RNA–Protein interactions for RNA: ENST00000333628.3

TUBB2A-201, Transcript of tubulin beta 2A class IIa, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB2A, Length 1,595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB2A-201ENST00000333628 CALD1Q05682 793 aaKnown RBP17.36■□□□□ 0.37
TUBB2A-201ENST00000333628 MTFR1LQ9H019 292 aa17.36■□□□□ 0.37
TUBB2A-201ENST00000333628 BABAM1Q9NWV8 329 aa17.36■□□□□ 0.37
TUBB2A-201ENST00000333628 MSH5O43196 834 aa17.36■□□□□ 0.37
TUBB2A-201ENST00000333628 PHF14O94880 888 aa17.36■□□□□ 0.37
TUBB2A-201ENST00000333628 PTGER2P43116 358 aa17.36■□□□□ 0.37
TUBB2A-201ENST00000333628 FMNL2Q96PY5 1086 aa17.36■□□□□ 0.37
TUBB2A-201ENST00000333628 TSPYL4Q9UJ04 414 aa17.36■□□□□ 0.37
TUBB2A-201ENST00000333628 COL24A1Q17RW2 1714 aa17.35■□□□□ 0.37
TUBB2A-201ENST00000333628 GNPATO15228 680 aa17.35■□□□□ 0.37
TUBB2A-201ENST00000333628 HMGB2P26583 209 aaKnown RBP17.35■□□□□ 0.37
TUBB2A-201ENST00000333628 VSIG10Q8N0Z9 540 aa17.35■□□□□ 0.37
TUBB2A-201ENST00000333628 CFAP44Q96MT7 982 aa17.35■□□□□ 0.37
TUBB2A-201ENST00000333628 ZNF853P0CG23 659 aa17.34■□□□□ 0.37
TUBB2A-201ENST00000333628 B4GALNT3Q6L9W6 998 aa17.34■□□□□ 0.37
TUBB2A-201ENST00000333628 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.33■□□□□ 0.37
TUBB2A-201ENST00000333628 EIF4A1P60842 406 aaKnown RBP17.33■□□□□ 0.37
TUBB2A-201ENST00000333628 GNAI1P63096 354 aa17.33■□□□□ 0.37
TUBB2A-201ENST00000333628 WDR63Q8IWG1 891 aa17.33■□□□□ 0.37
TUBB2A-201ENST00000333628 DNAJC10Q8IXB1 793 aa17.33■□□□□ 0.37
TUBB2A-201ENST00000333628 SGIP1Q9BQI5 828 aa17.33■□□□□ 0.37
TUBB2A-201ENST00000333628 HEG1Q9ULI3 1381 aa17.33■□□□□ 0.36
TUBB2A-201ENST00000333628 SLC16A10Q8TF71 515 aa17.32■□□□□ 0.36
TUBB2A-201ENST00000333628 IFT57Q9NWB7 429 aa17.32■□□□□ 0.36
TUBB2A-201ENST00000333628 MBIPQ9NS73 344 aa17.32■□□□□ 0.36
TUBB2A-201ENST00000333628 PPP1R1BQ9UD71 204 aaPredicted RBP17.32■□□□□ 0.36
TUBB2A-201ENST00000333628 KDM3BQ7LBC6 1761 aa17.31■□□□□ 0.36
TUBB2A-201ENST00000333628 IL16Q14005 1332 aa17.31■□□□□ 0.36
TUBB2A-201ENST00000333628 CNTNAP4Q9C0A0 1308 aa17.31■□□□□ 0.36
TUBB2A-201ENST00000333628 SNRPA1P09661 255 aaKnown RBP17.31■□□□□ 0.36
TUBB2A-201ENST00000333628 CRKLP46109 303 aaKnown RBP17.31■□□□□ 0.36
TUBB2A-201ENST00000333628 MSL1Q68DK7 614 aa17.31■□□□□ 0.36
TUBB2A-201ENST00000333628 FLAD1Q8NFF5 587 aa17.31■□□□□ 0.36
TUBB2A-201ENST00000333628 CCDC136Q96JN2 1154 aa17.31■□□□□ 0.36
TUBB2A-201ENST00000333628 TEX13AQ9BXU3 409 aaPredicted RBP17.31■□□□□ 0.36
TUBB2A-201ENST00000333628 C4AP0C0L4 1744 aa17.3■□□□□ 0.36
TUBB2A-201ENST00000333628 ZNF521Q96K83 1311 aa17.3■□□□□ 0.36
TUBB2A-201ENST00000333628 PRAMEF22A3QJZ6 481 aa17.3■□□□□ 0.36
TUBB2A-201ENST00000333628 CYP19A1P11511 503 aaPredicted RBP17.3■□□□□ 0.36
TUBB2A-201ENST00000333628 SSFA2P28290 1259 aa17.3■□□□□ 0.36
TUBB2A-201ENST00000333628 RC3H1Q5TC82 1133 aaKnown RBP17.3■□□□□ 0.36
TUBB2A-201ENST00000333628 USP16Q9Y5T5 823 aa17.3■□□□□ 0.36
TUBB2A-201ENST00000333628 GIGYF1O75420 1035 aaPredicted RBP17.29■□□□□ 0.36
TUBB2A-201ENST00000333628 RCAN3Q9UKA8 241 aa17.29■□□□□ 0.36
TUBB2A-201ENST00000333628 RTCBQ9Y3I0 505 aaKnown RBP17.29■□□□□ 0.36
TUBB2A-201ENST00000333628 RPS6KA4O75676 772 aa17.28■□□□□ 0.36
TUBB2A-201ENST00000333628 STARD3NLO95772 234 aa17.28■□□□□ 0.36
TUBB2A-201ENST00000333628 RRP1P56182 461 aaKnown RBP17.28■□□□□ 0.36
TUBB2A-201ENST00000333628 INTS5Q6P9B9 1019 aaKnown RBP17.28■□□□□ 0.36
TUBB2A-201ENST00000333628 TSR2Q969E8 191 aaKnown RBP17.28■□□□□ 0.36
TUBB2A-201ENST00000333628 SPINK5Q9NQ38 1064 aaPredicted RBP17.28■□□□□ 0.36
TUBB2A-201ENST00000333628 KRT24Q2M2I5 525 aa17.27■□□□□ 0.35
TUBB2A-201ENST00000333628 TRAPPC3LQ5T215 181 aa17.27■□□□□ 0.35
TUBB2A-201ENST00000333628 ARHGEF1Q92888 912 aaKnown RBP17.27■□□□□ 0.35
TUBB2A-201ENST00000333628 ARXQ96QS3 562 aa17.26■□□□□ 0.35
TUBB2A-201ENST00000333628 CCDC87Q9NVE4 849 aa17.26■□□□□ 0.35
TUBB2A-201ENST00000333628 A1BGP04217 495 aa17.25■□□□□ 0.35
TUBB2A-201ENST00000333628 GOLGA2Q08379 1002 aa17.25■□□□□ 0.35
TUBB2A-201ENST00000333628 POLD1P28340 1107 aa17.24■□□□□ 0.35
TUBB2A-201ENST00000333628 ZBTB1Q9Y2K1 713 aa17.24■□□□□ 0.35
TUBB2A-201ENST00000333628 C8orf58Q8NAV2 365 aa17.23■□□□□ 0.35
TUBB2A-201ENST00000333628 FHDC1Q9C0D6 1143 aaPredicted RBP17.23■□□□□ 0.35
TUBB2A-201ENST00000333628 ELL2O00472 640 aaPredicted RBP17.23■□□□□ 0.35
TUBB2A-201ENST00000333628 ADRA2BP18089 450 aa17.23■□□□□ 0.35
TUBB2A-201ENST00000333628 YY1P25490 414 aa17.23■□□□□ 0.35
TUBB2A-201ENST00000333628 CANXP27824 592 aaKnown RBP17.23■□□□□ 0.35
TUBB2A-201ENST00000333628 RFC4P35249 363 aa17.23■□□□□ 0.35
TUBB2A-201ENST00000333628 DUSP27Q5VZP5 1158 aa17.23■□□□□ 0.35
TUBB2A-201ENST00000333628 CDCA7LQ96GN5 454 aa17.23■□□□□ 0.35
TUBB2A-201ENST00000333628 MYH16Q9H6N6 1097 aa17.23■□□□□ 0.35
TUBB2A-201ENST00000333628 EIF2S2P20042 333 aaKnown RBP17.22■□□□□ 0.35
TUBB2A-201ENST00000333628 SRP68Q9UHB9 627 aaKnown RBP17.22■□□□□ 0.35
TUBB2A-201ENST00000333628 SOS1Q07889 1333 aaPredicted RBP17.22■□□□□ 0.35
TUBB2A-201ENST00000333628 SLFN5Q08AF3 891 aa17.21■□□□□ 0.35
TUBB2A-201ENST00000333628 KLHL34Q8N239 644 aa17.21■□□□□ 0.35
TUBB2A-201ENST00000333628 TSPYL6Q8N831 410 aa17.21■□□□□ 0.35
TUBB2A-201ENST00000333628 SYT17Q9BSW7 474 aa17.21■□□□□ 0.35
TUBB2A-201ENST00000333628 NBPF26B4DH59 902 aa17.2■□□□□ 0.34
TUBB2A-201ENST00000333628 E9PSI1 815 aa17.2■□□□□ 0.34
TUBB2A-201ENST00000333628 HOXB7P09629 217 aa17.2■□□□□ 0.34
TUBB2A-201ENST00000333628 PIP4K2AP48426 406 aaPredicted RBP17.2■□□□□ 0.34
TUBB2A-201ENST00000333628 NBPF10Q6P3W6 841 aaKnown RBP17.2■□□□□ 0.34
TUBB2A-201ENST00000333628 NBPF15Q8N660 670 aa17.2■□□□□ 0.34
TUBB2A-201ENST00000333628 LAMB4A4D0S4 1761 aa17.2■□□□□ 0.34
TUBB2A-201ENST00000333628 GYS1P13807 737 aa17.19■□□□□ 0.34
TUBB2A-201ENST00000333628 EIF5P55010 431 aaKnown RBP17.19■□□□□ 0.34
TUBB2A-201ENST00000333628 EXOSC9Q06265 439 aaKnown RBP17.19■□□□□ 0.34
TUBB2A-201ENST00000333628 NECTIN2Q92692 538 aa17.19■□□□□ 0.34
TUBB2A-201ENST00000333628 COL15A1P39059 1388 aa17.19■□□□□ 0.34
TUBB2A-201ENST00000333628 USP42Q9H9J4 1324 aaKnown RBP17.18■□□□□ 0.34
TUBB2A-201ENST00000333628 IL6STP40189 918 aaPredicted RBP17.18■□□□□ 0.34
TUBB2A-201ENST00000333628 TRMT2AQ8IZ69 625 aaKnown RBP17.18■□□□□ 0.34
TUBB2A-201ENST00000333628 MMP10P09238 476 aa17.17■□□□□ 0.34
TUBB2A-201ENST00000333628 TWISTNBQ3B726 338 aaPredicted RBP17.17■□□□□ 0.34
TUBB2A-201ENST00000333628 HDGFL1Q5TGJ6 251 aa17.17■□□□□ 0.34
TUBB2A-201ENST00000333628 ZNF330Q9Y3S2 320 aaPredicted RBP17.17■□□□□ 0.34
TUBB2A-201ENST00000333628 PDIA6Q15084 440 aa17.16■□□□□ 0.34
TUBB2A-201ENST00000333628 USPL1Q5W0Q7 1092 aa17.16■□□□□ 0.34
TUBB2A-201ENST00000333628 NLGN1Q8N2Q7 840 aa17.16■□□□□ 0.34
TUBB2A-201ENST00000333628 TCERG1O14776 1098 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms