RNA–Protein interactions for RNA: ENST00000313050.11

SEC16A-203, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SEC16A, Length 8,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-203ENST00000313050 SSBP05455 408 aaKnown RBP eCLIP12.14□□□□□ -0.47
SEC16A-203ENST00000313050 CEP85LQ5SZL2 805 aa12.13□□□□□ -0.47
SEC16A-203ENST00000313050 BMP2KQ9NSY1 1161 aaPredicted RBP12.13□□□□□ -0.47
SEC16A-203ENST00000313050 SATB2Q9UPW6 733 aa12.13□□□□□ -0.47
SEC16A-203ENST00000313050 CDKL5O76039 1030 aa12.13□□□□□ -0.47
SEC16A-203ENST00000313050 ATP2B1P20020 1258 aa12.13□□□□□ -0.47
SEC16A-203ENST00000313050 MICAL1Q8TDZ2 1067 aa12.13□□□□□ -0.47
SEC16A-203ENST00000313050 TPX2Q9ULW0 747 aaKnown RBP12.13□□□□□ -0.47
SEC16A-203ENST00000313050 TUBB4AP04350 444 aa12.13□□□□□ -0.47
SEC16A-203ENST00000313050 HDXQ7Z353 690 aa12.13□□□□□ -0.47
SEC16A-203ENST00000313050 CAMK4Q16566 473 aa12.13□□□□□ -0.47
SEC16A-203ENST00000313050 RASAL2Q9UJF2 1139 aa12.13□□□□□ -0.47
SEC16A-203ENST00000313050 LRRC23Q53EV4 343 aaPredicted RBP12.13□□□□□ -0.47
SEC16A-203ENST00000313050 CCDC12Q8WUD4 166 aaPredicted RBP12.13□□□□□ -0.47
SEC16A-203ENST00000313050 TMX1Q9H3N1 280 aa12.13□□□□□ -0.47
SEC16A-203ENST00000313050 CETN3O15182 167 aa12.13□□□□□ -0.47
SEC16A-203ENST00000313050 RNF10Q8N5U6 811 aaKnown RBP12.13□□□□□ -0.47
SEC16A-203ENST00000313050 PLEKHH1Q9ULM0 1364 aa12.13□□□□□ -0.47
SEC16A-203ENST00000313050 CTNNA2P26232 953 aa12.12□□□□□ -0.47
SEC16A-203ENST00000313050 PEX19P40855 299 aa12.12□□□□□ -0.47
SEC16A-203ENST00000313050 NEDD9Q14511 834 aa12.12□□□□□ -0.47
SEC16A-203ENST00000313050 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.12□□□□□ -0.47
SEC16A-203ENST00000313050 GSDMBQ8TAX9 411 aa12.12□□□□□ -0.47
SEC16A-203ENST00000313050 TUBBP07437 444 aa12.12□□□□□ -0.47
SEC16A-203ENST00000313050 SLC3A2P08195 630 aaKnown RBP12.12□□□□□ -0.47
SEC16A-203ENST00000313050 XAB2Q9HCS7 855 aaKnown RBP12.12□□□□□ -0.47
SEC16A-203ENST00000313050 CCDC172P0C7W6 258 aa12.12□□□□□ -0.47
SEC16A-203ENST00000313050 IFI16Q16666 785 aaKnown RBP12.12□□□□□ -0.47
SEC16A-203ENST00000313050 CEP131Q9UPN4 1083 aa12.12□□□□□ -0.47
SEC16A-203ENST00000313050 SAFB2Q14151 953 aaKnown RBP eCLIP12.12□□□□□ -0.47
SEC16A-203ENST00000313050 LRRC45Q96CN5 670 aa12.12□□□□□ -0.47
SEC16A-203ENST00000313050 DNAJC8O75937 253 aaPredicted RBP12.11□□□□□ -0.47
SEC16A-203ENST00000313050 CCDC92Q53HC0 331 aaPredicted RBP12.11□□□□□ -0.47
SEC16A-203ENST00000313050 SPTY2D1Q68D10 685 aaPredicted RBP12.11□□□□□ -0.47
SEC16A-203ENST00000313050 CCDC40Q4G0X9 1142 aa12.11□□□□□ -0.47
SEC16A-203ENST00000313050 ZHX3Q9H4I2 956 aa12.11□□□□□ -0.47
SEC16A-203ENST00000313050 COMMD10Q9Y6G5 202 aa12.11□□□□□ -0.47
SEC16A-203ENST00000313050 SMC1BQ8NDV3 1235 aa12.11□□□□□ -0.47
SEC16A-203ENST00000313050 NOL7Q9UMY1 257 aaKnown RBP12.11□□□□□ -0.47
SEC16A-203ENST00000313050 ALDH3A1P30838 453 aa12.11□□□□□ -0.47
SEC16A-203ENST00000313050 TMCO4Q5TGY1 634 aa12.11□□□□□ -0.47
SEC16A-203ENST00000313050 SPATS2Q86XZ4 545 aaKnown RBP12.11□□□□□ -0.47
SEC16A-203ENST00000313050 SATB1Q01826 763 aa12.11□□□□□ -0.47
SEC16A-203ENST00000313050 KIAA0753Q2KHM9 967 aa12.11□□□□□ -0.47
SEC16A-203ENST00000313050 INTS8Q75QN2 995 aaKnown RBP12.11□□□□□ -0.47
SEC16A-203ENST00000313050 MACROD2A1Z1Q3 448 aa12.1□□□□□ -0.47
SEC16A-203ENST00000313050 ARFGAP2Q8N6H7 521 aa12.1□□□□□ -0.47
SEC16A-203ENST00000313050 GNG11P61952 73 aa12.1□□□□□ -0.47
SEC16A-203ENST00000313050 DNA2P51530 1060 aa12.1□□□□□ -0.47
SEC16A-203ENST00000313050 STX1AQ16623 288 aa12.1□□□□□ -0.47
SEC16A-203ENST00000313050 DDX58O95786 925 aaKnown RBP12.1□□□□□ -0.47
SEC16A-203ENST00000313050 NLRP5P59047 1200 aa12.1□□□□□ -0.47
SEC16A-203ENST00000313050 CNPY4Q8N129 248 aa12.1□□□□□ -0.47
SEC16A-203ENST00000313050 PLVAPQ9BX97 442 aa12.1□□□□□ -0.47
SEC16A-203ENST00000313050 WASHC4Q2M389 1173 aa12.1□□□□□ -0.47
SEC16A-203ENST00000313050 CCDC65Q8IXS2 484 aa12.1□□□□□ -0.47
SEC16A-203ENST00000313050 SLU7O95391 586 aaKnown RBP12.09□□□□□ -0.47
SEC16A-203ENST00000313050 CSB-PGBD3P0DP91 1061 aa12.09□□□□□ -0.47
SEC16A-203ENST00000313050 NAA16Q6N069 864 aaPredicted RBP12.09□□□□□ -0.47
SEC16A-203ENST00000313050 FERMT1Q9BQL6 677 aa12.09□□□□□ -0.47
SEC16A-203ENST00000313050 NOLC1Q14978 699 aaKnown RBP eCLIP12.09□□□□□ -0.47
SEC16A-203ENST00000313050 AFAP1L1Q8TED9 768 aa12.09□□□□□ -0.47
SEC16A-203ENST00000313050 USP25Q9UHP3 1055 aa12.09□□□□□ -0.47
SEC16A-203ENST00000313050 PPP6R1Q9UPN7 881 aa12.09□□□□□ -0.47
SEC16A-203ENST00000313050 TNIKQ9UKE5 1360 aa12.09□□□□□ -0.47
SEC16A-203ENST00000313050 UVSSAQ2YD98 709 aa12.09□□□□□ -0.47
SEC16A-203ENST00000313050 NUTM1Q86Y26 1132 aa12.09□□□□□ -0.47
SEC16A-203ENST00000313050 SELENOOQ9BVL4 669 aa12.09□□□□□ -0.47
SEC16A-203ENST00000313050 VCX3AQ9NNX9 186 aa12.09□□□□□ -0.47
SEC16A-203ENST00000313050 MRFAP1Q9Y605 127 aa12.09□□□□□ -0.47
SEC16A-203ENST00000313050 THEGQ9P2T0 379 aa12.09□□□□□ -0.47
SEC16A-203ENST00000313050 CTAGE15A4D2H0 777 aa12.09□□□□□ -0.47
SEC16A-203ENST00000313050 CTAGE8P0CG41 777 aa12.09□□□□□ -0.47
SEC16A-203ENST00000313050 HS1BP3Q53T59 392 aa12.09□□□□□ -0.47
SEC16A-203ENST00000313050 CTAGE4Q8IX94 777 aa12.09□□□□□ -0.47
SEC16A-203ENST00000313050 SLMAPQ14BN4 828 aa12.08□□□□□ -0.47
SEC16A-203ENST00000313050 TMC6Q7Z403 805 aa12.08□□□□□ -0.48
SEC16A-203ENST00000313050 SEC62Q99442 399 aaKnown RBP12.08□□□□□ -0.48
SEC16A-203ENST00000313050 FAF1Q9UNN5 650 aaPredicted RBP12.08□□□□□ -0.48
SEC16A-203ENST00000313050 ATAD2Q6PL18 1390 aa12.08□□□□□ -0.48
SEC16A-203ENST00000313050 SLC8A1P32418 973 aa12.08□□□□□ -0.48
SEC16A-203ENST00000313050 PRPF4BQ13523 1007 aaKnown RBP12.08□□□□□ -0.48
SEC16A-203ENST00000313050 CCDC57Q2TAC2 916 aa12.08□□□□□ -0.48
SEC16A-203ENST00000313050 ARHGAP24Q8N264 748 aa12.08□□□□□ -0.48
SEC16A-203ENST00000313050 CCDC77Q9BR77 488 aa12.08□□□□□ -0.48
SEC16A-203ENST00000313050 SCAND2PQ9GZW5 306 aaPredicted RBP12.08□□□□□ -0.48
SEC16A-203ENST00000313050 LIMCH1Q9UPQ0 1083 aa12.08□□□□□ -0.48
SEC16A-203ENST00000313050 MATR3P43243 847 aaKnown RBP eCLIP12.08□□□□□ -0.48
SEC16A-203ENST00000313050 CCDC96Q2M329 555 aa12.08□□□□□ -0.48
SEC16A-203ENST00000313050 FSD1Q9BTV5 496 aa12.08□□□□□ -0.48
SEC16A-203ENST00000313050 ZSWIM4Q9H7M6 989 aa12.08□□□□□ -0.48
SEC16A-203ENST00000313050 TSG101Q99816 390 aa12.08□□□□□ -0.48
SEC16A-203ENST00000313050 NUCKS1Q9H1E3 243 aaKnown RBP12.08□□□□□ -0.48
SEC16A-203ENST00000313050 SMIM24O75264 130 aa12.07□□□□□ -0.48
SEC16A-203ENST00000313050 CXorf38Q8TB03 319 aa12.07□□□□□ -0.48
SEC16A-203ENST00000313050 ERCC6LQ2NKX8 1250 aa12.07□□□□□ -0.48
SEC16A-203ENST00000313050 SELENOSQ9BQE4 189 aa12.07□□□□□ -0.48
SEC16A-203ENST00000313050 IRX4P78413 519 aa12.07□□□□□ -0.48
SEC16A-203ENST00000313050 RASEFQ8IZ41 740 aa12.07□□□□□ -0.48
SEC16A-203ENST00000313050 VPS41P49754 854 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms