RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 CADPS2Q86UW7 1296 aa13.18□□□□□ -0.3
TRAF3IP2-201ENST00000340026 PHAXQ9H814 394 aaKnown RBP13.18□□□□□ -0.3
TRAF3IP2-201ENST00000340026 HYPKQ9NX55 129 aa13.18□□□□□ -0.3
TRAF3IP2-201ENST00000340026 AXIN2Q9Y2T1 843 aa13.18□□□□□ -0.3
TRAF3IP2-201ENST00000340026 LAMB4A4D0S4 1761 aa13.18□□□□□ -0.3
TRAF3IP2-201ENST00000340026 CHPF2Q9P2E5 772 aa13.17□□□□□ -0.3
TRAF3IP2-201ENST00000340026 ISY1Q9ULR0 285 aaKnown RBP13.17□□□□□ -0.3
TRAF3IP2-201ENST00000340026 COL15A1P39059 1388 aa13.17□□□□□ -0.3
TRAF3IP2-201ENST00000340026 HSP90AB1P08238 724 aaKnown RBP13.17□□□□□ -0.3
TRAF3IP2-201ENST00000340026 RBM33Q96EV2 1170 aaKnown RBP13.17□□□□□ -0.3
TRAF3IP2-201ENST00000340026 BCL11AQ9H165 835 aa13.17□□□□□ -0.3
TRAF3IP2-201ENST00000340026 C5P01031 1676 aa13.17□□□□□ -0.3
TRAF3IP2-201ENST00000340026 ATF3P18847 181 aa13.16□□□□□ -0.3
TRAF3IP2-201ENST00000340026 KDM6AO15550 1401 aaPredicted RBP13.16□□□□□ -0.3
TRAF3IP2-201ENST00000340026 KSR2Q6VAB6 950 aa13.16□□□□□ -0.3
TRAF3IP2-201ENST00000340026 AK9Q5TCS8 1911 aa13.16□□□□□ -0.3
TRAF3IP2-201ENST00000340026 GLI3P10071 1580 aa13.16□□□□□ -0.3
TRAF3IP2-201ENST00000340026 KIF1BPQ96EK5 621 aa13.15□□□□□ -0.3
TRAF3IP2-201ENST00000340026 EXOC6BQ9Y2D4 811 aa13.15□□□□□ -0.3
TRAF3IP2-201ENST00000340026 MCM2P49736 904 aa13.15□□□□□ -0.3
TRAF3IP2-201ENST00000340026 MPRIPQ6WCQ1 1025 aa13.15□□□□□ -0.3
TRAF3IP2-201ENST00000340026 CWC22Q9HCG8 908 aaKnown RBP13.15□□□□□ -0.3
TRAF3IP2-201ENST00000340026 DDX21Q9NR30 783 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRAF3IP2-201ENST00000340026 PI4KAP2A4QPH2 592 aa13.15□□□□□ -0.31
TRAF3IP2-201ENST00000340026 CD2BP2O95400 341 aaKnown RBP13.15□□□□□ -0.31
TRAF3IP2-201ENST00000340026 PI4KAP1Q8N8J0 262 aa13.15□□□□□ -0.31
TRAF3IP2-201ENST00000340026 ESYT1Q9BSJ8 1104 aa13.15□□□□□ -0.31
TRAF3IP2-201ENST00000340026 PPP1R42Q7Z4L9 355 aa13.14□□□□□ -0.31
TRAF3IP2-201ENST00000340026 GBP4Q96PP9 640 aa13.14□□□□□ -0.31
TRAF3IP2-201ENST00000340026 SPG7Q9UQ90 795 aa13.14□□□□□ -0.31
TRAF3IP2-201ENST00000340026 SPATA31A3Q5VYP0 1347 aa13.14□□□□□ -0.31
TRAF3IP2-201ENST00000340026 TTC41PQ6P2S7 1318 aa13.14□□□□□ -0.31
TRAF3IP2-201ENST00000340026 MEGF6O75095 1541 aa13.14□□□□□ -0.31
TRAF3IP2-201ENST00000340026 KCNQ3O43525 872 aa13.14□□□□□ -0.31
TRAF3IP2-201ENST00000340026 ST18O60284 1047 aa13.14□□□□□ -0.31
TRAF3IP2-201ENST00000340026 SLC52A2Q9HAB3 445 aa13.13□□□□□ -0.31
TRAF3IP2-201ENST00000340026 PAPPAQ13219 1627 aa13.13□□□□□ -0.31
TRAF3IP2-201ENST00000340026 UBR2Q8IWV8 1755 aa13.13□□□□□ -0.31
TRAF3IP2-201ENST00000340026 CYP2E1P05181 493 aaPredicted RBP13.13□□□□□ -0.31
TRAF3IP2-201ENST00000340026 PHKG2P15735 406 aa13.13□□□□□ -0.31
TRAF3IP2-201ENST00000340026 CHMLP26374 656 aa13.13□□□□□ -0.31
TRAF3IP2-201ENST00000340026 SKOR2Q2VWA4 1001 aaPredicted RBP13.13□□□□□ -0.31
TRAF3IP2-201ENST00000340026 L1TD1Q5T7N2 865 aaKnown RBP13.13□□□□□ -0.31
TRAF3IP2-201ENST00000340026 LINS1Q8NG48 757 aa13.13□□□□□ -0.31
TRAF3IP2-201ENST00000340026 RHPN1Q8TCX5 695 aa13.13□□□□□ -0.31
TRAF3IP2-201ENST00000340026 FSD2A1L4K1 749 aa13.12□□□□□ -0.31
TRAF3IP2-201ENST00000340026 DDX58O95786 925 aaKnown RBP13.12□□□□□ -0.31
TRAF3IP2-201ENST00000340026 TATP17735 454 aaPredicted RBP13.12□□□□□ -0.31
TRAF3IP2-201ENST00000340026 ERC1Q8IUD2 1116 aa13.12□□□□□ -0.31
TRAF3IP2-201ENST00000340026 RAPGEF4Q8WZA2 1011 aa13.12□□□□□ -0.31
TRAF3IP2-201ENST00000340026 NUCB2P80303 420 aa13.12□□□□□ -0.31
TRAF3IP2-201ENST00000340026 PDIA6Q15084 440 aa13.12□□□□□ -0.31
TRAF3IP2-201ENST00000340026 PI4K2BQ8TCG2 481 aa13.12□□□□□ -0.31
TRAF3IP2-201ENST00000340026 TNPO1Q92973 898 aaKnown RBP13.12□□□□□ -0.31
TRAF3IP2-201ENST00000340026 ABCA3Q99758 1704 aa13.12□□□□□ -0.31
TRAF3IP2-201ENST00000340026 NBPF7P0C2Y1 421 aaPredicted RBP13.11□□□□□ -0.31
TRAF3IP2-201ENST00000340026 EIF2S2P20042 333 aaKnown RBP13.11□□□□□ -0.31
TRAF3IP2-201ENST00000340026 ZNF790Q6PG37 636 aa13.11□□□□□ -0.31
TRAF3IP2-201ENST00000340026 IFNL2Q8IZJ0 200 aa13.11□□□□□ -0.31
TRAF3IP2-201ENST00000340026 NECTIN2Q92692 538 aa13.11□□□□□ -0.31
TRAF3IP2-201ENST00000340026 MCCP23508 829 aa13.11□□□□□ -0.31
TRAF3IP2-201ENST00000340026 DCAF5Q96JK2 942 aa13.11□□□□□ -0.31
TRAF3IP2-201ENST00000340026 ERBB4Q15303 1308 aa13.1□□□□□ -0.31
TRAF3IP2-201ENST00000340026 XPCQ01831 940 aaPredicted RBP13.1□□□□□ -0.31
TRAF3IP2-201ENST00000340026 RBM42Q9BTD8 480 aaKnown RBP13.1□□□□□ -0.31
TRAF3IP2-201ENST00000340026 SRGAP3O43295 1099 aa13.1□□□□□ -0.31
TRAF3IP2-201ENST00000340026 TRAK2O60296 914 aa13.09□□□□□ -0.31
TRAF3IP2-201ENST00000340026 STRCQ7RTU9 1775 aa13.09□□□□□ -0.31
TRAF3IP2-201ENST00000340026 SURF6O75683 361 aaKnown RBP13.09□□□□□ -0.31
TRAF3IP2-201ENST00000340026 LRP10Q7Z4F1 713 aa13.09□□□□□ -0.31
TRAF3IP2-201ENST00000340026 MAP3K2Q9Y2U5 619 aa13.09□□□□□ -0.31
TRAF3IP2-201ENST00000340026 APBB1O00213 710 aa13.08□□□□□ -0.32
TRAF3IP2-201ENST00000340026 CUL4AQ13619 759 aa13.08□□□□□ -0.32
TRAF3IP2-201ENST00000340026 LARP1Q6PKG0 1096 aaKnown RBP13.08□□□□□ -0.32
TRAF3IP2-201ENST00000340026 INTS4Q96HW7 963 aaKnown RBP13.08□□□□□ -0.32
TRAF3IP2-201ENST00000340026 ARFGEF2Q9Y6D5 1785 aa13.08□□□□□ -0.32
TRAF3IP2-201ENST00000340026 GRM8O00222 908 aa13.08□□□□□ -0.32
TRAF3IP2-201ENST00000340026 GLRX3O76003 335 aaKnown RBP13.08□□□□□ -0.32
TRAF3IP2-201ENST00000340026 SOS2Q07890 1332 aaPredicted RBP13.07□□□□□ -0.32
TRAF3IP2-201ENST00000340026 HSP90AA1P07900 732 aaKnown RBP13.07□□□□□ -0.32
TRAF3IP2-201ENST00000340026 SNRKQ9NRH2 765 aa13.07□□□□□ -0.32
TRAF3IP2-201ENST00000340026 NHSL1Q5SYE7 1610 aa13.07□□□□□ -0.32
TRAF3IP2-201ENST00000340026 SHANK3Q9BYB0 1731 aa13.07□□□□□ -0.32
TRAF3IP2-201ENST00000340026 HSPA4P34932 840 aa13.07□□□□□ -0.32
TRAF3IP2-201ENST00000340026 CNTROBQ8N137 903 aa13.07□□□□□ -0.32
TRAF3IP2-201ENST00000340026 SPRYD3Q8NCJ5 442 aa13.07□□□□□ -0.32
TRAF3IP2-201ENST00000340026 PROSER3Q2NL68 480 aa13.06□□□□□ -0.32
TRAF3IP2-201ENST00000340026 ZBTB7CA1YPR0 619 aa13.06□□□□□ -0.32
TRAF3IP2-201ENST00000340026 SGSM2O43147 1006 aa13.06□□□□□ -0.32
TRAF3IP2-201ENST00000340026 SNRPA1P09661 255 aaKnown RBP13.06□□□□□ -0.32
TRAF3IP2-201ENST00000340026 ZC3H6P61129 1189 aaKnown RBP13.06□□□□□ -0.32
TRAF3IP2-201ENST00000340026 LMOD2Q6P5Q4 547 aa13.06□□□□□ -0.32
TRAF3IP2-201ENST00000340026 RAD50Q92878 1312 aa13.06□□□□□ -0.32
TRAF3IP2-201ENST00000340026 NUP188Q5SRE5 1749 aa13.05□□□□□ -0.32
TRAF3IP2-201ENST00000340026 PLEKHG5O94827 1062 aa13.05□□□□□ -0.32
TRAF3IP2-201ENST00000340026 NKX1-1Q15270 411 aaPredicted RBP13.05□□□□□ -0.32
TRAF3IP2-201ENST00000340026 TICAM2Q86XR7 235 aa13.05□□□□□ -0.32
TRAF3IP2-201ENST00000340026 C9orf78Q9NZ63 289 aaPredicted RBP13.05□□□□□ -0.32
TRAF3IP2-201ENST00000340026 CLASRPQ8N2M8 674 aaKnown RBP13.05□□□□□ -0.32
TRAF3IP2-201ENST00000340026 KCNB2Q92953 911 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms