RNA–Protein interactions for RNA: ENST00000328221.5

IFITM1-201, Transcript of interferon induced transmembrane protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene IFITM1, Length 844 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM1-201ENST00000328221 BTBD11A6QL63 1104 aa17.59■□□□□ 0.41
IFITM1-201ENST00000328221 STARD3NLO95772 234 aa17.59■□□□□ 0.41
IFITM1-201ENST00000328221 RFC4P35249 363 aa17.59■□□□□ 0.41
IFITM1-201ENST00000328221 SLC39A6Q13433 755 aa17.59■□□□□ 0.41
IFITM1-201ENST00000328221 PNISRQ8TF01 805 aaKnown RBP17.59■□□□□ 0.41
IFITM1-201ENST00000328221 ZNF526Q8TF50 670 aaPredicted RBP17.59■□□□□ 0.41
IFITM1-201ENST00000328221 GOLGB1Q14789 3259 aaKnown RBP17.59■□□□□ 0.41
IFITM1-201ENST00000328221 NLGN1Q8N2Q7 840 aa17.58■□□□□ 0.4
IFITM1-201ENST00000328221 COL15A1P39059 1388 aa17.57■□□□□ 0.4
IFITM1-201ENST00000328221 CYP19A1P11511 503 aaPredicted RBP17.57■□□□□ 0.4
IFITM1-201ENST00000328221 AMIGO3Q86WK7 504 aa17.57■□□□□ 0.4
IFITM1-201ENST00000328221 DNAJC10Q8IXB1 793 aa17.57■□□□□ 0.4
IFITM1-201ENST00000328221 SOS1Q07889 1333 aaPredicted RBP17.56■□□□□ 0.4
IFITM1-201ENST00000328221 MCM10Q7L590 875 aa17.56■□□□□ 0.4
IFITM1-201ENST00000328221 WWC3Q9ULE0 1092 aa17.56■□□□□ 0.4
IFITM1-201ENST00000328221 BCORQ6W2J9 1755 aa17.56■□□□□ 0.4
IFITM1-201ENST00000328221 USP42Q9H9J4 1324 aaKnown RBP17.55■□□□□ 0.4
IFITM1-201ENST00000328221 ARHGEF1Q92888 912 aaKnown RBP17.55■□□□□ 0.4
IFITM1-201ENST00000328221 ZNF496Q96IT1 587 aaPredicted RBP17.55■□□□□ 0.4
IFITM1-201ENST00000328221 A0A087WZG4 1122 aa17.54■□□□□ 0.4
IFITM1-201ENST00000328221 TAF7Q15545 349 aaPredicted RBP17.54■□□□□ 0.4
IFITM1-201ENST00000328221 INTS5Q6P9B9 1019 aaKnown RBP17.54■□□□□ 0.4
IFITM1-201ENST00000328221 NPM2Q86SE8 214 aaKnown RBP17.54■□□□□ 0.4
IFITM1-201ENST00000328221 ZPR1O75312 459 aa17.53■□□□□ 0.4
IFITM1-201ENST00000328221 MMP10P09238 476 aa17.53■□□□□ 0.4
IFITM1-201ENST00000328221 RUNDC1Q96C34 613 aa17.53■□□□□ 0.4
IFITM1-201ENST00000328221 GYS1P13807 737 aa17.52■□□□□ 0.4
IFITM1-201ENST00000328221 ZBTB1Q9Y2K1 713 aa17.52■□□□□ 0.4
IFITM1-201ENST00000328221 SNRPA1P09661 255 aaKnown RBP17.51■□□□□ 0.39
IFITM1-201ENST00000328221 C10orf71Q711Q0 1435 aa17.51■□□□□ 0.39
IFITM1-201ENST00000328221 SMIM5Q71RC9 77 aa17.51■□□□□ 0.39
IFITM1-201ENST00000328221 BABAM1Q9NWV8 329 aa17.51■□□□□ 0.39
IFITM1-201ENST00000328221 NRXN2Q9P2S2 1712 aa17.5■□□□□ 0.39
IFITM1-201ENST00000328221 ANP32CO43423 234 aa17.5■□□□□ 0.39
IFITM1-201ENST00000328221 IL6STP40189 918 aaPredicted RBP17.5■□□□□ 0.39
IFITM1-201ENST00000328221 TGFB2P61812 414 aa17.5■□□□□ 0.39
IFITM1-201ENST00000328221 DCTN1Q14203 1278 aa17.5■□□□□ 0.39
IFITM1-201ENST00000328221 PARP3Q9Y6F1 533 aa17.5■□□□□ 0.39
IFITM1-201ENST00000328221 HSPA6P17066 643 aa17.49■□□□□ 0.39
IFITM1-201ENST00000328221 TMPOP42166 694 aaKnown RBP17.49■□□□□ 0.39
IFITM1-201ENST00000328221 RIPK4P57078 832 aa17.49■□□□□ 0.39
IFITM1-201ENST00000328221 NARFQ9UHQ1 456 aa17.49■□□□□ 0.39
IFITM1-201ENST00000328221 BCS1LQ9Y276 419 aa17.49■□□□□ 0.39
IFITM1-201ENST00000328221 KIAA1551Q9HCM1 1747 aa17.49■□□□□ 0.39
IFITM1-201ENST00000328221 AFDNP55196 1824 aaKnown RBP17.49■□□□□ 0.39
IFITM1-201ENST00000328221 ADCY9O60503 1353 aa17.48■□□□□ 0.39
IFITM1-201ENST00000328221 BRCA1P38398 1863 aaKnown RBP17.48■□□□□ 0.39
IFITM1-201ENST00000328221 CANXP27824 592 aaKnown RBP17.47■□□□□ 0.39
IFITM1-201ENST00000328221 EIF5P55010 431 aaKnown RBP17.47■□□□□ 0.39
IFITM1-201ENST00000328221 RGL2O15211 777 aa17.46■□□□□ 0.39
IFITM1-201ENST00000328221 ARHGAP27Q6ZUM4 889 aa17.46■□□□□ 0.39
IFITM1-201ENST00000328221 DLEC1Q9Y238 1755 aa17.45■□□□□ 0.38
IFITM1-201ENST00000328221 CALD1Q05682 793 aaKnown RBP17.45■□□□□ 0.38
IFITM1-201ENST00000328221 SRP68Q9UHB9 627 aaKnown RBP17.45■□□□□ 0.38
IFITM1-201ENST00000328221 ADAMTS8Q9UP79 889 aa17.45■□□□□ 0.38
IFITM1-201ENST00000328221 N4BP2Q86UW6 1770 aaPredicted RBP17.45■□□□□ 0.38
IFITM1-201ENST00000328221 ARFGEF1Q9Y6D6 1849 aa17.44■□□□□ 0.38
IFITM1-201ENST00000328221 A0A0G2JLW4 131 aa17.44■□□□□ 0.38
IFITM1-201ENST00000328221 KCNQ3O43525 872 aa17.44■□□□□ 0.38
IFITM1-201ENST00000328221 IFFO2Q5TF58 517 aa17.44■□□□□ 0.38
IFITM1-201ENST00000328221 USPL1Q5W0Q7 1092 aa17.44■□□□□ 0.38
IFITM1-201ENST00000328221 CCDC146Q8IYE0 955 aa17.44■□□□□ 0.38
IFITM1-201ENST00000328221 C16orf71Q8IYS4 520 aaPredicted RBP17.44■□□□□ 0.38
IFITM1-201ENST00000328221 TSPYL4Q9UJ04 414 aa17.44■□□□□ 0.38
IFITM1-201ENST00000328221 ERBB4Q15303 1308 aa17.44■□□□□ 0.38
IFITM1-201ENST00000328221 PXDNLA1KZ92 1463 aa17.44■□□□□ 0.38
IFITM1-201ENST00000328221 FKBP8Q14318 412 aa17.43■□□□□ 0.38
IFITM1-201ENST00000328221 ZNF652Q9Y2D9 606 aa17.43■□□□□ 0.38
IFITM1-201ENST00000328221 CARMIL3Q8ND23 1372 aa17.42■□□□□ 0.38
IFITM1-201ENST00000328221 EIF4A1P60842 406 aaKnown RBP17.42■□□□□ 0.38
IFITM1-201ENST00000328221 ZNF330Q9Y3S2 320 aaPredicted RBP17.42■□□□□ 0.38
IFITM1-201ENST00000328221 THUMPD2Q9BTF0 503 aaKnown RBP17.41■□□□□ 0.38
IFITM1-201ENST00000328221 USP16Q9Y5T5 823 aa17.41■□□□□ 0.38
IFITM1-201ENST00000328221 CEP350Q5VT06 3117 aa17.4■□□□□ 0.38
IFITM1-201ENST00000328221 POLRMTO00411 1230 aaKnown RBP17.4■□□□□ 0.38
IFITM1-201ENST00000328221 A1BGP04217 495 aa17.4■□□□□ 0.38
IFITM1-201ENST00000328221 TM4SF1P30408 202 aa17.4■□□□□ 0.38
IFITM1-201ENST00000328221 APLP1P51693 650 aa17.4■□□□□ 0.38
IFITM1-201ENST00000328221 DZIP3Q86Y13 1208 aaKnown RBP17.4■□□□□ 0.38
IFITM1-201ENST00000328221 PIM2Q9P1W9 311 aa17.4■□□□□ 0.38
IFITM1-201ENST00000328221 TOMM70O94826 608 aa17.39■□□□□ 0.37
IFITM1-201ENST00000328221 DPEP1P16444 411 aa17.39■□□□□ 0.37
IFITM1-201ENST00000328221 DDR1Q08345 913 aa17.39■□□□□ 0.37
IFITM1-201ENST00000328221 NEUROD2Q15784 382 aa17.39■□□□□ 0.37
IFITM1-201ENST00000328221 CLEC4GQ6UXB4 293 aa17.39■□□□□ 0.37
IFITM1-201ENST00000328221 MRS2Q9HD23 443 aa17.39■□□□□ 0.37
IFITM1-201ENST00000328221 RRP7AQ9Y3A4 280 aaKnown RBP17.39■□□□□ 0.37
IFITM1-201ENST00000328221 NUP98P52948 1817 aa17.38■□□□□ 0.37
IFITM1-201ENST00000328221 NFIXQ14938 502 aa17.38■□□□□ 0.37
IFITM1-201ENST00000328221 DALRD3Q5D0E6 543 aaKnown RBP17.38■□□□□ 0.37
IFITM1-201ENST00000328221 MIS18AQ9NYP9 233 aa17.38■□□□□ 0.37
IFITM1-201ENST00000328221 PDZRN3Q9UPQ7 1066 aa17.38■□□□□ 0.37
IFITM1-201ENST00000328221 KIF3CO14782 793 aa17.37■□□□□ 0.37
IFITM1-201ENST00000328221 HOXB7P09629 217 aa17.37■□□□□ 0.37
IFITM1-201ENST00000328221 NCBP3Q53F19 620 aaKnown RBP17.37■□□□□ 0.37
IFITM1-201ENST00000328221 BCL2L12Q9HB09 334 aa17.37■□□□□ 0.37
IFITM1-201ENST00000328221 TRIM35Q9UPQ4 493 aa17.37■□□□□ 0.37
IFITM1-201ENST00000328221 KDM2BQ8NHM5 1336 aa17.37■□□□□ 0.37
IFITM1-201ENST00000328221 ANKRD36CQ5JPF3 1778 aa17.37■□□□□ 0.37
IFITM1-201ENST00000328221 ANKRD31Q8N7Z5 1873 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms