RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.43■□□□□ 0.38
PRPF18-201ENST00000320054 DBF4Q9UBU7 674 aaPredicted RBP17.43■□□□□ 0.38
PRPF18-201ENST00000320054 KIF16BQ96L93 1317 aa17.43■□□□□ 0.38
PRPF18-201ENST00000320054 STARD3NLO95772 234 aa17.42■□□□□ 0.38
PRPF18-201ENST00000320054 DNAJC10Q8IXB1 793 aa17.42■□□□□ 0.38
PRPF18-201ENST00000320054 BCL2L13Q9BXK5 485 aa17.42■□□□□ 0.38
PRPF18-201ENST00000320054 DDX21Q9NR30 783 aaKnown RBP eCLIP17.42■□□□□ 0.38
PRPF18-201ENST00000320054 TCERG1O14776 1098 aaKnown RBP17.41■□□□□ 0.38
PRPF18-201ENST00000320054 SLC4A2P04920 1241 aa17.41■□□□□ 0.38
PRPF18-201ENST00000320054 ATP6V1AP38606 617 aa17.41■□□□□ 0.38
PRPF18-201ENST00000320054 RRP1P56182 461 aaKnown RBP17.41■□□□□ 0.38
PRPF18-201ENST00000320054 CHPF2Q9P2E5 772 aa17.41■□□□□ 0.38
PRPF18-201ENST00000320054 N4BP2Q86UW6 1770 aaPredicted RBP17.4■□□□□ 0.38
PRPF18-201ENST00000320054 PLSCR1O15162 318 aa17.4■□□□□ 0.38
PRPF18-201ENST00000320054 CYP19A1P11511 503 aaPredicted RBP17.4■□□□□ 0.38
PRPF18-201ENST00000320054 ARHGAP45Q92619 1136 aa17.4■□□□□ 0.38
PRPF18-201ENST00000320054 NECTIN2Q92692 538 aa17.4■□□□□ 0.38
PRPF18-201ENST00000320054 HYPKQ9NX55 129 aa17.4■□□□□ 0.38
PRPF18-201ENST00000320054 IPO8O15397 1037 aaKnown RBP17.39■□□□□ 0.37
PRPF18-201ENST00000320054 HMGB2P26583 209 aaKnown RBP17.39■□□□□ 0.37
PRPF18-201ENST00000320054 ITPK1Q13572 414 aa17.39■□□□□ 0.37
PRPF18-201ENST00000320054 PDIA6Q15084 440 aa17.39■□□□□ 0.37
PRPF18-201ENST00000320054 PTPRCP08575 1304 aa17.39■□□□□ 0.37
PRPF18-201ENST00000320054 C4BP0C0L5 1744 aa17.38■□□□□ 0.37
PRPF18-201ENST00000320054 SLC27A3Q5K4L6 730 aa17.38■□□□□ 0.37
PRPF18-201ENST00000320054 CCNL1Q9UK58 526 aaPredicted RBP17.38■□□□□ 0.37
PRPF18-201ENST00000320054 NOB1Q9ULX3 412 aaKnown RBP17.38■□□□□ 0.37
PRPF18-201ENST00000320054 APBA3O96018 575 aa17.37■□□□□ 0.37
PRPF18-201ENST00000320054 A1BGP04217 495 aa17.37■□□□□ 0.37
PRPF18-201ENST00000320054 ZKSCAN2Q63HK3 967 aa17.37■□□□□ 0.37
PRPF18-201ENST00000320054 NUP188Q5SRE5 1749 aa17.36■□□□□ 0.37
PRPF18-201ENST00000320054 ARFGEF2Q9Y6D5 1785 aa17.36■□□□□ 0.37
PRPF18-201ENST00000320054 NBPF26B4DH59 902 aa17.36■□□□□ 0.37
PRPF18-201ENST00000320054 MS4A1P11836 297 aa17.36■□□□□ 0.37
PRPF18-201ENST00000320054 CANXP27824 592 aaKnown RBP17.36■□□□□ 0.37
PRPF18-201ENST00000320054 FLIIQ13045 1269 aa17.36■□□□□ 0.37
PRPF18-201ENST00000320054 PROSER3Q2NL68 480 aa17.36■□□□□ 0.37
PRPF18-201ENST00000320054 NBPF14Q5TI25 921 aa17.36■□□□□ 0.37
PRPF18-201ENST00000320054 NBPF10Q6P3W6 841 aaKnown RBP17.36■□□□□ 0.37
PRPF18-201ENST00000320054 ATF7IPQ6VMQ6 1270 aa17.36■□□□□ 0.37
PRPF18-201ENST00000320054 G2E3Q7L622 706 aa17.36■□□□□ 0.37
PRPF18-201ENST00000320054 LRP10Q7Z4F1 713 aa17.36■□□□□ 0.37
PRPF18-201ENST00000320054 NBPF15Q8N660 670 aa17.36■□□□□ 0.37
PRPF18-201ENST00000320054 FRAT1Q92837 279 aaPredicted RBP17.36■□□□□ 0.37
PRPF18-201ENST00000320054 CNTNAP4Q9C0A0 1308 aa17.36■□□□□ 0.37
PRPF18-201ENST00000320054 PDE3AQ14432 1141 aa17.35■□□□□ 0.37
PRPF18-201ENST00000320054 RC3H1Q5TC82 1133 aaKnown RBP17.35■□□□□ 0.37
PRPF18-201ENST00000320054 API5Q9BZZ5 524 aaKnown RBP17.35■□□□□ 0.37
PRPF18-201ENST00000320054 CCDC87Q9NVE4 849 aa17.35■□□□□ 0.37
PRPF18-201ENST00000320054 UBR3Q6ZT12 1888 aa17.35■□□□□ 0.37
PRPF18-201ENST00000320054 PLIN1O60240 522 aa17.34■□□□□ 0.37
PRPF18-201ENST00000320054 ANXA1P04083 346 aa17.34■□□□□ 0.37
PRPF18-201ENST00000320054 CRKLP46109 303 aaKnown RBP17.34■□□□□ 0.37
PRPF18-201ENST00000320054 INTS5Q6P9B9 1019 aaKnown RBP17.34■□□□□ 0.37
PRPF18-201ENST00000320054 CCDC125Q86Z20 511 aa17.34■□□□□ 0.37
PRPF18-201ENST00000320054 LINC00116Q8NCU8 138 aa17.34■□□□□ 0.37
PRPF18-201ENST00000320054 PHAXQ9H814 394 aaKnown RBP17.34■□□□□ 0.37
PRPF18-201ENST00000320054 TRIM27P14373 513 aa17.33■□□□□ 0.36
PRPF18-201ENST00000320054 MYL6BP14649 208 aa17.33■□□□□ 0.36
PRPF18-201ENST00000320054 IL6STP40189 918 aaPredicted RBP17.33■□□□□ 0.36
PRPF18-201ENST00000320054 TXNRD1Q16881 649 aa17.33■□□□□ 0.36
PRPF18-201ENST00000320054 PXDNLA1KZ92 1463 aa17.32■□□□□ 0.36
PRPF18-201ENST00000320054 FKBP5Q13451 457 aaPredicted RBP17.32■□□□□ 0.36
PRPF18-201ENST00000320054 PROM2Q8N271 834 aa17.32■□□□□ 0.36
PRPF18-201ENST00000320054 LRRC4BQ9NT99 713 aa17.32■□□□□ 0.36
PRPF18-201ENST00000320054 ZBTB1Q9Y2K1 713 aa17.32■□□□□ 0.36
PRPF18-201ENST00000320054 NUP98P52948 1817 aa17.32■□□□□ 0.36
PRPF18-201ENST00000320054 ANKRD36CQ5JPF3 1778 aa17.31■□□□□ 0.36
PRPF18-201ENST00000320054 BCORQ6W2J9 1755 aa17.31■□□□□ 0.36
PRPF18-201ENST00000320054 ABCC4O15439 1325 aa17.31■□□□□ 0.36
PRPF18-201ENST00000320054 DDX58O95786 925 aaKnown RBP17.31■□□□□ 0.36
PRPF18-201ENST00000320054 PIP4K2AP48426 406 aaPredicted RBP17.31■□□□□ 0.36
PRPF18-201ENST00000320054 KCNQ4P56696 695 aa17.31■□□□□ 0.36
PRPF18-201ENST00000320054 SF3B2Q13435 895 aaKnown RBP17.31■□□□□ 0.36
PRPF18-201ENST00000320054 DZIP1LQ8IYY4 767 aaKnown RBP17.31■□□□□ 0.36
PRPF18-201ENST00000320054 NEFLP07196 543 aa17.3■□□□□ 0.36
PRPF18-201ENST00000320054 EIF5P55010 431 aaKnown RBP17.3■□□□□ 0.36
PRPF18-201ENST00000320054 COPS6Q7L5N1 327 aa17.3■□□□□ 0.36
PRPF18-201ENST00000320054 XAGE3Q8WTP9 111 aa17.3■□□□□ 0.36
PRPF18-201ENST00000320054 AFDNP55196 1824 aaKnown RBP17.3■□□□□ 0.36
PRPF18-201ENST00000320054 TUBGCP6Q96RT7 1819 aa17.3■□□□□ 0.36
PRPF18-201ENST00000320054 C4AP0C0L4 1744 aa17.3■□□□□ 0.36
PRPF18-201ENST00000320054 QSER1Q2KHR3 1735 aa17.3■□□□□ 0.36
PRPF18-201ENST00000320054 ADCY9O60503 1353 aa17.29■□□□□ 0.36
PRPF18-201ENST00000320054 BAG6P46379 1132 aa17.29■□□□□ 0.36
PRPF18-201ENST00000320054 KSR2Q6VAB6 950 aa17.29■□□□□ 0.36
PRPF18-201ENST00000320054 FTSJ3Q8IY81 847 aaKnown RBP17.29■□□□□ 0.36
PRPF18-201ENST00000320054 CAMKK2Q96RR4 588 aa17.29■□□□□ 0.36
PRPF18-201ENST00000320054 TNNQ9UQP3 1299 aa17.29■□□□□ 0.36
PRPF18-201ENST00000320054 RPS6KA4O75676 772 aa17.28■□□□□ 0.36
PRPF18-201ENST00000320054 C20orf194Q5TEA3 1177 aa17.28■□□□□ 0.36
PRPF18-201ENST00000320054 PLBD2Q8NHP8 589 aa17.28■□□□□ 0.36
PRPF18-201ENST00000320054 SCN7AQ01118 1682 aa17.28■□□□□ 0.36
PRPF18-201ENST00000320054 PI4KAP2A4QPH2 592 aa17.27■□□□□ 0.36
PRPF18-201ENST00000320054 RLBP1P12271 317 aa17.27■□□□□ 0.36
PRPF18-201ENST00000320054 AIMP1Q12904 312 aaKnown RBP17.27■□□□□ 0.36
PRPF18-201ENST00000320054 INTS3Q68E01 1043 aaKnown RBP17.27■□□□□ 0.36
PRPF18-201ENST00000320054 ANKRD13DQ6ZTN6 518 aa17.27■□□□□ 0.36
PRPF18-201ENST00000320054 PI4KAP1Q8N8J0 262 aa17.27■□□□□ 0.36
PRPF18-201ENST00000320054 PANK1Q8TE04 598 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms