RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 C4AP0C0L4 1744 aa17.69■□□□□ 0.42
SIRPB3P-201ENST00000340424 STARD3NLO95772 234 aa17.69■□□□□ 0.42
SIRPB3P-201ENST00000340424 CYP19A1P11511 503 aaPredicted RBP17.69■□□□□ 0.42
SIRPB3P-201ENST00000340424 INTS5Q6P9B9 1019 aaKnown RBP17.69■□□□□ 0.42
SIRPB3P-201ENST00000340424 SMIM5Q71RC9 77 aa17.69■□□□□ 0.42
SIRPB3P-201ENST00000340424 MAPK8IP3Q9UPT6 1336 aa17.68■□□□□ 0.42
SIRPB3P-201ENST00000340424 HEG1Q9ULI3 1381 aa17.67■□□□□ 0.42
SIRPB3P-201ENST00000340424 BTBD11A6QL63 1104 aa17.67■□□□□ 0.42
SIRPB3P-201ENST00000340424 FMNL2Q96PY5 1086 aa17.67■□□□□ 0.42
SIRPB3P-201ENST00000340424 PLEKHF1Q96S99 279 aa17.67■□□□□ 0.42
SIRPB3P-201ENST00000340424 SOS1Q07889 1333 aaPredicted RBP17.67■□□□□ 0.42
SIRPB3P-201ENST00000340424 USP42Q9H9J4 1324 aaKnown RBP17.67■□□□□ 0.42
SIRPB3P-201ENST00000340424 MMP10P09238 476 aa17.66■□□□□ 0.42
SIRPB3P-201ENST00000340424 GYS1P13807 737 aa17.66■□□□□ 0.42
SIRPB3P-201ENST00000340424 ZNF496Q96IT1 587 aaPredicted RBP17.66■□□□□ 0.42
SIRPB3P-201ENST00000340424 GPR162Q16538 588 aa17.65■□□□□ 0.42
SIRPB3P-201ENST00000340424 NLGN2Q8NFZ4 835 aa17.65■□□□□ 0.42
SIRPB3P-201ENST00000340424 ZPR1O75312 459 aa17.64■□□□□ 0.41
SIRPB3P-201ENST00000340424 YY1P25490 414 aa17.64■□□□□ 0.41
SIRPB3P-201ENST00000340424 NFE2L2Q16236 605 aa17.64■□□□□ 0.41
SIRPB3P-201ENST00000340424 MCM10Q7L590 875 aa17.64■□□□□ 0.41
SIRPB3P-201ENST00000340424 COL15A1P39059 1388 aa17.64■□□□□ 0.41
SIRPB3P-201ENST00000340424 PNISRQ8TF01 805 aaKnown RBP17.63■□□□□ 0.41
SIRPB3P-201ENST00000340424 PRKRIP1Q9H875 184 aaPredicted RBP17.63■□□□□ 0.41
SIRPB3P-201ENST00000340424 ZBTB1Q9Y2K1 713 aa17.63■□□□□ 0.41
SIRPB3P-201ENST00000340424 A0A087WZG4 1122 aa17.62■□□□□ 0.41
SIRPB3P-201ENST00000340424 GRIN3BO60391 1043 aa17.62■□□□□ 0.41
SIRPB3P-201ENST00000340424 TAF7Q15545 349 aaPredicted RBP17.62■□□□□ 0.41
SIRPB3P-201ENST00000340424 PARP3Q9Y6F1 533 aa17.62■□□□□ 0.41
SIRPB3P-201ENST00000340424 KIF13BQ9NQT8 1826 aa17.62■□□□□ 0.41
SIRPB3P-201ENST00000340424 DLG5Q8TDM6 1919 aa17.62■□□□□ 0.41
SIRPB3P-201ENST00000340424 NARFQ9UHQ1 456 aa17.61■□□□□ 0.41
SIRPB3P-201ENST00000340424 CHD4Q14839 1912 aa17.6■□□□□ 0.41
SIRPB3P-201ENST00000340424 WDR43Q15061 677 aaKnown RBP eCLIP17.6■□□□□ 0.41
SIRPB3P-201ENST00000340424 SRP68Q9UHB9 627 aaKnown RBP17.6■□□□□ 0.41
SIRPB3P-201ENST00000340424 C10orf71Q711Q0 1435 aa17.6■□□□□ 0.41
SIRPB3P-201ENST00000340424 SNRPA1P09661 255 aaKnown RBP17.59■□□□□ 0.41
SIRPB3P-201ENST00000340424 IL6STP40189 918 aaPredicted RBP17.59■□□□□ 0.41
SIRPB3P-201ENST00000340424 EIF5P55010 431 aaKnown RBP17.59■□□□□ 0.41
SIRPB3P-201ENST00000340424 TGFB2P61812 414 aa17.59■□□□□ 0.41
SIRPB3P-201ENST00000340424 LMOD3Q0VAK6 560 aa17.59■□□□□ 0.41
SIRPB3P-201ENST00000340424 DCTN1Q14203 1278 aa17.59■□□□□ 0.41
SIRPB3P-201ENST00000340424 FKBP8Q14318 412 aa17.59■□□□□ 0.41
SIRPB3P-201ENST00000340424 NPM2Q86SE8 214 aaKnown RBP17.59■□□□□ 0.41
SIRPB3P-201ENST00000340424 PELP1Q8IZL8 1130 aaKnown RBP17.59■□□□□ 0.41
SIRPB3P-201ENST00000340424 CANXP27824 592 aaKnown RBP17.58■□□□□ 0.4
SIRPB3P-201ENST00000340424 USPL1Q5W0Q7 1092 aa17.58■□□□□ 0.4
SIRPB3P-201ENST00000340424 KCNQ3O43525 872 aa17.57■□□□□ 0.4
SIRPB3P-201ENST00000340424 CACNB1Q02641 598 aaPredicted RBP17.57■□□□□ 0.4
SIRPB3P-201ENST00000340424 KDM3BQ7LBC6 1761 aa17.56■□□□□ 0.4
SIRPB3P-201ENST00000340424 TM4SF1P30408 202 aa17.56■□□□□ 0.4
SIRPB3P-201ENST00000340424 PXDNLA1KZ92 1463 aa17.56■□□□□ 0.4
SIRPB3P-201ENST00000340424 SCN7AQ01118 1682 aa17.55■□□□□ 0.4
SIRPB3P-201ENST00000340424 YBX3P16989 372 aaKnown RBP eCLIP17.55■□□□□ 0.4
SIRPB3P-201ENST00000340424 RIPK4P57078 832 aa17.55■□□□□ 0.4
SIRPB3P-201ENST00000340424 BABAM1Q9NWV8 329 aa17.55■□□□□ 0.4
SIRPB3P-201ENST00000340424 LAMB4A4D0S4 1761 aa17.54■□□□□ 0.4
SIRPB3P-201ENST00000340424 ZNF316A6NFI3 1004 aaPredicted RBP17.54■□□□□ 0.4
SIRPB3P-201ENST00000340424 POLRMTO00411 1230 aaKnown RBP17.54■□□□□ 0.4
SIRPB3P-201ENST00000340424 DDR1Q08345 913 aa17.54■□□□□ 0.4
SIRPB3P-201ENST00000340424 RUNDC1Q96C34 613 aa17.54■□□□□ 0.4
SIRPB3P-201ENST00000340424 KIAA1551Q9HCM1 1747 aa17.53■□□□□ 0.4
SIRPB3P-201ENST00000340424 A1BGP04217 495 aa17.53■□□□□ 0.4
SIRPB3P-201ENST00000340424 TMPOP42166 694 aaKnown RBP17.53■□□□□ 0.4
SIRPB3P-201ENST00000340424 USP16Q9Y5T5 823 aa17.53■□□□□ 0.4
SIRPB3P-201ENST00000340424 RGL2O15211 777 aa17.52■□□□□ 0.4
SIRPB3P-201ENST00000340424 NFIXQ14938 502 aa17.52■□□□□ 0.4
SIRPB3P-201ENST00000340424 BCL2L12Q9HB09 334 aa17.52■□□□□ 0.4
SIRPB3P-201ENST00000340424 NRXN2Q9P2S2 1712 aa17.52■□□□□ 0.39
SIRPB3P-201ENST00000340424 ADAMTS8Q9UP79 889 aa17.51■□□□□ 0.39
SIRPB3P-201ENST00000340424 ZNF330Q9Y3S2 320 aaPredicted RBP17.51■□□□□ 0.39
SIRPB3P-201ENST00000340424 EIF4A1P60842 406 aaKnown RBP17.5■□□□□ 0.39
SIRPB3P-201ENST00000340424 THUMPD2Q9BTF0 503 aaKnown RBP17.5■□□□□ 0.39
SIRPB3P-201ENST00000340424 MIS18AQ9NYP9 233 aa17.5■□□□□ 0.39
SIRPB3P-201ENST00000340424 BCORQ6W2J9 1755 aa17.5■□□□□ 0.39
SIRPB3P-201ENST00000340424 N4BP2Q86UW6 1770 aaPredicted RBP17.49■□□□□ 0.39
SIRPB3P-201ENST00000340424 GIGYF1O75420 1035 aaPredicted RBP17.49■□□□□ 0.39
SIRPB3P-201ENST00000340424 CLEC4GQ6UXB4 293 aa17.49■□□□□ 0.39
SIRPB3P-201ENST00000340424 DZIP3Q86Y13 1208 aaKnown RBP17.49■□□□□ 0.39
SIRPB3P-201ENST00000340424 CCDC146Q8IYE0 955 aa17.49■□□□□ 0.39
SIRPB3P-201ENST00000340424 TSPYL4Q9UJ04 414 aa17.49■□□□□ 0.39
SIRPB3P-201ENST00000340424 ZNF652Q9Y2D9 606 aa17.49■□□□□ 0.39
SIRPB3P-201ENST00000340424 CARMIL3Q8ND23 1372 aa17.49■□□□□ 0.39
SIRPB3P-201ENST00000340424 BRCA1P38398 1863 aaKnown RBP17.48■□□□□ 0.39
SIRPB3P-201ENST00000340424 A0A0G2JLW4 131 aa17.48■□□□□ 0.39
SIRPB3P-201ENST00000340424 PRAMEF22A3QJZ6 481 aa17.48■□□□□ 0.39
SIRPB3P-201ENST00000340424 CAMTA2O94983 1202 aa17.48■□□□□ 0.39
SIRPB3P-201ENST00000340424 TBC1D2BQ9UPU7 963 aa17.48■□□□□ 0.39
SIRPB3P-201ENST00000340424 AFDNP55196 1824 aaKnown RBP17.48■□□□□ 0.39
SIRPB3P-201ENST00000340424 ERBB4Q15303 1308 aa17.47■□□□□ 0.39
SIRPB3P-201ENST00000340424 SERPINB2P05120 415 aa17.47■□□□□ 0.39
SIRPB3P-201ENST00000340424 DPEP1P16444 411 aa17.47■□□□□ 0.39
SIRPB3P-201ENST00000340424 PIM2Q9P1W9 311 aa17.47■□□□□ 0.39
SIRPB3P-201ENST00000340424 PDZRN3Q9UPQ7 1066 aa17.47■□□□□ 0.39
SIRPB3P-201ENST00000340424 POLA2Q14181 598 aa17.46■□□□□ 0.39
SIRPB3P-201ENST00000340424 ZNF784Q8NCA9 323 aaPredicted RBP17.46■□□□□ 0.39
SIRPB3P-201ENST00000340424 SETDB2Q96T68 719 aa17.46■□□□□ 0.39
SIRPB3P-201ENST00000340424 NBPF26B4DH59 902 aa17.45■□□□□ 0.38
SIRPB3P-201ENST00000340424 NEUROD2Q15784 382 aa17.45■□□□□ 0.38
SIRPB3P-201ENST00000340424 TBC1D9BQ66K14 1250 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms