 TBC1D2BQ9UPU7 963 aa17.12■□□□□ 0.33
TUBD1-202ENST00000340993 SOS1Q07889 1333 aaPredicted RBP17.12■□□□□ 0.33
TUBD1-202ENST00000340993 NBPF26B4DH59 902 aa17.12■□□□□ 0.33
TUBD1-202ENST00000340993 PROSER3Q2NL68 480 aa17.12■□□□□ 0.33
TUBD1-202ENST00000340993 NBPF10Q6P3W6 841 aaKnown RBP17.12■□□□□ 0.33
TUBD1-202ENST00000340993 NBPF15Q8N660 670 aa17.12■□□□□ 0.33
TUBD1-202ENST00000340993 BABAM1Q9NWV8 329 aa17.12■□□□□ 0.33
TUBD1-202ENST00000340993 HDGFL1Q5TGJ6 251 aa17.11■□□□□ 0.33
TUBD1-202ENST00000340993 NPM2Q86SE8 214 aaKnown RBP17.11■□□□□ 0.33
TUBD1-202ENST00000340993 ZNF521Q96K83 1311 aa17.11■□□□□ 0.33
TUBD1-202ENST00000340993 EXOSC9Q06265 439 aaKnown RBP17.1■□□□□ 0.33
TUBD1-202ENST00000340993 GOLGA2Q08379 1002 aa17.1■□□□□ 0.33
TUBD1-202ENST00000340993 USPL1Q5W0Q7 1092 aa17.1■□□□□ 0.33
TUBD1-202ENST00000340993 KLHL34Q8N239 644 aa17.1■□□□□ 0.33
TUBD1-202ENST00000340993 CHPF2Q9P2E5 772 aa17.1■□□□□ 0.33
TUBD1-202ENST00000340993 IL16Q14005 1332 aa17.09■□□□□ 0.33
TUBD1-202ENST00000340993 GOLGB1Q14789 3259 aaKnown RBP17.09■□□□□ 0.33
TUBD1-202ENST00000340993 AIMP1Q12904 312 aaKnown RBP17.09■□□□□ 0.33
TUBD1-202ENST00000340993 ZPR1O75312 459 aa17.08■□□□□ 0.33
TUBD1-202ENST00000340993 BICDL1Q6ZP65 573 aa17.08■□□□□ 0.33
TUBD1-202ENST00000340993 ZNF428Q96B54 188 aa17.08■□□□□ 0.33
TUBD1-202ENST00000340993 MYH16Q9H6N6 1097 aa17.08■□□□□ 0.33
TUBD1-202ENST00000340993 EIF5P55010 431 aaKnown RBP17.07■□□□□ 0.32
TUBD1-202ENST00000340993 TWISTNBQ3B726 338 aaPredicted RBP17.07■□□□□ 0.32
TUBD1-202ENST00000340993 FLAD1Q8NFF5 587 aa17.07■□□□□ 0.32
TUBD1-202ENST00000340993 MTFR1LQ9H019 292 aa17.07■□□□□ 0.32
TUBD1-202ENST00000340993 PPP1R1BQ9UD71 204 aaPredicted RBP17.07■□□□□ 0.32
TUBD1-202ENST00000340993 DZIP3Q86Y13 1208 aaKnown RBP17.07■□□□□ 0.32
TUBD1-202ENST00000340993 SPON1Q9HCB6 807 aa17.07■□□□□ 0.32
TUBD1-202ENST00000340993 HMGB2P26583 209 aaKnown RBP17.06■□□□□ 0.32
TUBD1-202ENST00000340993 IL6STP40189 918 aaPredicted RBP17.06■□□□□ 0.32
TUBD1-202ENST00000340993 FKBP8Q14318 412 aa17.06■□□□□ 0.32
TUBD1-202ENST00000340993 TTLL7Q6ZT98 887 aa17.06■□□□□ 0.32
TUBD1-202ENST00000340993 USP42Q9H9J4 1324 aaKnown RBP17.06■□□□□ 0.32
TUBD1-202ENST00000340993 GYS1P13807 737 aa17.05■□□□□ 0.32
TUBD1-202ENST00000340993 NCBP3Q53F19 620 aaKnown RBP17.05■□□□□ 0.32
TUBD1-202ENST00000340993 ZBTB3Q9H5J0 574 aa17.05■□□□□ 0.32
TUBD1-202ENST00000340993 E9PSI1 815 aa17.05■□□□□ 0.32
TUBD1-202ENST00000340993 ADRA2BP18089 450 aa17.05■□□□□ 0.32
TUBD1-202ENST00000340993 SLFN5Q08AF3 891 aa17.05■□□□□ 0.32
TUBD1-202ENST00000340993 PDIA6Q15084 440 aa17.05■□□□□ 0.32
TUBD1-202ENST00000340993 FAM177BA6PVY3 158 aa17.03■□□□□ 0.32
TUBD1-202ENST00000340993 MMP10P09238 476 aa17.03■□□□□ 0.32
TUBD1-202ENST00000340993 PTGER2P43116 358 aa17.03■□□□□ 0.32
TUBD1-202ENST00000340993 XAGE3Q8WTP9 111 aa17.03■□□□□ 0.32
TUBD1-202ENST00000340993 BCORQ6W2J9 1755 aa17.03■□□□□ 0.32
TUBD1-202ENST00000340993 SCN7AQ01118 1682 aa17.03■□□□□ 0.32
TUBD1-202ENST00000340993 POLD1P28340 1107 aa17.02■□□□□ 0.32
TUBD1-202ENST00000340993 PHAXQ9H814 394 aaKnown RBP17.02■□□□□ 0.32
TUBD1-202ENST00000340993 BCL2L12Q9HB09 334 aa17.02■□□□□ 0.32
TUBD1-202ENST00000340993 NARFQ9UHQ1 456 aa17.02■□□□□ 0.32
TUBD1-202ENST00000340993 A0A087WZG4 1122 aa17.02■□□□□ 0.31
TUBD1-202ENST00000340993 CAMTA2O94983 1202 aa17.02■□□□□ 0.31
TUBD1-202ENST00000340993 HLFQ16534 295 aa17.02■□□□□ 0.31
TUBD1-202ENST00000340993 KIF6Q6ZMV9 814 aa17.02■□□□□ 0.31
TUBD1-202ENST00000340993 COPS6Q7L5N1 327 aa17.02■□□□□ 0.31
TUBD1-202ENST00000340993 SLC16A10Q8TF71 515 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms