RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 STARD3NLO95772 234 aa16.33■□□□□ 0.2
CHMP2A-201ENST00000312547 HMGB2P26583 209 aaKnown RBP16.33■□□□□ 0.2
CHMP2A-201ENST00000312547 CNTNAP4Q9C0A0 1308 aa16.33■□□□□ 0.2
CHMP2A-201ENST00000312547 C5P01031 1676 aa16.33■□□□□ 0.2
CHMP2A-201ENST00000312547 RC3H1Q5TC82 1133 aaKnown RBP16.32■□□□□ 0.2
CHMP2A-201ENST00000312547 HDGFL1Q5TGJ6 251 aa16.32■□□□□ 0.2
CHMP2A-201ENST00000312547 INTS5Q6P9B9 1019 aaKnown RBP16.32■□□□□ 0.2
CHMP2A-201ENST00000312547 RREB1Q92766 1687 aa16.31■□□□□ 0.2
CHMP2A-201ENST00000312547 ERBB4Q15303 1308 aa16.31■□□□□ 0.2
CHMP2A-201ENST00000312547 CRKLP46109 303 aaKnown RBP16.31■□□□□ 0.2
CHMP2A-201ENST00000312547 ZNF428Q96B54 188 aa16.31■□□□□ 0.2
CHMP2A-201ENST00000312547 COL5A3P25940 1745 aaPredicted RBP16.31■□□□□ 0.2
CHMP2A-201ENST00000312547 NBPF26B4DH59 902 aa16.3■□□□□ 0.2
CHMP2A-201ENST00000312547 A1BGP04217 495 aa16.3■□□□□ 0.2
CHMP2A-201ENST00000312547 EIF2S2P20042 333 aaKnown RBP16.3■□□□□ 0.2
CHMP2A-201ENST00000312547 PDIA6Q15084 440 aa16.3■□□□□ 0.2
CHMP2A-201ENST00000312547 NBPF14Q5TI25 921 aa16.3■□□□□ 0.2
CHMP2A-201ENST00000312547 NBPF10Q6P3W6 841 aaKnown RBP16.3■□□□□ 0.2
CHMP2A-201ENST00000312547 NBPF15Q8N660 670 aa16.3■□□□□ 0.2
CHMP2A-201ENST00000312547 CHMP4AQ9BY43 222 aa16.3■□□□□ 0.2
CHMP2A-201ENST00000312547 CCDC87Q9NVE4 849 aa16.3■□□□□ 0.2
CHMP2A-201ENST00000312547 ZBTB1Q9Y2K1 713 aa16.3■□□□□ 0.2
CHMP2A-201ENST00000312547 LAMB4A4D0S4 1761 aa16.3■□□□□ 0.2
CHMP2A-201ENST00000312547 CCDC30Q5VVM6 783 aa16.29■□□□□ 0.2
CHMP2A-201ENST00000312547 LRP10Q7Z4F1 713 aa16.29■□□□□ 0.2
CHMP2A-201ENST00000312547 AKT1S1Q96B36 256 aa16.29■□□□□ 0.2
CHMP2A-201ENST00000312547 C4BP0C0L5 1744 aa16.28■□□□□ 0.2
CHMP2A-201ENST00000312547 ZNF827Q17R98 1081 aa16.28■□□□□ 0.2
CHMP2A-201ENST00000312547 NECTIN2Q92692 538 aa16.28■□□□□ 0.2
CHMP2A-201ENST00000312547 CHPF2Q9P2E5 772 aa16.28■□□□□ 0.2
CHMP2A-201ENST00000312547 TAF1LQ8IZX4 1826 aa16.27■□□□□ 0.2
CHMP2A-201ENST00000312547 RPS6KA4O75676 772 aa16.27■□□□□ 0.2
CHMP2A-201ENST00000312547 RARSP54136 660 aaKnown RBP16.27■□□□□ 0.2
CHMP2A-201ENST00000312547 PROSER3Q2NL68 480 aa16.27■□□□□ 0.2
CHMP2A-201ENST00000312547 SSH1Q8WYL5 1049 aa16.27■□□□□ 0.2
CHMP2A-201ENST00000312547 ANO8Q9HCE9 1232 aaPredicted RBP16.27■□□□□ 0.2
CHMP2A-201ENST00000312547 DDX21Q9NR30 783 aaKnown RBP eCLIP16.27■□□□□ 0.2
CHMP2A-201ENST00000312547 DBF4Q9UBU7 674 aaPredicted RBP16.27■□□□□ 0.2
CHMP2A-201ENST00000312547 NUP188Q5SRE5 1749 aa16.26■□□□□ 0.19
CHMP2A-201ENST00000312547 PSDA5PKW4 1024 aaPredicted RBP16.26■□□□□ 0.19
CHMP2A-201ENST00000312547 IL6STP40189 918 aaPredicted RBP16.26■□□□□ 0.19
CHMP2A-201ENST00000312547 PIP4K2AP48426 406 aaPredicted RBP16.26■□□□□ 0.19
CHMP2A-201ENST00000312547 EIF5P55010 431 aaKnown RBP16.26■□□□□ 0.19
CHMP2A-201ENST00000312547 ALDH1L2Q3SY69 923 aa16.26■□□□□ 0.19
CHMP2A-201ENST00000312547 AMIGO3Q86WK7 504 aa16.26■□□□□ 0.19
CHMP2A-201ENST00000312547 TCERG1O14776 1098 aaKnown RBP16.25■□□□□ 0.19
CHMP2A-201ENST00000312547 GNPATO15228 680 aa16.25■□□□□ 0.19
CHMP2A-201ENST00000312547 ANXA1P04083 346 aa16.25■□□□□ 0.19
CHMP2A-201ENST00000312547 CANXP27824 592 aaKnown RBP16.25■□□□□ 0.19
CHMP2A-201ENST00000312547 AK7Q96M32 723 aa16.25■□□□□ 0.19
CHMP2A-201ENST00000312547 MYH14Q7Z406 1995 aaKnown RBP16.24■□□□□ 0.19
CHMP2A-201ENST00000312547 BRPF1P55201 1214 aaPredicted RBP16.24■□□□□ 0.19
CHMP2A-201ENST00000312547 SLC15A2Q16348 729 aa16.24■□□□□ 0.19
CHMP2A-201ENST00000312547 MRPL50Q8N5N7 158 aaKnown RBP16.24■□□□□ 0.19
CHMP2A-201ENST00000312547 STK31Q9BXU1 1019 aa16.24■□□□□ 0.19
CHMP2A-201ENST00000312547 HYPKQ9NX55 129 aa16.24■□□□□ 0.19
CHMP2A-201ENST00000312547 SLC4A2P04920 1241 aa16.23■□□□□ 0.19
CHMP2A-201ENST00000312547 STK32BQ9NY57 414 aa16.23■□□□□ 0.19
CHMP2A-201ENST00000312547 RTCBQ9Y3I0 505 aaKnown RBP16.23■□□□□ 0.19
CHMP2A-201ENST00000312547 MYL6BP14649 208 aa16.22■□□□□ 0.19
CHMP2A-201ENST00000312547 ADRA2BP18089 450 aa16.22■□□□□ 0.19
CHMP2A-201ENST00000312547 SSFA2P28290 1259 aa16.22■□□□□ 0.19
CHMP2A-201ENST00000312547 RCAN3Q9UKA8 241 aa16.22■□□□□ 0.19
CHMP2A-201ENST00000312547 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.21■□□□□ 0.19
CHMP2A-201ENST00000312547 SMIM5Q71RC9 77 aa16.21■□□□□ 0.19
CHMP2A-201ENST00000312547 G2E3Q7L622 706 aa16.21■□□□□ 0.19
CHMP2A-201ENST00000312547 XAGE3Q8WTP9 111 aa16.21■□□□□ 0.19
CHMP2A-201ENST00000312547 BCL2L13Q9BXK5 485 aa16.21■□□□□ 0.19
CHMP2A-201ENST00000312547 PHAXQ9H814 394 aaKnown RBP16.21■□□□□ 0.19
CHMP2A-201ENST00000312547 SMC4Q9NTJ3 1288 aa16.21■□□□□ 0.19
CHMP2A-201ENST00000312547 COL15A1P39059 1388 aa16.21■□□□□ 0.19
CHMP2A-201ENST00000312547 BCAR3O75815 825 aa16.2■□□□□ 0.18
CHMP2A-201ENST00000312547 COPS6Q7L5N1 327 aa16.2■□□□□ 0.18
CHMP2A-201ENST00000312547 ARHGEF1Q92888 912 aaKnown RBP16.2■□□□□ 0.18
CHMP2A-201ENST00000312547 TFCP2L1Q9NZI6 479 aa16.2■□□□□ 0.18
CHMP2A-201ENST00000312547 PNPLA7Q6ZV29 1317 aa16.19■□□□□ 0.18
CHMP2A-201ENST00000312547 UBR3Q6ZT12 1888 aa16.19■□□□□ 0.18
CHMP2A-201ENST00000312547 A0A087WZG4 1122 aa16.19■□□□□ 0.18
CHMP2A-201ENST00000312547 FLIIQ13045 1269 aa16.19■□□□□ 0.18
CHMP2A-201ENST00000312547 TRAPPC3LQ5T215 181 aa16.19■□□□□ 0.18
CHMP2A-201ENST00000312547 TTLL7Q6ZT98 887 aa16.19■□□□□ 0.18
CHMP2A-201ENST00000312547 FLAD1Q8NFF5 587 aa16.19■□□□□ 0.18
CHMP2A-201ENST00000312547 PHF14O94880 888 aa16.18■□□□□ 0.18
CHMP2A-201ENST00000312547 COL23A1Q86Y22 540 aaPredicted RBP16.18■□□□□ 0.18
CHMP2A-201ENST00000312547 ZNF330Q9Y3S2 320 aaPredicted RBP16.18■□□□□ 0.18
CHMP2A-201ENST00000312547 RGL2O15211 777 aa16.17■□□□□ 0.18
CHMP2A-201ENST00000312547 CAMTA2O94983 1202 aa16.17■□□□□ 0.18
CHMP2A-201ENST00000312547 DZIP3Q86Y13 1208 aaKnown RBP16.17■□□□□ 0.18
CHMP2A-201ENST00000312547 NARFQ9UHQ1 456 aa16.17■□□□□ 0.18
CHMP2A-201ENST00000312547 TBC1D2BQ9UPU7 963 aa16.17■□□□□ 0.18
CHMP2A-201ENST00000312547 KIF16BQ96L93 1317 aa16.17■□□□□ 0.18
CHMP2A-201ENST00000312547 USP42Q9H9J4 1324 aaKnown RBP16.17■□□□□ 0.18
CHMP2A-201ENST00000312547 ERVV-1B6SEH8 477 aa16.16■□□□□ 0.18
CHMP2A-201ENST00000312547 AIMP1Q12904 312 aaKnown RBP16.16■□□□□ 0.18
CHMP2A-201ENST00000312547 NPM2Q86SE8 214 aaKnown RBP16.16■□□□□ 0.18
CHMP2A-201ENST00000312547 PTPRCP08575 1304 aa16.16■□□□□ 0.18
CHMP2A-201ENST00000312547 MAP3K15Q6ZN16 1313 aa16.16■□□□□ 0.18
CHMP2A-201ENST00000312547 RFC4P35249 363 aa16.15■□□□□ 0.18
CHMP2A-201ENST00000312547 R3HDM1Q15032 1099 aaKnown RBP16.15■□□□□ 0.18
CHMP2A-201ENST00000312547 QSER1Q2KHR3 1735 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms