RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 DHX37Q8IY37 1157 aaKnown RBP24.38■■□□□ 1.49
RNF40-201ENST00000324685 NUDT16Q96DE0 195 aaKnown RBP24.38■■□□□ 1.49
RNF40-201ENST00000324685 FAM107BQ9H098 131 aa24.38■■□□□ 1.49
RNF40-201ENST00000324685 MINDY4BA8MYZ0 360 aa24.38■■□□□ 1.49
RNF40-201ENST00000324685 SMC1AQ14683 1233 aaKnown RBP24.38■■□□□ 1.49
RNF40-201ENST00000324685 CCDC85AQ96PX6 553 aaPredicted RBP24.38■■□□□ 1.49
RNF40-201ENST00000324685 GOLGA6L10A0A0M3HER8 536 aa24.37■■□□□ 1.49
RNF40-201ENST00000324685 ANAPC15P60006 121 aa24.37■■□□□ 1.49
RNF40-201ENST00000324685 CNNM3Q8NE01 707 aa24.37■■□□□ 1.49
RNF40-201ENST00000324685 CCDC184Q52MB2 194 aa24.37■■□□□ 1.49
RNF40-201ENST00000324685 PPP1R1BQ9UD71 204 aaPredicted RBP24.37■■□□□ 1.49
RNF40-201ENST00000324685 TNNT1P13805 278 aa24.37■■□□□ 1.49
RNF40-201ENST00000324685 MYD88Q99836 296 aa24.36■■□□□ 1.49
RNF40-201ENST00000324685 TIAM1Q13009 1591 aa24.36■■□□□ 1.49
RNF40-201ENST00000324685 TAF7Q15545 349 aaPredicted RBP24.36■■□□□ 1.49
RNF40-201ENST00000324685 STX1AQ16623 288 aa24.36■■□□□ 1.49
RNF40-201ENST00000324685 MCM10Q7L590 875 aa24.36■■□□□ 1.49
RNF40-201ENST00000324685 IQCA1Q86XH1 822 aa24.36■■□□□ 1.49
RNF40-201ENST00000324685 CCDC141Q6ZP82 1450 aa24.36■■□□□ 1.49
RNF40-201ENST00000324685 ZNF213O14771 459 aa24.36■■□□□ 1.49
RNF40-201ENST00000324685 SSH1Q8WYL5 1049 aa24.36■■□□□ 1.49
RNF40-201ENST00000324685 BICDL1Q6ZP65 573 aa24.36■■□□□ 1.49
RNF40-201ENST00000324685 GOLGA6L9A6NEM1 432 aa24.35■■□□□ 1.49
RNF40-201ENST00000324685 ALS2CR12Q96Q35 445 aa24.35■■□□□ 1.49
RNF40-201ENST00000324685 MCM5P33992 734 aa24.35■■□□□ 1.49
RNF40-201ENST00000324685 NAA15Q9BXJ9 866 aaKnown RBP24.35■■□□□ 1.49
RNF40-201ENST00000324685 WDR97A6NE52 1622 aa24.35■■□□□ 1.49
RNF40-201ENST00000324685 STAMBPO95630 424 aa24.35■■□□□ 1.49
RNF40-201ENST00000324685 SSFA2P28290 1259 aa24.35■■□□□ 1.49
RNF40-201ENST00000324685 AMOTQ4VCS5 1084 aa24.35■■□□□ 1.49
RNF40-201ENST00000324685 CCDC61Q9Y6R9 512 aa24.35■■□□□ 1.49
RNF40-201ENST00000324685 CRACR2BQ8N4Y2 399 aaPredicted RBP24.34■■□□□ 1.49
RNF40-201ENST00000324685 GSTTP1A0A1W2PQM5 241 aa24.34■■□□□ 1.49
RNF40-201ENST00000324685 GOLGA8AA7E2F4 631 aa24.34■■□□□ 1.49
RNF40-201ENST00000324685 GOLGA8BA8MQT2 603 aa24.34■■□□□ 1.49
RNF40-201ENST00000324685 SLC5A1P13866 664 aa24.34■■□□□ 1.49
RNF40-201ENST00000324685 TNPO1Q92973 898 aaKnown RBP24.34■■□□□ 1.49
RNF40-201ENST00000324685 DHX29Q7Z478 1369 aaKnown RBP24.34■■□□□ 1.49
RNF40-201ENST00000324685 NUTM2BA6NNL0 878 aaPredicted RBP24.34■■□□□ 1.49
RNF40-201ENST00000324685 NUTM2EB1AL46 878 aaPredicted RBP24.34■■□□□ 1.49
RNF40-201ENST00000324685 NUTM2AQ8IVF1 878 aaPredicted RBP24.34■■□□□ 1.49
RNF40-201ENST00000324685 PYM1Q9BRP8 204 aaKnown RBP24.34■■□□□ 1.49
RNF40-201ENST00000324685 MIS18AQ9NYP9 233 aa24.34■■□□□ 1.49
RNF40-201ENST00000324685 CUL5Q93034 780 aa24.34■■□□□ 1.49
RNF40-201ENST00000324685 GOPCQ9HD26 462 aa24.34■■□□□ 1.49
RNF40-201ENST00000324685 EHMT1Q9H9B1 1298 aa24.33■■□□□ 1.49
RNF40-201ENST00000324685 CBX1P83916 185 aa24.33■■□□□ 1.49
RNF40-201ENST00000324685 FSIP1Q8NA03 581 aa24.33■■□□□ 1.49
RNF40-201ENST00000324685 CALCOCO1Q9P1Z2 691 aa24.33■■□□□ 1.49
RNF40-201ENST00000324685 A0A087WZG4 1122 aa24.33■■□□□ 1.49
RNF40-201ENST00000324685 CCDC150Q8NCX0 1101 aa24.33■■□□□ 1.49
RNF40-201ENST00000324685 TAOK3Q9H2K8 898 aa24.33■■□□□ 1.49
RNF40-201ENST00000324685 CCDC194A0A1B0GVG4 234 aa24.33■■□□□ 1.49
RNF40-201ENST00000324685 PTPRCP08575 1304 aa24.33■■□□□ 1.48
RNF40-201ENST00000324685 EVI5LQ96CN4 794 aa24.32■■□□□ 1.48
RNF40-201ENST00000324685 UBA5Q9GZZ9 404 aa24.32■■□□□ 1.48
RNF40-201ENST00000324685 DZIP1Q86YF9 867 aaKnown RBP24.32■■□□□ 1.48
RNF40-201ENST00000324685 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.32■■□□□ 1.48
RNF40-201ENST00000324685 IFIT5Q13325 482 aaKnown RBP24.32■■□□□ 1.48
RNF40-201ENST00000324685 ZNF444Q8N0Y2 327 aaPredicted RBP24.32■■□□□ 1.48
RNF40-201ENST00000324685 USP25Q9UHP3 1055 aa24.32■■□□□ 1.48
RNF40-201ENST00000324685 TDRD12Q587J7 1177 aaKnown RBP24.31■■□□□ 1.48
RNF40-201ENST00000324685 TMOD3Q9NYL9 352 aa24.31■■□□□ 1.48
RNF40-201ENST00000324685 NLRP5P59047 1200 aa24.31■■□□□ 1.48
RNF40-201ENST00000324685 UVSSAQ2YD98 709 aa24.31■■□□□ 1.48
RNF40-201ENST00000324685 FAM114A1Q8IWE2 563 aa24.31■■□□□ 1.48
RNF40-201ENST00000324685 AMPD3Q01432 767 aa24.31■■□□□ 1.48
RNF40-201ENST00000324685 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.31■■□□□ 1.48
RNF40-201ENST00000324685 GUCY1B3Q02153 619 aa24.31■■□□□ 1.48
RNF40-201ENST00000324685 HOOK3Q86VS8 718 aa24.31■■□□□ 1.48
RNF40-201ENST00000324685 DNAAF4Q8WXU2 420 aa24.31■■□□□ 1.48
RNF40-201ENST00000324685 POGZQ7Z3K3 1410 aa24.3■■□□□ 1.48
RNF40-201ENST00000324685 LRPPRCP42704 1394 aaKnown RBP24.3■■□□□ 1.48
RNF40-201ENST00000324685 XPCQ01831 940 aaPredicted RBP24.3■■□□□ 1.48
RNF40-201ENST00000324685 CATIPQ7Z7H3 387 aa24.3■■□□□ 1.48
RNF40-201ENST00000324685 CKAP2LQ8IYA6 745 aa24.3■■□□□ 1.48
RNF40-201ENST00000324685 THUMPD2Q9BTF0 503 aaKnown RBP24.3■■□□□ 1.48
RNF40-201ENST00000324685 TBC1D2Q9BYX2 928 aa24.3■■□□□ 1.48
RNF40-201ENST00000324685 RANBP6O60518 1105 aaKnown RBP24.3■■□□□ 1.48
RNF40-201ENST00000324685 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.3■■□□□ 1.48
RNF40-201ENST00000324685 HYPKQ9NX55 129 aa24.29■■□□□ 1.48
RNF40-201ENST00000324685 BAG4O95429 457 aaKnown RBP24.29■■□□□ 1.48
RNF40-201ENST00000324685 CAVIN2O95810 425 aa24.29■■□□□ 1.48
RNF40-201ENST00000324685 IFIT3O14879 490 aaKnown RBP24.29■■□□□ 1.48
RNF40-201ENST00000324685 SLF2Q8IX21 1173 aa24.29■■□□□ 1.48
RNF40-201ENST00000324685 TMC6Q7Z403 805 aa24.29■■□□□ 1.48
RNF40-201ENST00000324685 CCDC12Q8WUD4 166 aaPredicted RBP24.29■■□□□ 1.48
RNF40-201ENST00000324685 NCAPD3P42695 1498 aa24.29■■□□□ 1.48
RNF40-201ENST00000324685 GJB2P29033 226 aa24.29■■□□□ 1.48
RNF40-201ENST00000324685 KANK3Q6NY19 840 aa24.29■■□□□ 1.48
RNF40-201ENST00000324685 MTIF2P46199 727 aaKnown RBP24.28■■□□□ 1.48
RNF40-201ENST00000324685 CETN1Q12798 172 aa24.28■■□□□ 1.48
RNF40-201ENST00000324685 CCDC8Q9H0W5 538 aaPredicted RBP24.28■■□□□ 1.48
RNF40-201ENST00000324685 CCDC96Q2M329 555 aa24.28■■□□□ 1.48
RNF40-201ENST00000324685 CTNNBL1Q8WYA6 563 aaPredicted RBP24.28■■□□□ 1.48
RNF40-201ENST00000324685 CPLX3Q8WVH0 158 aa24.28■■□□□ 1.48
RNF40-201ENST00000324685 SMARCC1Q92922 1105 aaPredicted RBP24.28■■□□□ 1.48
RNF40-201ENST00000324685 CALML4Q96GE6 196 aa24.27■■□□□ 1.48
RNF40-201ENST00000324685 NF2P35240 595 aa24.27■■□□□ 1.48
RNF40-201ENST00000324685 STX6O43752 255 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms