RNA–Protein interactions for RNA: ENST00000326674.9

PTPMT1-202, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPMT1, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-202ENST00000326674 CANXP27824 592 aaKnown RBP26.53■■□□□ 1.84
PTPMT1-202ENST00000326674 SOS1Q07889 1333 aaPredicted RBP26.53■■□□□ 1.84
PTPMT1-202ENST00000326674 COL15A1P39059 1388 aa26.53■■□□□ 1.84
PTPMT1-202ENST00000326674 HTATSF1O43719 755 aaKnown RBP26.52■■□□□ 1.84
PTPMT1-202ENST00000326674 TEX13AQ9BXU3 409 aaPredicted RBP26.52■■□□□ 1.84
PTPMT1-202ENST00000326674 N4BP2Q86UW6 1770 aaPredicted RBP26.51■■□□□ 1.83
PTPMT1-202ENST00000326674 USPL1Q5W0Q7 1092 aa26.49■■□□□ 1.83
PTPMT1-202ENST00000326674 WWC3Q9ULE0 1092 aa26.49■■□□□ 1.83
PTPMT1-202ENST00000326674 ZNF330Q9Y3S2 320 aaPredicted RBP26.49■■□□□ 1.83
PTPMT1-202ENST00000326674 KCNQ3O43525 872 aa26.48■■□□□ 1.83
PTPMT1-202ENST00000326674 GRIN3BO60391 1043 aa26.48■■□□□ 1.83
PTPMT1-202ENST00000326674 YBX3P16989 372 aaKnown RBP eCLIP26.48■■□□□ 1.833e-6■■□□□ 12.9
PTPMT1-202ENST00000326674 FKBP8Q14318 412 aa26.48■■□□□ 1.83
PTPMT1-202ENST00000326674 NFE2L2Q16236 605 aa26.48■■□□□ 1.83
PTPMT1-202ENST00000326674 PLEKHF1Q96S99 279 aa26.48■■□□□ 1.83
PTPMT1-202ENST00000326674 NPM2Q86SE8 214 aaKnown RBP26.47■■□□□ 1.83
PTPMT1-202ENST00000326674 C10orf71Q711Q0 1435 aa26.46■■□□□ 1.83
PTPMT1-202ENST00000326674 KIAA1551Q9HCM1 1747 aa26.45■■□□□ 1.83
PTPMT1-202ENST00000326674 TAF7Q15545 349 aaPredicted RBP26.45■■□□□ 1.82
PTPMT1-202ENST00000326674 NARFQ9UHQ1 456 aa26.45■■□□□ 1.82
PTPMT1-202ENST00000326674 A0A087WZG4 1122 aa26.44■■□□□ 1.82
PTPMT1-202ENST00000326674 WDR43Q15061 677 aaKnown RBP eCLIP26.44■■□□□ 1.82
PTPMT1-202ENST00000326674 KDM3BQ7LBC6 1761 aa26.43■■□□□ 1.82
PTPMT1-202ENST00000326674 AFDNP55196 1824 aaKnown RBP26.43■■□□□ 1.82
PTPMT1-202ENST00000326674 SCN7AQ01118 1682 aa26.43■■□□□ 1.82
PTPMT1-202ENST00000326674 LAMB4A4D0S4 1761 aa26.43■■□□□ 1.82
PTPMT1-202ENST00000326674 PXDNLA1KZ92 1463 aa26.42■■□□□ 1.82
PTPMT1-202ENST00000326674 SNRPA1P09661 255 aaKnown RBP26.41■■□□□ 1.82
PTPMT1-202ENST00000326674 TGFB2P61812 414 aa26.41■■□□□ 1.82
PTPMT1-202ENST00000326674 DDR1Q08345 913 aa26.41■■□□□ 1.82
PTPMT1-202ENST00000326674 A1BGP04217 495 aa26.4■■□□□ 1.82
PTPMT1-202ENST00000326674 EIF5P55010 431 aaKnown RBP26.4■■□□□ 1.82
PTPMT1-202ENST00000326674 PNISRQ8TF01 805 aaKnown RBP26.4■■□□□ 1.82
PTPMT1-202ENST00000326674 PRKRIP1Q9H875 184 aaPredicted RBP26.4■■□□□ 1.82
PTPMT1-202ENST00000326674 MIS18AQ9NYP9 233 aa26.4■■□□□ 1.82
PTPMT1-202ENST00000326674 IL6STP40189 918 aaPredicted RBP26.39■■□□□ 1.82
PTPMT1-202ENST00000326674 THUMPD2Q9BTF0 503 aaKnown RBP26.39■■□□□ 1.82
PTPMT1-202ENST00000326674 A0A0G2JLW4 131 aa26.38■■□□□ 1.81
PTPMT1-202ENST00000326674 POLRMTO00411 1230 aaKnown RBP26.38■■□□□ 1.81
PTPMT1-202ENST00000326674 USP16Q9Y5T5 823 aa26.38■■□□□ 1.81
PTPMT1-202ENST00000326674 BRCA1P38398 1863 aaKnown RBP26.38■■□□□ 1.81
PTPMT1-202ENST00000326674 BCORQ6W2J9 1755 aa26.38■■□□□ 1.81
PTPMT1-202ENST00000326674 PRAMEF22A3QJZ6 481 aa26.37■■□□□ 1.81
PTPMT1-202ENST00000326674 TM4SF1P30408 202 aa26.37■■□□□ 1.81
PTPMT1-202ENST00000326674 RIPK4P57078 832 aa26.37■■□□□ 1.81
PTPMT1-202ENST00000326674 CCDC146Q8IYE0 955 aa26.37■■□□□ 1.81
PTPMT1-202ENST00000326674 TBC1D2BQ9UPU7 963 aa26.37■■□□□ 1.81
PTPMT1-202ENST00000326674 NFIXQ14938 502 aa26.36■■□□□ 1.81
PTPMT1-202ENST00000326674 BICDL1Q6ZP65 573 aa26.36■■□□□ 1.81
PTPMT1-202ENST00000326674 DPEP1P16444 411 aa26.35■■□□□ 1.81
PTPMT1-202ENST00000326674 PIP4K2AP48426 406 aaPredicted RBP26.35■■□□□ 1.81
PTPMT1-202ENST00000326674 ZNF784Q8NCA9 323 aaPredicted RBP26.35■■□□□ 1.81
PTPMT1-202ENST00000326674 BCL2L12Q9HB09 334 aa26.35■■□□□ 1.81
PTPMT1-202ENST00000326674 NRXN2Q9P2S2 1712 aa26.35■■□□□ 1.81
PTPMT1-202ENST00000326674 BCS1LQ9Y276 419 aa26.35■■□□□ 1.81
PTPMT1-202ENST00000326674 LMOD3Q0VAK6 560 aa26.34■■□□□ 1.81
PTPMT1-202ENST00000326674 TMPOP42166 694 aaKnown RBP26.33■■□□□ 1.81
PTPMT1-202ENST00000326674 SERPINB2P05120 415 aa26.32■■□□□ 1.8
PTPMT1-202ENST00000326674 NEUROD2Q15784 382 aa26.32■■□□□ 1.8
PTPMT1-202ENST00000326674 DZIP3Q86Y13 1208 aaKnown RBP26.32■■□□□ 1.8
PTPMT1-202ENST00000326674 RRP7AQ9Y3A4 280 aaKnown RBP26.32■■□□□ 1.8
PTPMT1-202ENST00000326674 ARFGEF1Q9Y6D6 1849 aa26.31■■□□□ 1.8
PTPMT1-202ENST00000326674 RUNDC1Q96C34 613 aa26.31■■□□□ 1.8
PTPMT1-202ENST00000326674 GOLGB1Q14789 3259 aaKnown RBP26.3■■□□□ 1.8
PTPMT1-202ENST00000326674 TBC1D9BQ66K14 1250 aa26.3■■□□□ 1.8
PTPMT1-202ENST00000326674 TSPYL4Q9UJ04 414 aa26.3■■□□□ 1.8
PTPMT1-202ENST00000326674 UTRNP46939 3433 aa26.29■■□□□ 1.8
PTPMT1-202ENST00000326674 ZNF316A6NFI3 1004 aaPredicted RBP26.28■■□□□ 1.8
PTPMT1-202ENST00000326674 NPHP1O15259 732 aa26.28■■□□□ 1.8
PTPMT1-202ENST00000326674 PIM2Q9P1W9 311 aa26.28■■□□□ 1.8
PTPMT1-202ENST00000326674 ADAMTS8Q9UP79 889 aa26.28■■□□□ 1.8
PTPMT1-202ENST00000326674 CAMTA2O94983 1202 aa26.27■■□□□ 1.8
PTPMT1-202ENST00000326674 CHRNA5P30532 468 aa26.27■■□□□ 1.8
PTPMT1-202ENST00000326674 EIF4A1P60842 406 aaKnown RBP26.27■■□□□ 1.8
PTPMT1-202ENST00000326674 CARMIL3Q8ND23 1372 aa26.27■■□□□ 1.8
PTPMT1-202ENST00000326674 DLEC1Q9Y238 1755 aa26.27■■□□□ 1.8
PTPMT1-202ENST00000326674 GIGYF1O75420 1035 aaPredicted RBP26.25■■□□□ 1.79
PTPMT1-202ENST00000326674 SETDB2Q96T68 719 aa26.25■■□□□ 1.79
PTPMT1-202ENST00000326674 ZNF652Q9Y2D9 606 aa26.25■■□□□ 1.79
PTPMT1-202ENST00000326674 ANKRD31Q8N7Z5 1873 aa26.24■■□□□ 1.79
PTPMT1-202ENST00000326674 KCNA3P22001 575 aa26.24■■□□□ 1.79
PTPMT1-202ENST00000326674 DALRD3Q5D0E6 543 aaKnown RBP26.24■■□□□ 1.79
PTPMT1-202ENST00000326674 NBPF26B4DH59 902 aa26.23■■□□□ 1.79
PTPMT1-202ENST00000326674 NBPF10Q6P3W6 841 aaKnown RBP26.23■■□□□ 1.79
PTPMT1-202ENST00000326674 ARHGAP27Q6ZUM4 889 aa26.23■■□□□ 1.79
PTPMT1-202ENST00000326674 NGEFQ8N5V2 710 aa26.23■■□□□ 1.79
PTPMT1-202ENST00000326674 NBPF15Q8N660 670 aa26.23■■□□□ 1.79
PTPMT1-202ENST00000326674 LAS1LQ9Y4W2 734 aaKnown RBP26.22■■□□□ 1.79
PTPMT1-202ENST00000326674 MYL6BP14649 208 aa26.2■■□□□ 1.78
PTPMT1-202ENST00000326674 C2CD5Q86YS7 1000 aa26.2■■□□□ 1.78
PTPMT1-202ENST00000326674 CNBD1Q8NA66 436 aa26.2■■□□□ 1.78
PTPMT1-202ENST00000326674 BABAM1Q9NWV8 329 aa26.2■■□□□ 1.78
PTPMT1-202ENST00000326674 ATP10DQ9P241 1426 aa26.2■■□□□ 1.78
PTPMT1-202ENST00000326674 CACNA1SQ13698 1873 aa26.19■■□□□ 1.78
PTPMT1-202ENST00000326674 NUP98P52948 1817 aa26.19■■□□□ 1.78
PTPMT1-202ENST00000326674 CLEC4GQ6UXB4 293 aa26.19■■□□□ 1.78
PTPMT1-202ENST00000326674 CCDC24Q8N4L8 307 aa26.19■■□□□ 1.78
PTPMT1-202ENST00000326674 H0YIN7 160 aa26.18■■□□□ 1.78
PTPMT1-202ENST00000326674 ST5P78524 1137 aa26.18■■□□□ 1.78
PTPMT1-202ENST00000326674 PRR5LQ6MZQ0 368 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms