RNA–Protein interactions for RNA: ENST00000314121.8

ZNF541-202, Transcript of zinc finger protein 541, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ZNF541, Length 4,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-202ENST00000314121 CAVIN2O95810 425 aa16.29■□□□□ 0.2
ZNF541-202ENST00000314121 RBM25P49756 843 aaKnown RBP16.29■□□□□ 0.2
ZNF541-202ENST00000314121 MAGEC2Q9UBF1 373 aaPredicted RBP16.29■□□□□ 0.2
ZNF541-202ENST00000314121 NEMFO60524 1076 aa16.29■□□□□ 0.2
ZNF541-202ENST00000314121 HS1BP3Q53T59 392 aa16.29■□□□□ 0.2
ZNF541-202ENST00000314121 TFIP11Q9UBB9 837 aaKnown RBP16.29■□□□□ 0.2
ZNF541-202ENST00000314121 POLKQ9UBT6 870 aa16.29■□□□□ 0.2
ZNF541-202ENST00000314121 RAD21O60216 631 aa16.29■□□□□ 0.2
ZNF541-202ENST00000314121 LEKR1Q6ZMV7 388 aa16.29■□□□□ 0.2
ZNF541-202ENST00000314121 RHPN1Q8TCX5 695 aa16.29■□□□□ 0.2
ZNF541-202ENST00000314121 ZNHIT6Q9NWK9 470 aaKnown RBP16.29■□□□□ 0.2
ZNF541-202ENST00000314121 ERLIN1O75477 346 aa16.28■□□□□ 0.2
ZNF541-202ENST00000314121 ZSCAN22P10073 491 aaPredicted RBP16.28■□□□□ 0.2
ZNF541-202ENST00000314121 ZNF165P49910 485 aa16.28■□□□□ 0.2
ZNF541-202ENST00000314121 ZKSCAN5Q9Y2L8 839 aa16.28■□□□□ 0.2
ZNF541-202ENST00000314121 TNNT1P13805 278 aa16.28■□□□□ 0.2
ZNF541-202ENST00000314121 PIK3R4Q99570 1358 aa16.28■□□□□ 0.2
ZNF541-202ENST00000314121 C16orf71Q8IYS4 520 aaPredicted RBP16.28■□□□□ 0.2
ZNF541-202ENST00000314121 ADGRL2O95490 1459 aa16.28■□□□□ 0.2
ZNF541-202ENST00000314121 SLC3A2P08195 630 aaKnown RBP16.28■□□□□ 0.2
ZNF541-202ENST00000314121 BLMP54132 1417 aaPredicted RBP16.27■□□□□ 0.2
ZNF541-202ENST00000314121 HYPKQ9NX55 129 aa16.27■□□□□ 0.2
ZNF541-202ENST00000314121 PI4KAP2A4QPH2 592 aa16.27■□□□□ 0.19
ZNF541-202ENST00000314121 PRIM1P49642 420 aaKnown RBP16.27■□□□□ 0.19
ZNF541-202ENST00000314121 TSPYL6Q8N831 410 aa16.27■□□□□ 0.19
ZNF541-202ENST00000314121 PI4KAP1Q8N8J0 262 aa16.27■□□□□ 0.19
ZNF541-202ENST00000314121 PLEKHM2Q8IWE5 1019 aa16.26■□□□□ 0.19
ZNF541-202ENST00000314121 A2MP01023 1474 aa16.26■□□□□ 0.19
ZNF541-202ENST00000314121 WASF1Q92558 559 aa16.26■□□□□ 0.19
ZNF541-202ENST00000314121 RBM33Q96EV2 1170 aaKnown RBP16.26■□□□□ 0.19
ZNF541-202ENST00000314121 C16orf45Q96MC5 204 aaPredicted RBP16.26■□□□□ 0.19
ZNF541-202ENST00000314121 FAM177BA6PVY3 158 aa16.26■□□□□ 0.19
ZNF541-202ENST00000314121 CBX1P83916 185 aa16.26■□□□□ 0.19
ZNF541-202ENST00000314121 C8orf76Q96K31 380 aa16.26■□□□□ 0.19
ZNF541-202ENST00000314121 NOL7Q9UMY1 257 aaKnown RBP16.26■□□□□ 0.19
ZNF541-202ENST00000314121 KIAA0556O60303 1618 aa16.26■□□□□ 0.19
ZNF541-202ENST00000314121 EIF3JO75822 258 aaKnown RBP16.26■□□□□ 0.19
ZNF541-202ENST00000314121 USHBP1Q8N6Y0 703 aa16.26■□□□□ 0.19
ZNF541-202ENST00000314121 GNL3LQ9NVN8 582 aaKnown RBP16.26■□□□□ 0.19
ZNF541-202ENST00000314121 STIM1Q13586 685 aa16.25■□□□□ 0.19
ZNF541-202ENST00000314121 ZBTB7BO15156 539 aaPredicted RBP16.25■□□□□ 0.19
ZNF541-202ENST00000314121 ATP8B2P98198 1209 aa16.25■□□□□ 0.19
ZNF541-202ENST00000314121 ANKLE2Q86XL3 938 aa16.25■□□□□ 0.19
ZNF541-202ENST00000314121 NUP133Q8WUM0 1156 aa16.25■□□□□ 0.19
ZNF541-202ENST00000314121 HSP90AB2PQ58FF8 381 aa16.25■□□□□ 0.19
ZNF541-202ENST00000314121 GIMAP6Q6P9H5 292 aa16.25■□□□□ 0.19
ZNF541-202ENST00000314121 CEP85Q6P2H3 762 aa16.25■□□□□ 0.19
ZNF541-202ENST00000314121 TRIM34Q9BYJ4 488 aa16.25■□□□□ 0.19
ZNF541-202ENST00000314121 HMG20BQ9P0W2 317 aa16.25■□□□□ 0.19
ZNF541-202ENST00000314121 IFIT1P09914 478 aaKnown RBP16.24■□□□□ 0.19
ZNF541-202ENST00000314121 TMCO3Q6UWJ1 677 aa16.24■□□□□ 0.19
ZNF541-202ENST00000314121 USP48Q86UV5 1035 aa16.24■□□□□ 0.19
ZNF541-202ENST00000314121 MYD88Q99836 296 aa16.24■□□□□ 0.19
ZNF541-202ENST00000314121 MTMR7Q9Y216 660 aa16.24■□□□□ 0.19
ZNF541-202ENST00000314121 DMRT2Q9Y5R5 561 aa16.24■□□□□ 0.19
ZNF541-202ENST00000314121 EPS15P42566 896 aa16.24■□□□□ 0.19
ZNF541-202ENST00000314121 MPRIPQ6WCQ1 1025 aa16.24■□□□□ 0.19
ZNF541-202ENST00000314121 MPHOSPH8Q99549 860 aa16.24■□□□□ 0.19
ZNF541-202ENST00000314121 ACEP12821 1306 aa16.24■□□□□ 0.19
ZNF541-202ENST00000314121 ZSCAN12O43309 604 aa16.24■□□□□ 0.19
ZNF541-202ENST00000314121 TOM1L2Q6ZVM7 507 aa16.24■□□□□ 0.19
ZNF541-202ENST00000314121 AKAP2Q9Y2D5 859 aa16.24■□□□□ 0.19
ZNF541-202ENST00000314121 TRAPPC8Q9Y2L5 1435 aa16.24■□□□□ 0.19
ZNF541-202ENST00000314121 GSDMDP57764 484 aa16.23■□□□□ 0.19
ZNF541-202ENST00000314121 STK11IPQ8N1F8 1099 aa16.23■□□□□ 0.19
ZNF541-202ENST00000314121 INTS4Q96HW7 963 aaKnown RBP16.23■□□□□ 0.19
ZNF541-202ENST00000314121 UBAC1Q9BSL1 405 aa16.23■□□□□ 0.19
ZNF541-202ENST00000314121 IDH1O75874 414 aaKnown RBP16.23■□□□□ 0.19
ZNF541-202ENST00000314121 USP26Q9BXU7 913 aa16.23■□□□□ 0.19
ZNF541-202ENST00000314121 AMOTL2Q9Y2J4 779 aa16.23■□□□□ 0.19
ZNF541-202ENST00000314121 ZC3H6P61129 1189 aaKnown RBP16.23■□□□□ 0.19
ZNF541-202ENST00000314121 NOLC1Q14978 699 aaKnown RBP eCLIP16.23■□□□□ 0.19
ZNF541-202ENST00000314121 AXDND1Q5T1B0 1012 aaPredicted RBP16.23■□□□□ 0.19
ZNF541-202ENST00000314121 FSIP1Q8NA03 581 aa16.23■□□□□ 0.19
ZNF541-202ENST00000314121 CGNQ9P2M7 1197 aaKnown RBP16.23■□□□□ 0.19
ZNF541-202ENST00000314121 TDO2P48775 406 aa16.22■□□□□ 0.19
ZNF541-202ENST00000314121 GUCY1B3Q02153 619 aa16.22■□□□□ 0.19
ZNF541-202ENST00000314121 NCBP3Q53F19 620 aaKnown RBP16.22■□□□□ 0.19
ZNF541-202ENST00000314121 ZGPATQ8N5A5 531 aaKnown RBP16.22■□□□□ 0.19
ZNF541-202ENST00000314121 PHACTR3Q96KR7 559 aa16.22■□□□□ 0.19
ZNF541-202ENST00000314121 DENND4BO75064 1496 aaPredicted RBP16.22■□□□□ 0.19
ZNF541-202ENST00000314121 STX1AQ16623 288 aa16.22■□□□□ 0.19
ZNF541-202ENST00000314121 ARHGAP29Q52LW3 1261 aa16.22■□□□□ 0.19
ZNF541-202ENST00000314121 NEK1Q96PY6 1258 aa16.22■□□□□ 0.19
ZNF541-202ENST00000314121 CNPY2Q9Y2B0 182 aa16.22■□□□□ 0.19
ZNF541-202ENST00000314121 MAP3K2Q9Y2U5 619 aa16.22■□□□□ 0.19
ZNF541-202ENST00000314121 H0YHG0 523 aa16.21■□□□□ 0.19
ZNF541-202ENST00000314121 FAM200AQ8TCP9 573 aa16.21■□□□□ 0.19
ZNF541-202ENST00000314121 ZSCAN16Q9H4T2 348 aaPredicted RBP16.21■□□□□ 0.19
ZNF541-202ENST00000314121 PHF8Q9UPP1 1060 aa16.21■□□□□ 0.19
ZNF541-202ENST00000314121 AIDAQ96BJ3 306 aa16.21■□□□□ 0.19
ZNF541-202ENST00000314121 CDK5RAP3Q96JB5 506 aa16.21■□□□□ 0.19
ZNF541-202ENST00000314121 EPB41L2O43491 1005 aaKnown RBP16.21■□□□□ 0.19
ZNF541-202ENST00000314121 CEP131Q9UPN4 1083 aa16.21■□□□□ 0.19
ZNF541-202ENST00000314121 URI1O94763 535 aaPredicted RBP16.2■□□□□ 0.18
ZNF541-202ENST00000314121 PRDM10Q9NQV6 1147 aa16.2■□□□□ 0.18
ZNF541-202ENST00000314121 STRN4Q9NRL3 753 aa16.2■□□□□ 0.18
ZNF541-202ENST00000314121 TRMT1Q9NXH9 659 aaKnown RBP16.2■□□□□ 0.18
ZNF541-202ENST00000314121 TOP1P11387 765 aaKnown RBP16.2■□□□□ 0.18
ZNF541-202ENST00000314121 TAF3Q5VWG9 929 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms