RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 TSPYL6Q8N831 410 aa19.24■□□□□ 0.67
TUBB4B-201ENST00000340384 ZNF496Q96IT1 587 aaPredicted RBP19.24■□□□□ 0.67
TUBB4B-201ENST00000340384 SLC4A9Q96Q91 983 aa19.24■□□□□ 0.67
TUBB4B-201ENST00000340384 KAT6BQ8WYB5 2073 aa19.23■□□□□ 0.67
TUBB4B-201ENST00000340384 PDE4AP27815 886 aa19.23■□□□□ 0.67
TUBB4B-201ENST00000340384 TNNQ9UQP3 1299 aa19.23■□□□□ 0.67
TUBB4B-201ENST00000340384 KCPQ6ZWJ8 1503 aa19.23■□□□□ 0.67
TUBB4B-201ENST00000340384 API5Q9BZZ5 524 aaKnown RBP19.22■□□□□ 0.67
TUBB4B-201ENST00000340384 PRAMEF22A3QJZ6 481 aa19.22■□□□□ 0.67
TUBB4B-201ENST00000340384 IGHDP01880 384 aa19.22■□□□□ 0.67
TUBB4B-201ENST00000340384 ANP32AP39687 249 aaKnown RBP19.22■□□□□ 0.67
TUBB4B-201ENST00000340384 BTAF1O14981 1849 aa19.21■□□□□ 0.67
TUBB4B-201ENST00000340384 BACH2Q9BYV9 841 aa19.21■□□□□ 0.67
TUBB4B-201ENST00000340384 ELL2O00472 640 aaPredicted RBP19.2■□□□□ 0.66
TUBB4B-201ENST00000340384 PTCD1O75127 700 aaKnown RBP19.2■□□□□ 0.66
TUBB4B-201ENST00000340384 ILDR2Q71H61 639 aa19.2■□□□□ 0.66
TUBB4B-201ENST00000340384 TMEM57Q8N5G2 664 aa19.2■□□□□ 0.66
TUBB4B-201ENST00000340384 UBR2Q8IWV8 1755 aa19.2■□□□□ 0.66
TUBB4B-201ENST00000340384 SOS1Q07889 1333 aaPredicted RBP19.18■□□□□ 0.66
TUBB4B-201ENST00000340384 GIGYF1O75420 1035 aaPredicted RBP19.18■□□□□ 0.66
TUBB4B-201ENST00000340384 PCDHB15Q9Y5E8 787 aa19.18■□□□□ 0.66
TUBB4B-201ENST00000340384 PALLDQ8WX93 1383 aa19.18■□□□□ 0.66
TUBB4B-201ENST00000340384 TTC5Q8N0Z6 440 aa19.18■□□□□ 0.66
TUBB4B-201ENST00000340384 HDAC1Q13547 482 aaPredicted RBP19.17■□□□□ 0.66
TUBB4B-201ENST00000340384 PROM2Q8N271 834 aa19.17■□□□□ 0.66
TUBB4B-201ENST00000340384 KCNQ4P56696 695 aa19.16■□□□□ 0.66
TUBB4B-201ENST00000340384 FMNL2Q96PY5 1086 aa19.16■□□□□ 0.66
TUBB4B-201ENST00000340384 ABCC4O15439 1325 aa19.15■□□□□ 0.66
TUBB4B-201ENST00000340384 FAM161AQ3B820 660 aa19.15■□□□□ 0.66
TUBB4B-201ENST00000340384 RBM42Q9BTD8 480 aaKnown RBP19.15■□□□□ 0.66
TUBB4B-201ENST00000340384 USP16Q9Y5T5 823 aa19.15■□□□□ 0.66
TUBB4B-201ENST00000340384 TNS1Q9HBL0 1735 aaKnown RBP19.15■□□□□ 0.66
TUBB4B-201ENST00000340384 LOC102724428A0A0B4J2F2 783 aa19.14■□□□□ 0.66
TUBB4B-201ENST00000340384 RGS3P49796 1198 aa19.14■□□□□ 0.66
TUBB4B-201ENST00000340384 SIK1P57059 783 aa19.14■□□□□ 0.66
TUBB4B-201ENST00000340384 ITPK1Q13572 414 aa19.14■□□□□ 0.66
TUBB4B-201ENST00000340384 SMARCC1Q92922 1105 aaPredicted RBP19.14■□□□□ 0.66
TUBB4B-201ENST00000340384 ZBTB40Q9NUA8 1239 aa19.14■□□□□ 0.66
TUBB4B-201ENST00000340384 PTPRCP08575 1304 aa19.14■□□□□ 0.65
TUBB4B-201ENST00000340384 APBA3O96018 575 aa19.14■□□□□ 0.65
TUBB4B-201ENST00000340384 SNRPA1P09661 255 aaKnown RBP19.13■□□□□ 0.65
TUBB4B-201ENST00000340384 DNAJC10Q8IXB1 793 aa19.13■□□□□ 0.65
TUBB4B-201ENST00000340384 VSIG10Q8N0Z9 540 aa19.13■□□□□ 0.65
TUBB4B-201ENST00000340384 LRRC4BQ9NT99 713 aa19.13■□□□□ 0.65
TUBB4B-201ENST00000340384 C5P01031 1676 aa19.12■□□□□ 0.65
TUBB4B-201ENST00000340384 PLSCR1O15162 318 aa19.12■□□□□ 0.65
TUBB4B-201ENST00000340384 CHMP4AQ9BY43 222 aa19.11■□□□□ 0.65
TUBB4B-201ENST00000340384 LY75O60449 1722 aa19.11■□□□□ 0.65
TUBB4B-201ENST00000340384 CACNA1FO60840 1977 aa19.11■□□□□ 0.65
TUBB4B-201ENST00000340384 ATP6V1AP38606 617 aa19.11■□□□□ 0.65
TUBB4B-201ENST00000340384 HOXB7P09629 217 aa19.1■□□□□ 0.65
TUBB4B-201ENST00000340384 NECTIN2Q92692 538 aa19.1■□□□□ 0.65
TUBB4B-201ENST00000340384 TJP1Q07157 1748 aa19.1■□□□□ 0.65
TUBB4B-201ENST00000340384 CYP19A1P11511 503 aaPredicted RBP19.09■□□□□ 0.65
TUBB4B-201ENST00000340384 EIF2S2P20042 333 aaKnown RBP19.09■□□□□ 0.65
TUBB4B-201ENST00000340384 CAMKK2Q96RR4 588 aa19.09■□□□□ 0.65
TUBB4B-201ENST00000340384 ZBTB7BO15156 539 aaPredicted RBP19.08■□□□□ 0.65
TUBB4B-201ENST00000340384 PDIA6Q15084 440 aa19.08■□□□□ 0.65
TUBB4B-201ENST00000340384 TXNRD1Q16881 649 aa19.08■□□□□ 0.65
TUBB4B-201ENST00000340384 ERICH6Q7L0X2 663 aa19.08■□□□□ 0.65
TUBB4B-201ENST00000340384 DEFB132Q7Z7B7 95 aa19.08■□□□□ 0.65
TUBB4B-201ENST00000340384 SKAP1Q86WV1 359 aa19.08■□□□□ 0.65
TUBB4B-201ENST00000340384 LINC00116Q8NCU8 138 aa19.08■□□□□ 0.65
TUBB4B-201ENST00000340384 STK31Q9BXU1 1019 aa19.08■□□□□ 0.65
TUBB4B-201ENST00000340384 PDZRN3Q9UPQ7 1066 aa19.08■□□□□ 0.65
TUBB4B-201ENST00000340384 EN1Q05925 392 aaPredicted RBP19.07■□□□□ 0.64
TUBB4B-201ENST00000340384 UPF1Q92900 1129 aaKnown RBP eCLIP19.07■□□□□ 0.64
TUBB4B-201ENST00000340384 CCNL1Q9UK58 526 aaPredicted RBP19.07■□□□□ 0.64
TUBB4B-201ENST00000340384 CICQ96RK0 1608 aaPredicted RBP19.07■□□□□ 0.64
TUBB4B-201ENST00000340384 ZNF831Q5JPB2 1677 aa19.07■□□□□ 0.64
TUBB4B-201ENST00000340384 NBPF26B4DH59 902 aa19.07■□□□□ 0.64
TUBB4B-201ENST00000340384 A1BGP04217 495 aa19.07■□□□□ 0.64
TUBB4B-201ENST00000340384 PIP4K2AP48426 406 aaPredicted RBP19.07■□□□□ 0.64
TUBB4B-201ENST00000340384 PROSER3Q2NL68 480 aa19.07■□□□□ 0.64
TUBB4B-201ENST00000340384 HDGFL1Q5TGJ6 251 aa19.07■□□□□ 0.64
TUBB4B-201ENST00000340384 NBPF14Q5TI25 921 aa19.07■□□□□ 0.64
TUBB4B-201ENST00000340384 CCDC30Q5VVM6 783 aa19.07■□□□□ 0.64
TUBB4B-201ENST00000340384 INTS3Q68E01 1043 aaKnown RBP19.07■□□□□ 0.64
TUBB4B-201ENST00000340384 NBPF10Q6P3W6 841 aaKnown RBP19.07■□□□□ 0.64
TUBB4B-201ENST00000340384 LRP10Q7Z4F1 713 aa19.07■□□□□ 0.64
TUBB4B-201ENST00000340384 NBPF15Q8N660 670 aa19.07■□□□□ 0.64
TUBB4B-201ENST00000340384 EZH2Q15910 746 aaKnown RBP19.06■□□□□ 0.64
TUBB4B-201ENST00000340384 INTS5Q6P9B9 1019 aaKnown RBP19.06■□□□□ 0.64
TUBB4B-201ENST00000340384 SMC5Q8IY18 1101 aa19.06■□□□□ 0.64
TUBB4B-201ENST00000340384 IPO9Q96P70 1041 aaKnown RBP19.06■□□□□ 0.64
TUBB4B-201ENST00000340384 ANXA1P04083 346 aa19.05■□□□□ 0.64
TUBB4B-201ENST00000340384 TEX13AQ9BXU3 409 aaPredicted RBP19.05■□□□□ 0.64
TUBB4B-201ENST00000340384 CHPF2Q9P2E5 772 aa19.04■□□□□ 0.64
TUBB4B-201ENST00000340384 SLC4A2P04920 1241 aa19.03■□□□□ 0.64
TUBB4B-201ENST00000340384 C8orf34Q49A92 452 aa19.03■□□□□ 0.64
TUBB4B-201ENST00000340384 SLC27A3Q5K4L6 730 aa19.03■□□□□ 0.64
TUBB4B-201ENST00000340384 AMIGO3Q86WK7 504 aa19.03■□□□□ 0.64
TUBB4B-201ENST00000340384 CCDC125Q86Z20 511 aa19.03■□□□□ 0.64
TUBB4B-201ENST00000340384 GCC1Q96CN9 775 aa19.03■□□□□ 0.64
TUBB4B-201ENST00000340384 COL5A3P25940 1745 aaPredicted RBP19.03■□□□□ 0.64
TUBB4B-201ENST00000340384 LAMB4A4D0S4 1761 aa19.03■□□□□ 0.64
TUBB4B-201ENST00000340384 CRKLP46109 303 aaKnown RBP19.03■□□□□ 0.64
TUBB4B-201ENST00000340384 G2E3Q7L622 706 aa19.03■□□□□ 0.64
TUBB4B-201ENST00000340384 DDRGK1Q96HY6 314 aa19.03■□□□□ 0.64
TUBB4B-201ENST00000340384 ZBTB1Q9Y2K1 713 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms