RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 MSL1Q68DK7 614 aa19.44■□□□□ 0.7
CLRN1-203ENST00000328863 SOS1Q07889 1333 aaPredicted RBP19.44■□□□□ 0.7
CLRN1-203ENST00000328863 BCORQ6W2J9 1755 aa19.44■□□□□ 0.7
CLRN1-203ENST00000328863 KCNQ3O43525 872 aa19.43■□□□□ 0.7
CLRN1-203ENST00000328863 RFC4P35249 363 aa19.43■□□□□ 0.7
CLRN1-203ENST00000328863 INTS5Q6P9B9 1019 aaKnown RBP19.43■□□□□ 0.7
CLRN1-203ENST00000328863 ARXQ96QS3 562 aa19.43■□□□□ 0.7
CLRN1-203ENST00000328863 TSPYL4Q9UJ04 414 aa19.43■□□□□ 0.7
CLRN1-203ENST00000328863 ZBTB1Q9Y2K1 713 aa19.43■□□□□ 0.7
CLRN1-203ENST00000328863 SNRPA1P09661 255 aaKnown RBP19.42■□□□□ 0.7
CLRN1-203ENST00000328863 BABAM1Q9NWV8 329 aa19.42■□□□□ 0.7
CLRN1-203ENST00000328863 APAF1O14727 1248 aa19.41■□□□□ 0.7
CLRN1-203ENST00000328863 SMIM5Q71RC9 77 aa19.41■□□□□ 0.7
CLRN1-203ENST00000328863 USP42Q9H9J4 1324 aaKnown RBP19.41■□□□□ 0.7
CLRN1-203ENST00000328863 CALD1Q05682 793 aaKnown RBP19.4■□□□□ 0.7
CLRN1-203ENST00000328863 NPM2Q86SE8 214 aaKnown RBP19.4■□□□□ 0.7
CLRN1-203ENST00000328863 ARHGEF1Q92888 912 aaKnown RBP19.4■□□□□ 0.7
CLRN1-203ENST00000328863 TRIM35Q9UPQ4 493 aa19.4■□□□□ 0.7
CLRN1-203ENST00000328863 MIS18AQ9NYP9 233 aa19.39■□□□□ 0.69
CLRN1-203ENST00000328863 CANXP27824 592 aaKnown RBP19.38■□□□□ 0.69
CLRN1-203ENST00000328863 A0A087WZG4 1122 aa19.37■□□□□ 0.69
CLRN1-203ENST00000328863 ZPR1O75312 459 aa19.37■□□□□ 0.69
CLRN1-203ENST00000328863 IL6STP40189 918 aaPredicted RBP19.37■□□□□ 0.69
CLRN1-203ENST00000328863 EIF4A1P60842 406 aaKnown RBP19.37■□□□□ 0.69
CLRN1-203ENST00000328863 KLHL34Q8N239 644 aa19.37■□□□□ 0.69
CLRN1-203ENST00000328863 NLGN1Q8N2Q7 840 aa19.37■□□□□ 0.69
CLRN1-203ENST00000328863 FHDC1Q9C0D6 1143 aaPredicted RBP19.37■□□□□ 0.69
CLRN1-203ENST00000328863 KIF13BQ9NQT8 1826 aa19.37■□□□□ 0.69
CLRN1-203ENST00000328863 ZNF330Q9Y3S2 320 aaPredicted RBP19.36■□□□□ 0.69
CLRN1-203ENST00000328863 GYS1P13807 737 aa19.35■□□□□ 0.69
CLRN1-203ENST00000328863 PRAMEF22A3QJZ6 481 aa19.34■□□□□ 0.69
CLRN1-203ENST00000328863 GIGYF1O75420 1035 aaPredicted RBP19.34■□□□□ 0.69
CLRN1-203ENST00000328863 EIF5P55010 431 aaKnown RBP19.34■□□□□ 0.69
CLRN1-203ENST00000328863 SRP68Q9UHB9 627 aaKnown RBP19.34■□□□□ 0.69
CLRN1-203ENST00000328863 NARFQ9UHQ1 456 aa19.34■□□□□ 0.69
CLRN1-203ENST00000328863 LAS1LQ9Y4W2 734 aaKnown RBP19.34■□□□□ 0.69
CLRN1-203ENST00000328863 MMP10P09238 476 aa19.33■□□□□ 0.68
CLRN1-203ENST00000328863 FAM9BQ8IZU0 186 aa19.33■□□□□ 0.68
CLRN1-203ENST00000328863 CFAP44Q96MT7 982 aa19.33■□□□□ 0.68
CLRN1-203ENST00000328863 USP16Q9Y5T5 823 aa19.33■□□□□ 0.68
CLRN1-203ENST00000328863 ERBB4Q15303 1308 aa19.32■□□□□ 0.68
CLRN1-203ENST00000328863 A1BGP04217 495 aa19.32■□□□□ 0.68
CLRN1-203ENST00000328863 CCDC27Q2M243 656 aa19.32■□□□□ 0.68
CLRN1-203ENST00000328863 NCBP3Q53F19 620 aaKnown RBP19.32■□□□□ 0.68
CLRN1-203ENST00000328863 USPL1Q5W0Q7 1092 aa19.32■□□□□ 0.68
CLRN1-203ENST00000328863 IFT57Q9NWB7 429 aa19.32■□□□□ 0.68
CLRN1-203ENST00000328863 C10orf71Q711Q0 1435 aa19.32■□□□□ 0.68
CLRN1-203ENST00000328863 NRXN2Q9P2S2 1712 aa19.31■□□□□ 0.68
CLRN1-203ENST00000328863 AFDNP55196 1824 aaKnown RBP19.31■□□□□ 0.68
CLRN1-203ENST00000328863 CCER2I3L3R5 266 aa19.31■□□□□ 0.68
CLRN1-203ENST00000328863 CHL1O00533 1208 aa19.31■□□□□ 0.68
CLRN1-203ENST00000328863 GNAI1P63096 354 aa19.31■□□□□ 0.68
CLRN1-203ENST00000328863 SYT17Q9BSW7 474 aa19.31■□□□□ 0.68
CLRN1-203ENST00000328863 PARP3Q9Y6F1 533 aa19.3■□□□□ 0.68
CLRN1-203ENST00000328863 DCAF8L1A6NGE4 600 aa19.29■□□□□ 0.68
CLRN1-203ENST00000328863 FKBP8Q14318 412 aa19.29■□□□□ 0.68
CLRN1-203ENST00000328863 DZIP3Q86Y13 1208 aaKnown RBP19.29■□□□□ 0.68
CLRN1-203ENST00000328863 KIAA1551Q9HCM1 1747 aa19.28■□□□□ 0.68
CLRN1-203ENST00000328863 PIP4K2AP48426 406 aaPredicted RBP19.28■□□□□ 0.68
CLRN1-203ENST00000328863 DIEXFQ68CQ4 756 aaKnown RBP19.28■□□□□ 0.68
CLRN1-203ENST00000328863 MBIPQ9NS73 344 aa19.28■□□□□ 0.68
CLRN1-203ENST00000328863 CD2APQ9Y5K6 639 aa19.28■□□□□ 0.68
CLRN1-203ENST00000328863 HOXB7P09629 217 aa19.27■□□□□ 0.68
CLRN1-203ENST00000328863 NGEFQ8N5V2 710 aa19.27■□□□□ 0.68
CLRN1-203ENST00000328863 ZNF652Q9Y2D9 606 aa19.27■□□□□ 0.68
CLRN1-203ENST00000328863 NBPF26B4DH59 902 aa19.26■□□□□ 0.67
CLRN1-203ENST00000328863 NBPF10Q6P3W6 841 aaKnown RBP19.26■□□□□ 0.67
CLRN1-203ENST00000328863 WWC1Q8IX03 1113 aa19.26■□□□□ 0.67
CLRN1-203ENST00000328863 NBPF15Q8N660 670 aa19.26■□□□□ 0.67
CLRN1-203ENST00000328863 TBC1D2BQ9UPU7 963 aa19.26■□□□□ 0.67
CLRN1-203ENST00000328863 ANKRD36CQ5JPF3 1778 aa19.26■□□□□ 0.67
CLRN1-203ENST00000328863 NUP98P52948 1817 aa19.25■□□□□ 0.67
CLRN1-203ENST00000328863 CARMIL3Q8ND23 1372 aa19.25■□□□□ 0.67
CLRN1-203ENST00000328863 ZNF853P0CG23 659 aa19.25■□□□□ 0.67
CLRN1-203ENST00000328863 IL16Q14005 1332 aa19.25■□□□□ 0.67
CLRN1-203ENST00000328863 BRCA1P38398 1863 aaKnown RBP19.24■□□□□ 0.67
CLRN1-203ENST00000328863 N4BP2Q86UW6 1770 aaPredicted RBP19.24■□□□□ 0.67
CLRN1-203ENST00000328863 RGL2O15211 777 aa19.24■□□□□ 0.67
CLRN1-203ENST00000328863 CAMTA2O94983 1202 aa19.24■□□□□ 0.67
CLRN1-203ENST00000328863 EIF2S2P20042 333 aaKnown RBP19.24■□□□□ 0.67
CLRN1-203ENST00000328863 DDR1Q08345 913 aa19.24■□□□□ 0.67
CLRN1-203ENST00000328863 KIF6Q6ZMV9 814 aa19.24■□□□□ 0.67
CLRN1-203ENST00000328863 NLGN2Q8NFZ4 835 aa19.24■□□□□ 0.67
CLRN1-203ENST00000328863 BCL2L12Q9HB09 334 aa19.24■□□□□ 0.67
CLRN1-203ENST00000328863 DLEC1Q9Y238 1755 aa19.24■□□□□ 0.67
CLRN1-203ENST00000328863 PXDNLA1KZ92 1463 aa19.23■□□□□ 0.67
CLRN1-203ENST00000328863 SENP3-EIF4A1A0A087X0R7 540 aa19.23■□□□□ 0.67
CLRN1-203ENST00000328863 POLRMTO00411 1230 aaKnown RBP19.23■□□□□ 0.67
CLRN1-203ENST00000328863 MYL6BP14649 208 aa19.23■□□□□ 0.67
CLRN1-203ENST00000328863 NFIXQ14938 502 aa19.23■□□□□ 0.67
CLRN1-203ENST00000328863 HDGFL1Q5TGJ6 251 aa19.23■□□□□ 0.67
CLRN1-203ENST00000328863 KRT24Q2M2I5 525 aa19.22■□□□□ 0.67
CLRN1-203ENST00000328863 TM4SF1P30408 202 aa19.21■□□□□ 0.67
CLRN1-203ENST00000328863 CLEC4GQ6UXB4 293 aa19.21■□□□□ 0.67
CLRN1-203ENST00000328863 SALL2Q9Y467 1007 aaPredicted RBP19.21■□□□□ 0.67
CLRN1-203ENST00000328863 ATP10DQ9P241 1426 aa19.2■□□□□ 0.66
CLRN1-203ENST00000328863 DUSP27Q5VZP5 1158 aa19.2■□□□□ 0.66
CLRN1-203ENST00000328863 TBC1D9BQ66K14 1250 aa19.2■□□□□ 0.66
CLRN1-203ENST00000328863 BICDL1Q6ZP65 573 aa19.2■□□□□ 0.66
CLRN1-203ENST00000328863 WDR63Q8IWG1 891 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms