RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 MYL6BP14649 208 aa15.3■□□□□ 0.04
SNED1-201ENST00000310397 CABP4P57796 275 aa15.3■□□□□ 0.04
SNED1-201ENST00000310397 EVI5LQ96CN4 794 aa15.3■□□□□ 0.04
SNED1-201ENST00000310397 SOGA3Q5TF21 947 aa15.3■□□□□ 0.04
SNED1-201ENST00000310397 MICALCLQ6ZW33 695 aa15.3■□□□□ 0.04
SNED1-201ENST00000310397 CEP135Q66GS9 1140 aa15.3■□□□□ 0.04
SNED1-201ENST00000310397 LARP1Q6PKG0 1096 aaKnown RBP15.3■□□□□ 0.04
SNED1-201ENST00000310397 MTMR7Q9Y216 660 aa15.3■□□□□ 0.04
SNED1-201ENST00000310397 KRT222Q8N1A0 295 aa15.3■□□□□ 0.04
SNED1-201ENST00000310397 ZKSCAN5Q9Y2L8 839 aa15.3■□□□□ 0.04
SNED1-201ENST00000310397 KIF21AQ7Z4S6 1674 aa15.3■□□□□ 0.04
SNED1-201ENST00000310397 CKAP2LQ8IYA6 745 aa15.3■□□□□ 0.04
SNED1-201ENST00000310397 ZMYND15Q9H091 742 aa15.3■□□□□ 0.04
SNED1-201ENST00000310397 HMG20BQ9P0W2 317 aa15.3■□□□□ 0.04
SNED1-201ENST00000310397 FGFR1OPO95684 399 aaKnown RBP15.29■□□□□ 0.04
SNED1-201ENST00000310397 PEG3Q9GZU2 1588 aa15.29■□□□□ 0.04
SNED1-201ENST00000310397 FAM69CQ0P6D2 419 aa15.29■□□□□ 0.04
SNED1-201ENST00000310397 TAF7Q15545 349 aaPredicted RBP15.29■□□□□ 0.04
SNED1-201ENST00000310397 TIGD1Q96MW7 591 aa15.29■□□□□ 0.04
SNED1-201ENST00000310397 TUBB4AP04350 444 aa15.28■□□□□ 0.04
SNED1-201ENST00000310397 C8orf34Q49A92 452 aa15.28■□□□□ 0.04
SNED1-201ENST00000310397 ESCO1Q5FWF5 840 aa15.28■□□□□ 0.04
SNED1-201ENST00000310397 GJB2P29033 226 aa15.28■□□□□ 0.04
SNED1-201ENST00000310397 GBP2P32456 591 aaPredicted RBP15.28■□□□□ 0.04
SNED1-201ENST00000310397 CYB5RLQ6IPT4 315 aa15.28■□□□□ 0.04
SNED1-201ENST00000310397 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.28■□□□□ 0.04
SNED1-201ENST00000310397 GIMAP7Q8NHV1 300 aa15.28■□□□□ 0.04
SNED1-201ENST00000310397 FKBP15Q5T1M5 1219 aa15.27■□□□□ 0.04
SNED1-201ENST00000310397 FSIP1Q8NA03 581 aa15.27■□□□□ 0.04
SNED1-201ENST00000310397 PARD3Q8TEW0 1356 aa15.27■□□□□ 0.04
SNED1-201ENST00000310397 TAX1BP1Q86VP1 789 aa15.27■□□□□ 0.04
SNED1-201ENST00000310397 TRMT1Q9NXH9 659 aaKnown RBP15.27■□□□□ 0.04
SNED1-201ENST00000310397 NOLC1Q14978 699 aaKnown RBP eCLIP15.27■□□□□ 0.04
SNED1-201ENST00000310397 UGGT2Q9NYU1 1516 aa15.27■□□□□ 0.03
SNED1-201ENST00000310397 HCLS1P14317 486 aaPredicted RBP15.27■□□□□ 0.03
SNED1-201ENST00000310397 PAFAH1B1P43034 410 aa15.27■□□□□ 0.03
SNED1-201ENST00000310397 USO1O60763 962 aaKnown RBP15.27■□□□□ 0.03
SNED1-201ENST00000310397 CNNM3Q8NE01 707 aa15.27■□□□□ 0.03
SNED1-201ENST00000310397 TUBB4BP68371 445 aa15.26■□□□□ 0.03
SNED1-201ENST00000310397 KANK3Q6NY19 840 aa15.26■□□□□ 0.03
SNED1-201ENST00000310397 THUMPD2Q9BTF0 503 aaKnown RBP15.26■□□□□ 0.03
SNED1-201ENST00000310397 ZSCAN22P10073 491 aaPredicted RBP15.26■□□□□ 0.03
SNED1-201ENST00000310397 AIDAQ96BJ3 306 aa15.26■□□□□ 0.03
SNED1-201ENST00000310397 SLC26A8Q96RN1 970 aa15.26■□□□□ 0.03
SNED1-201ENST00000310397 BOLA2Q9H3K6 86 aa15.26■□□□□ 0.03
SNED1-201ENST00000310397 NUP160Q12769 1436 aa15.26■□□□□ 0.03
SNED1-201ENST00000310397 POLR3GO15318 223 aaPredicted RBP15.26■□□□□ 0.03
SNED1-201ENST00000310397 NUDT16Q96DE0 195 aaKnown RBP15.26■□□□□ 0.03
SNED1-201ENST00000310397 MCM10Q7L590 875 aa15.26■□□□□ 0.03
SNED1-201ENST00000310397 EZRP15311 586 aaKnown RBP15.26■□□□□ 0.03
SNED1-201ENST00000310397 PYM1Q9BRP8 204 aaKnown RBP15.26■□□□□ 0.03
SNED1-201ENST00000310397 GDPD2Q9HCC8 539 aa15.26■□□□□ 0.03
SNED1-201ENST00000310397 DISP3Q9P2K9 1392 aa15.26■□□□□ 0.03
SNED1-201ENST00000310397 VPS36Q86VN1 386 aa15.25■□□□□ 0.03
SNED1-201ENST00000310397 RAB3GAP1Q15042 981 aa15.25■□□□□ 0.03
SNED1-201ENST00000310397 TMX3Q96JJ7 454 aa15.25■□□□□ 0.03
SNED1-201ENST00000310397 PLCD4Q9BRC7 762 aa15.25■□□□□ 0.03
SNED1-201ENST00000310397 RBM27Q9P2N5 1060 aaKnown RBP15.25■□□□□ 0.03
SNED1-201ENST00000310397 PPP1R12BO60237 982 aaPredicted RBP15.25■□□□□ 0.03
SNED1-201ENST00000310397 ARFGAP3Q9NP61 516 aa15.25■□□□□ 0.03
SNED1-201ENST00000310397 NAA15Q9BXJ9 866 aaKnown RBP15.25■□□□□ 0.03
SNED1-201ENST00000310397 TMC6Q7Z403 805 aa15.25■□□□□ 0.03
SNED1-201ENST00000310397 SMC5Q8IY18 1101 aa15.25■□□□□ 0.03
SNED1-201ENST00000310397 FAM200AQ8TCP9 573 aa15.25■□□□□ 0.03
SNED1-201ENST00000310397 ZHX3Q9H4I2 956 aa15.25■□□□□ 0.03
SNED1-201ENST00000310397 THEMISQ8N1K5 641 aaPredicted RBP15.24■□□□□ 0.03
SNED1-201ENST00000310397 ZNF287Q9HBT7 754 aa15.24■□□□□ 0.03
SNED1-201ENST00000310397 RAPGEF6Q8TEU7 1601 aa15.24■□□□□ 0.03
SNED1-201ENST00000310397 ECHDC1Q9NTX5 307 aa15.24■□□□□ 0.03
SNED1-201ENST00000310397 YEATS4O95619 227 aa15.24■□□□□ 0.03
SNED1-201ENST00000310397 GTPBP4Q9BZE4 634 aaKnown RBP15.24■□□□□ 0.03
SNED1-201ENST00000310397 HYPKQ9NX55 129 aa15.24■□□□□ 0.03
SNED1-201ENST00000310397 PCDHB15Q9Y5E8 787 aa15.24■□□□□ 0.03
SNED1-201ENST00000310397 KLHL10Q6JEL2 608 aa15.24■□□□□ 0.03
SNED1-201ENST00000310397 NUP88Q99567 741 aaPredicted RBP15.24■□□□□ 0.03
SNED1-201ENST00000310397 ANKRD36BQ8N2N9 1353 aa15.24■□□□□ 0.03
SNED1-201ENST00000310397 TTC21BQ7Z4L5 1316 aa15.24■□□□□ 0.03
SNED1-201ENST00000310397 EHBP1Q8NDI1 1231 aa15.23■□□□□ 0.03
SNED1-201ENST00000310397 KCNH5Q8NCM2 988 aa15.23■□□□□ 0.03
SNED1-201ENST00000310397 SRRTQ9BXP5 876 aaKnown RBP15.23■□□□□ 0.03
SNED1-201ENST00000310397 PANK2Q9BZ23 570 aa15.23■□□□□ 0.03
SNED1-201ENST00000310397 AMOTQ4VCS5 1084 aa15.23■□□□□ 0.03
SNED1-201ENST00000310397 SMARCC1Q92922 1105 aaPredicted RBP15.23■□□□□ 0.03
SNED1-201ENST00000310397 RBM25P49756 843 aaKnown RBP15.23■□□□□ 0.03
SNED1-201ENST00000310397 LRP2BPQ9P2M1 347 aa15.23■□□□□ 0.03
SNED1-201ENST00000310397 IVLP07476 585 aa15.23■□□□□ 0.03
SNED1-201ENST00000310397 FLIIQ13045 1269 aa15.23■□□□□ 0.03
SNED1-201ENST00000310397 ZHX1Q9UKY1 873 aaPredicted RBP15.23■□□□□ 0.03
SNED1-201ENST00000310397 IDH1O75874 414 aaKnown RBP15.22■□□□□ 0.03
SNED1-201ENST00000310397 LUZP1Q86V48 1076 aa15.22■□□□□ 0.03
SNED1-201ENST00000310397 RAI14Q9P0K7 980 aa15.22■□□□□ 0.03
SNED1-201ENST00000310397 ARHGEF12Q9NZN5 1544 aa15.22■□□□□ 0.03
SNED1-201ENST00000310397 DNAAF4Q8WXU2 420 aa15.22■□□□□ 0.03
SNED1-201ENST00000310397 SDSP20132 328 aa15.22■□□□□ 0.03
SNED1-201ENST00000310397 RAB34Q9BZG1 259 aa15.22■□□□□ 0.03
SNED1-201ENST00000310397 NAPBQ9H115 298 aa15.22■□□□□ 0.03
SNED1-201ENST00000310397 ZNF213O14771 459 aa15.22■□□□□ 0.03
SNED1-201ENST00000310397 CACNA2D4Q7Z3S7 1137 aa15.22■□□□□ 0.03
SNED1-201ENST00000310397 DYDC1Q8WWB3 177 aa15.22■□□□□ 0.03
SNED1-201ENST00000310397 DBF4Q9UBU7 674 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms