RNA–Protein interactions for RNA: ENST00000322272.11

TNFSF12-202, Transcript of TNF superfamily member 12, humanhuman

TSL 1 (best)

Gene TNFSF12, Length 1,625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-202ENST00000322272 VSIG10Q8N0Z9 540 aa30.76■■■□□ 2.51
TNFSF12-202ENST00000322272 TRIM35Q9UPQ4 493 aa30.76■■■□□ 2.51
TNFSF12-202ENST00000322272 MSL1Q68DK7 614 aa30.75■■■□□ 2.51
TNFSF12-202ENST00000322272 TRMT2AQ8IZ69 625 aaKnown RBP30.75■■■□□ 2.51
TNFSF12-202ENST00000322272 ZNF496Q96IT1 587 aaPredicted RBP30.75■■■□□ 2.51
TNFSF12-202ENST00000322272 TJP1Q07157 1748 aa30.75■■■□□ 2.51
TNFSF12-202ENST00000322272 POLD1P28340 1107 aa30.74■■■□□ 2.51
TNFSF12-202ENST00000322272 SUPT16HQ9Y5B9 1047 aaKnown RBP30.74■■■□□ 2.51
TNFSF12-202ENST00000322272 RPS6KA4O75676 772 aa30.73■■■□□ 2.51
TNFSF12-202ENST00000322272 CICQ96RK0 1608 aaPredicted RBP30.73■■■□□ 2.51
TNFSF12-202ENST00000322272 KCNQ3O43525 872 aa30.73■■■□□ 2.51
TNFSF12-202ENST00000322272 NEFLP07196 543 aa30.73■■■□□ 2.51
TNFSF12-202ENST00000322272 TRAPPC3LQ5T215 181 aa30.73■■■□□ 2.51
TNFSF12-202ENST00000322272 ARXQ96QS3 562 aa30.73■■■□□ 2.51
TNFSF12-202ENST00000322272 UBR2Q8IWV8 1755 aa30.72■■■□□ 2.51
TNFSF12-202ENST00000322272 CYP19A1P11511 503 aaPredicted RBP30.71■■■□□ 2.51
TNFSF12-202ENST00000322272 FMNL2Q96PY5 1086 aa30.71■■■□□ 2.51
TNFSF12-202ENST00000322272 THUMPD2Q9BTF0 503 aaKnown RBP30.71■■■□□ 2.51
TNFSF12-202ENST00000322272 IL16Q14005 1332 aa30.71■■■□□ 2.51
TNFSF12-202ENST00000322272 HEG1Q9ULI3 1381 aa30.7■■■□□ 2.51
TNFSF12-202ENST00000322272 CALD1Q05682 793 aaKnown RBP30.7■■■□□ 2.51
TNFSF12-202ENST00000322272 TAF7Q15545 349 aaPredicted RBP30.7■■■□□ 2.51
TNFSF12-202ENST00000322272 INTS5Q6P9B9 1019 aaKnown RBP30.7■■■□□ 2.51
TNFSF12-202ENST00000322272 SPINK5Q9NQ38 1064 aaPredicted RBP30.7■■■□□ 2.51
TNFSF12-202ENST00000322272 CCDC87Q9NVE4 849 aa30.69■■■□□ 2.5
TNFSF12-202ENST00000322272 ADRA2BP18089 450 aa30.69■■■□□ 2.5
TNFSF12-202ENST00000322272 ARHGEF1Q92888 912 aaKnown RBP30.69■■■□□ 2.5
TNFSF12-202ENST00000322272 MYH14Q7Z406 1995 aaKnown RBP30.69■■■□□ 2.5
TNFSF12-202ENST00000322272 MYH16Q9H6N6 1097 aa30.68■■■□□ 2.5
TNFSF12-202ENST00000322272 FHDC1Q9C0D6 1143 aaPredicted RBP30.67■■■□□ 2.5
TNFSF12-202ENST00000322272 MIS18AQ9NYP9 233 aa30.67■■■□□ 2.5
TNFSF12-202ENST00000322272 RCAN3Q9UKA8 241 aa30.67■■■□□ 2.5
TNFSF12-202ENST00000322272 COL24A1Q17RW2 1714 aa30.66■■■□□ 2.5
TNFSF12-202ENST00000322272 RFC4P35249 363 aa30.65■■■□□ 2.5
TNFSF12-202ENST00000322272 STARD3NLO95772 234 aa30.65■■■□□ 2.5
TNFSF12-202ENST00000322272 TEX13AQ9BXU3 409 aaPredicted RBP30.64■■■□□ 2.5
TNFSF12-202ENST00000322272 ZBTB1Q9Y2K1 713 aa30.64■■■□□ 2.5
TNFSF12-202ENST00000322272 KLHL34Q8N239 644 aa30.62■■■□□ 2.49
TNFSF12-202ENST00000322272 SYT17Q9BSW7 474 aa30.62■■■□□ 2.49
TNFSF12-202ENST00000322272 SOS1Q07889 1333 aaPredicted RBP30.61■■■□□ 2.49
TNFSF12-202ENST00000322272 RNF123Q5XPI4 1314 aa30.61■■■□□ 2.49
TNFSF12-202ENST00000322272 CANXP27824 592 aaKnown RBP30.6■■■□□ 2.49
TNFSF12-202ENST00000322272 PRAMEF22A3QJZ6 481 aa30.58■■■□□ 2.49
TNFSF12-202ENST00000322272 SNRPA1P09661 255 aaKnown RBP30.58■■■□□ 2.49
TNFSF12-202ENST00000322272 GYS1P13807 737 aa30.58■■■□□ 2.49
TNFSF12-202ENST00000322272 FANCIQ9NVI1 1328 aa30.57■■■□□ 2.48
TNFSF12-202ENST00000322272 SRP68Q9UHB9 627 aaKnown RBP30.57■■■□□ 2.48
TNFSF12-202ENST00000322272 USP16Q9Y5T5 823 aa30.57■■■□□ 2.48
TNFSF12-202ENST00000322272 NLGN1Q8N2Q7 840 aa30.56■■■□□ 2.48
TNFSF12-202ENST00000322272 COL15A1P39059 1388 aa30.56■■■□□ 2.48
TNFSF12-202ENST00000322272 USP42Q9H9J4 1324 aaKnown RBP30.56■■■□□ 2.48
TNFSF12-202ENST00000322272 LAS1LQ9Y4W2 734 aaKnown RBP30.55■■■□□ 2.48
TNFSF12-202ENST00000322272 A1BGP04217 495 aa30.55■■■□□ 2.48
TNFSF12-202ENST00000322272 C4AP0C0L4 1744 aa30.55■■■□□ 2.48
TNFSF12-202ENST00000322272 GNAI1P63096 354 aa30.55■■■□□ 2.48
TNFSF12-202ENST00000322272 FKBP8Q14318 412 aa30.55■■■□□ 2.48
TNFSF12-202ENST00000322272 IFT57Q9NWB7 429 aa30.55■■■□□ 2.48
TNFSF12-202ENST00000322272 MMP10P09238 476 aa30.54■■■□□ 2.48
TNFSF12-202ENST00000322272 TSPYL4Q9UJ04 414 aa30.54■■■□□ 2.48
TNFSF12-202ENST00000322272 ZPR1O75312 459 aa30.53■■■□□ 2.48
TNFSF12-202ENST00000322272 EIF5P55010 431 aaKnown RBP30.52■■■□□ 2.48
TNFSF12-202ENST00000322272 EIF4A1P60842 406 aaKnown RBP30.52■■■□□ 2.48
TNFSF12-202ENST00000322272 CFAP44Q96MT7 982 aa30.52■■■□□ 2.48
TNFSF12-202ENST00000322272 ZNF330Q9Y3S2 320 aaPredicted RBP30.52■■■□□ 2.48
TNFSF12-202ENST00000322272 KDM3BQ7LBC6 1761 aa30.51■■■□□ 2.48
TNFSF12-202ENST00000322272 RRP1P56182 461 aaKnown RBP30.51■■■□□ 2.47
TNFSF12-202ENST00000322272 USPL1Q5W0Q7 1092 aa30.51■■■□□ 2.47
TNFSF12-202ENST00000322272 CT47B1P0C2W7 299 aaPredicted RBP30.5■■■□□ 2.47
TNFSF12-202ENST00000322272 TSR2Q969E8 191 aaKnown RBP30.5■■■□□ 2.47
TNFSF12-202ENST00000322272 NARFQ9UHQ1 456 aa30.5■■■□□ 2.47
TNFSF12-202ENST00000322272 IL6STP40189 918 aaPredicted RBP30.49■■■□□ 2.47
TNFSF12-202ENST00000322272 BABAM1Q9NWV8 329 aa30.49■■■□□ 2.47
TNFSF12-202ENST00000322272 GIGYF1O75420 1035 aaPredicted RBP30.48■■■□□ 2.47
TNFSF12-202ENST00000322272 PIP4K2AP48426 406 aaPredicted RBP30.48■■■□□ 2.47
TNFSF12-202ENST00000322272 ZNF853P0CG23 659 aa30.47■■■□□ 2.47
TNFSF12-202ENST00000322272 NPM2Q86SE8 214 aaKnown RBP30.47■■■□□ 2.47
TNFSF12-202ENST00000322272 NLGN2Q8NFZ4 835 aa30.47■■■□□ 2.47
TNFSF12-202ENST00000322272 A0A087WZG4 1122 aa30.47■■■□□ 2.47
TNFSF12-202ENST00000322272 DCAF8L1A6NGE4 600 aa30.45■■■□□ 2.47
TNFSF12-202ENST00000322272 CD2APQ9Y5K6 639 aa30.45■■■□□ 2.47
TNFSF12-202ENST00000322272 CHL1O00533 1208 aa30.44■■■□□ 2.46
TNFSF12-202ENST00000322272 PARP3Q9Y6F1 533 aa30.44■■■□□ 2.46
TNFSF12-202ENST00000322272 EXOSC9Q06265 439 aaKnown RBP30.44■■■□□ 2.46
TNFSF12-202ENST00000322272 ERICH6BQ5W0A0 696 aa30.44■■■□□ 2.46
TNFSF12-202ENST00000322272 MBIPQ9NS73 344 aa30.44■■■□□ 2.46
TNFSF12-202ENST00000322272 TBC1D2BQ9UPU7 963 aa30.44■■■□□ 2.46
TNFSF12-202ENST00000322272 IRX6P78412 446 aaPredicted RBP30.42■■■□□ 2.46
TNFSF12-202ENST00000322272 BCL2L12Q9HB09 334 aa30.42■■■□□ 2.46
TNFSF12-202ENST00000322272 NBPF26B4DH59 902 aa30.41■■■□□ 2.46
TNFSF12-202ENST00000322272 NBPF10Q6P3W6 841 aaKnown RBP30.41■■■□□ 2.46
TNFSF12-202ENST00000322272 NBPF15Q8N660 670 aa30.41■■■□□ 2.46
TNFSF12-202ENST00000322272 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.41■■■□□ 2.46
TNFSF12-202ENST00000322272 DDR1Q08345 913 aa30.4■■■□□ 2.46
TNFSF12-202ENST00000322272 TM4SF1P30408 202 aa30.39■■■□□ 2.46
TNFSF12-202ENST00000322272 DZIP3Q86Y13 1208 aaKnown RBP30.38■■■□□ 2.45
TNFSF12-202ENST00000322272 NFIXQ14938 502 aa30.37■■■□□ 2.45
TNFSF12-202ENST00000322272 LAMB4A4D0S4 1761 aa30.37■■■□□ 2.45
TNFSF12-202ENST00000322272 GOLGB1Q14789 3259 aaKnown RBP30.37■■■□□ 2.45
TNFSF12-202ENST00000322272 UTRNP46939 3433 aa30.37■■■□□ 2.45
TNFSF12-202ENST00000322272 POLRMTO00411 1230 aaKnown RBP30.36■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms