RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 AK7Q96M32 723 aa33.72■■■□□ 2.99
SMDT1-201ENST00000331479 STARD3NLO95772 234 aa33.71■■■□□ 2.99
SMDT1-201ENST00000331479 RC3H1Q5TC82 1133 aaKnown RBP33.71■■■□□ 2.99
SMDT1-201ENST00000331479 SMIM5Q71RC9 77 aa33.71■■■□□ 2.99
SMDT1-201ENST00000331479 TUBGCP6Q96RT7 1819 aa33.7■■■□□ 2.99
SMDT1-201ENST00000331479 CDCA7LQ96GN5 454 aa33.7■■■□□ 2.99
SMDT1-201ENST00000331479 TFCP2L1Q9NZI6 479 aa33.7■■■□□ 2.99
SMDT1-201ENST00000331479 PSDA5PKW4 1024 aaPredicted RBP33.69■■■□□ 2.98
SMDT1-201ENST00000331479 GNPATO15228 680 aa33.68■■■□□ 2.98
SMDT1-201ENST00000331479 CCDC87Q9NVE4 849 aa33.68■■■□□ 2.98
SMDT1-201ENST00000331479 LAMB4A4D0S4 1761 aa33.68■■■□□ 2.98
SMDT1-201ENST00000331479 C8orf58Q8NAV2 365 aa33.68■■■□□ 2.98
SMDT1-201ENST00000331479 UBR3Q6ZT12 1888 aa33.67■■■□□ 2.98
SMDT1-201ENST00000331479 A1BGP04217 495 aa33.67■■■□□ 2.98
SMDT1-201ENST00000331479 MYH16Q9H6N6 1097 aa33.67■■■□□ 2.98
SMDT1-201ENST00000331479 ZBTB1Q9Y2K1 713 aa33.67■■■□□ 2.98
SMDT1-201ENST00000331479 ELL2O00472 640 aaPredicted RBP33.66■■■□□ 2.98
SMDT1-201ENST00000331479 SLFN5Q08AF3 891 aa33.66■■■□□ 2.98
SMDT1-201ENST00000331479 DUSP27Q5VZP5 1158 aa33.65■■■□□ 2.98
SMDT1-201ENST00000331479 E9PSI1 815 aa33.64■■■□□ 2.98
SMDT1-201ENST00000331479 TSPYL6Q8N831 410 aa33.64■■■□□ 2.98
SMDT1-201ENST00000331479 PDGFDQ9GZP0 370 aaPredicted RBP33.64■■■□□ 2.98
SMDT1-201ENST00000331479 PNPLA7Q6ZV29 1317 aa33.64■■■□□ 2.98
SMDT1-201ENST00000331479 PIP4K2AP48426 406 aaPredicted RBP33.64■■■□□ 2.98
SMDT1-201ENST00000331479 RPS6KA4O75676 772 aa33.63■■■□□ 2.97
SMDT1-201ENST00000331479 PHF14O94880 888 aa33.63■■■□□ 2.97
SMDT1-201ENST00000331479 EIF2S2P20042 333 aaKnown RBP33.63■■■□□ 2.97
SMDT1-201ENST00000331479 CANXP27824 592 aaKnown RBP33.63■■■□□ 2.97
SMDT1-201ENST00000331479 RTCBQ9Y3I0 505 aaKnown RBP33.63■■■□□ 2.97
SMDT1-201ENST00000331479 QSER1Q2KHR3 1735 aa33.62■■■□□ 2.97
SMDT1-201ENST00000331479 ZBED9Q6R2W3 1325 aa33.62■■■□□ 2.97
SMDT1-201ENST00000331479 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.61■■■□□ 2.97
SMDT1-201ENST00000331479 EXOSC9Q06265 439 aaKnown RBP33.6■■■□□ 2.97
SMDT1-201ENST00000331479 NECTIN2Q92692 538 aa33.6■■■□□ 2.97
SMDT1-201ENST00000331479 NBPF26B4DH59 902 aa33.6■■■□□ 2.97
SMDT1-201ENST00000331479 HOXB7P09629 217 aa33.6■■■□□ 2.97
SMDT1-201ENST00000331479 NBPF10Q6P3W6 841 aaKnown RBP33.6■■■□□ 2.97
SMDT1-201ENST00000331479 COL23A1Q86Y22 540 aaPredicted RBP33.6■■■□□ 2.97
SMDT1-201ENST00000331479 TRMT2AQ8IZ69 625 aaKnown RBP33.6■■■□□ 2.97
SMDT1-201ENST00000331479 NBPF15Q8N660 670 aa33.6■■■□□ 2.97
SMDT1-201ENST00000331479 SOS1Q07889 1333 aaPredicted RBP33.59■■■□□ 2.97
SMDT1-201ENST00000331479 SSFA2P28290 1259 aa33.59■■■□□ 2.97
SMDT1-201ENST00000331479 TWISTNBQ3B726 338 aaPredicted RBP33.56■■■□□ 2.96
SMDT1-201ENST00000331479 EIF5P55010 431 aaKnown RBP33.55■■■□□ 2.96
SMDT1-201ENST00000331479 HDGFL1Q5TGJ6 251 aa33.55■■■□□ 2.96
SMDT1-201ENST00000331479 CASZ1Q86V15 1759 aa33.55■■■□□ 2.96
SMDT1-201ENST00000331479 TRAPPC3LQ5T215 181 aa33.55■■■□□ 2.96
SMDT1-201ENST00000331479 ARHGEF1Q92888 912 aaKnown RBP33.55■■■□□ 2.96
SMDT1-201ENST00000331479 IL6STP40189 918 aaPredicted RBP33.54■■■□□ 2.96
SMDT1-201ENST00000331479 PDIA6Q15084 440 aa33.54■■■□□ 2.96
SMDT1-201ENST00000331479 FLAD1Q8NFF5 587 aa33.54■■■□□ 2.96
SMDT1-201ENST00000331479 ZNF330Q9Y3S2 320 aaPredicted RBP33.54■■■□□ 2.96
SMDT1-201ENST00000331479 COL15A1P39059 1388 aa33.52■■■□□ 2.96
SMDT1-201ENST00000331479 MSH5O43196 834 aa33.52■■■□□ 2.96
SMDT1-201ENST00000331479 ADRA2BP18089 450 aa33.52■■■□□ 2.96
SMDT1-201ENST00000331479 YTHDC1Q96MU7 727 aaKnown RBP33.52■■■□□ 2.96
SMDT1-201ENST00000331479 VAMP4O75379 141 aa33.51■■■□□ 2.96
SMDT1-201ENST00000331479 ANXA1P04083 346 aa33.51■■■□□ 2.96
SMDT1-201ENST00000331479 MYL6BP14649 208 aa33.51■■■□□ 2.96
SMDT1-201ENST00000331479 PROSER3Q2NL68 480 aa33.51■■■□□ 2.96
SMDT1-201ENST00000331479 C4AP0C0L4 1744 aa33.51■■■□□ 2.95
SMDT1-201ENST00000331479 CHPF2Q9P2E5 772 aa33.51■■■□□ 2.95
SMDT1-201ENST00000331479 ERBB4Q15303 1308 aa33.5■■■□□ 2.95
SMDT1-201ENST00000331479 LRP10Q7Z4F1 713 aa33.48■■■□□ 2.95
SMDT1-201ENST00000331479 RFC4P35249 363 aa33.47■■■□□ 2.95
SMDT1-201ENST00000331479 DDX21Q9NR30 783 aaKnown RBP eCLIP33.47■■■□□ 2.95
SMDT1-201ENST00000331479 SRP68Q9UHB9 627 aaKnown RBP33.47■■■□□ 2.95
SMDT1-201ENST00000331479 TCERG1O14776 1098 aaKnown RBP33.46■■■□□ 2.95
SMDT1-201ENST00000331479 ZBTB7AO95365 584 aa33.45■■■□□ 2.95
SMDT1-201ENST00000331479 CCDC30Q5VVM6 783 aa33.45■■■□□ 2.95
SMDT1-201ENST00000331479 DBF4Q9UBU7 674 aaPredicted RBP33.45■■■□□ 2.95
SMDT1-201ENST00000331479 TBC1D2BQ9UPU7 963 aa33.45■■■□□ 2.95
SMDT1-201ENST00000331479 USP42Q9H9J4 1324 aaKnown RBP33.43■■■□□ 2.94
SMDT1-201ENST00000331479 ARXQ96QS3 562 aa33.43■■■□□ 2.94
SMDT1-201ENST00000331479 A0A087WZG4 1122 aa33.43■■■□□ 2.94
SMDT1-201ENST00000331479 NPM2Q86SE8 214 aaKnown RBP33.43■■■□□ 2.94
SMDT1-201ENST00000331479 SLC16A10Q8TF71 515 aa33.42■■■□□ 2.94
SMDT1-201ENST00000331479 NARFQ9UHQ1 456 aa33.42■■■□□ 2.94
SMDT1-201ENST00000331479 DZIP3Q86Y13 1208 aaKnown RBP33.41■■■□□ 2.94
SMDT1-201ENST00000331479 USPL1Q5W0Q7 1092 aa33.4■■■□□ 2.94
SMDT1-201ENST00000331479 TTLL7Q6ZT98 887 aa33.4■■■□□ 2.94
SMDT1-201ENST00000331479 CHMP4AQ9BY43 222 aa33.4■■■□□ 2.94
SMDT1-201ENST00000331479 ZPR1O75312 459 aa33.39■■■□□ 2.94
SMDT1-201ENST00000331479 GYS1P13807 737 aa33.39■■■□□ 2.94
SMDT1-201ENST00000331479 MSL1Q68DK7 614 aa33.39■■■□□ 2.94
SMDT1-201ENST00000331479 MTFR1LQ9H019 292 aa33.38■■■□□ 2.93
SMDT1-201ENST00000331479 ATF5Q9Y2D1 282 aaPredicted RBP33.38■■■□□ 2.93
SMDT1-201ENST00000331479 SRCAPQ6ZRS2 3230 aa33.38■■■□□ 2.93
SMDT1-201ENST00000331479 CAMTA2O94983 1202 aa33.38■■■□□ 2.93
SMDT1-201ENST00000331479 COPS6Q7L5N1 327 aa33.38■■■□□ 2.93
SMDT1-201ENST00000331479 XAGE3Q8WTP9 111 aa33.38■■■□□ 2.93
SMDT1-201ENST00000331479 BCL2L12Q9HB09 334 aa33.38■■■□□ 2.93
SMDT1-201ENST00000331479 HYPKQ9NX55 129 aa33.38■■■□□ 2.93
SMDT1-201ENST00000331479 AIMP1Q12904 312 aaKnown RBP33.37■■■□□ 2.93
SMDT1-201ENST00000331479 PHAXQ9H814 394 aaKnown RBP33.37■■■□□ 2.93
SMDT1-201ENST00000331479 STK31Q9BXU1 1019 aa33.36■■■□□ 2.93
SMDT1-201ENST00000331479 SLC4A2P04920 1241 aa33.35■■■□□ 2.93
SMDT1-201ENST00000331479 FKBP8Q14318 412 aa33.35■■■□□ 2.93
SMDT1-201ENST00000331479 SCN7AQ01118 1682 aa33.35■■■□□ 2.93
SMDT1-201ENST00000331479 BCORQ6W2J9 1755 aa33.34■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms