RNA–Protein interactions for RNA: ENST00000309859.8

GGA2-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA2, Length 5,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-201ENST00000309859 FKBP15Q5T1M5 1219 aa12.67□□□□□ -0.38
GGA2-201ENST00000309859 CCAR1Q8IX12 1150 aaKnown RBP12.67□□□□□ -0.38
GGA2-201ENST00000309859 CTR9Q6PD62 1173 aa12.67□□□□□ -0.38
GGA2-201ENST00000309859 RASSF8Q8NHQ8 419 aa12.67□□□□□ -0.38
GGA2-201ENST00000309859 GDAP1L1Q96MZ0 367 aa12.67□□□□□ -0.38
GGA2-201ENST00000309859 EPC1Q9H2F5 836 aa12.67□□□□□ -0.38
GGA2-201ENST00000309859 SHTN1A0MZ66 631 aa12.66□□□□□ -0.38
GGA2-201ENST00000309859 CPLX1O14810 134 aa12.66□□□□□ -0.38
GGA2-201ENST00000309859 CLGNO14967 610 aa12.66□□□□□ -0.38
GGA2-201ENST00000309859 LMOD1P29536 600 aaPredicted RBP12.66□□□□□ -0.38
GGA2-201ENST00000309859 MAP2K2P36507 400 aa12.66□□□□□ -0.38
GGA2-201ENST00000309859 MEIS3Q99687 375 aa12.66□□□□□ -0.38
GGA2-201ENST00000309859 PALD1Q9ULE6 856 aa12.66□□□□□ -0.38
GGA2-201ENST00000309859 TSR1Q2NL82 804 aaKnown RBP12.66□□□□□ -0.38
GGA2-201ENST00000309859 CRACR2AQ9BSW2 395 aa12.66□□□□□ -0.38
GGA2-201ENST00000309859 SLFN14P0C7P3 912 aa12.66□□□□□ -0.38
GGA2-201ENST00000309859 TOP1P11387 765 aaKnown RBP12.66□□□□□ -0.38
GGA2-201ENST00000309859 FSIP1Q8NA03 581 aa12.66□□□□□ -0.38
GGA2-201ENST00000309859 ESYT1Q9BSJ8 1104 aa12.66□□□□□ -0.38
GGA2-201ENST00000309859 ANO10Q9NW15 660 aa12.66□□□□□ -0.38
GGA2-201ENST00000309859 PRDM2Q13029 1718 aa12.66□□□□□ -0.38
GGA2-201ENST00000309859 BRD1O95696 1058 aa12.66□□□□□ -0.38
GGA2-201ENST00000309859 UTP14AQ9BVJ6 771 aaKnown RBP12.66□□□□□ -0.38
GGA2-201ENST00000309859 RAB11FIP3O75154 756 aa12.66□□□□□ -0.38
GGA2-201ENST00000309859 NF2P35240 595 aa12.66□□□□□ -0.38
GGA2-201ENST00000309859 IFNKQ9P0W0 207 aa12.66□□□□□ -0.38
GGA2-201ENST00000309859 EVC2Q86UK5 1308 aa12.65□□□□□ -0.38
GGA2-201ENST00000309859 CACTINQ8WUQ7 758 aaKnown RBP12.65□□□□□ -0.38
GGA2-201ENST00000309859 JRKLQ9Y4A0 524 aa12.65□□□□□ -0.38
GGA2-201ENST00000309859 LIG3P49916 1009 aa12.65□□□□□ -0.38
GGA2-201ENST00000309859 STX1AQ16623 288 aa12.65□□□□□ -0.38
GGA2-201ENST00000309859 RALGAPBQ86X10 1494 aa12.65□□□□□ -0.38
GGA2-201ENST00000309859 KIF21AQ7Z4S6 1674 aa12.65□□□□□ -0.38
GGA2-201ENST00000309859 PRG4Q92954 1404 aaPredicted RBP12.65□□□□□ -0.38
GGA2-201ENST00000309859 USP27XA6NNY8 438 aa12.65□□□□□ -0.38
GGA2-201ENST00000309859 DDX19AQ9NUU7 478 aaKnown RBP12.65□□□□□ -0.38
GGA2-201ENST00000309859 BLOC1S2Q6QNY1 142 aa12.65□□□□□ -0.38
GGA2-201ENST00000309859 KCNF1Q9H3M0 494 aa12.65□□□□□ -0.38
GGA2-201ENST00000309859 EFCAB5A4FU69 1503 aa12.65□□□□□ -0.39
GGA2-201ENST00000309859 NEBLO76041 1014 aa12.65□□□□□ -0.39
GGA2-201ENST00000309859 GBP6Q6ZN66 633 aa12.65□□□□□ -0.39
GGA2-201ENST00000309859 PDS5BQ9NTI5 1447 aa12.65□□□□□ -0.39
GGA2-201ENST00000309859 NEMFO60524 1076 aa12.64□□□□□ -0.39
GGA2-201ENST00000309859 SCAND2PQ9GZW5 306 aaPredicted RBP12.64□□□□□ -0.39
GGA2-201ENST00000309859 CLCN6P51797 869 aa12.64□□□□□ -0.39
GGA2-201ENST00000309859 LRRC2Q9BYS8 371 aa12.64□□□□□ -0.39
GGA2-201ENST00000309859 LZTFL1Q9NQ48 299 aa12.64□□□□□ -0.39
GGA2-201ENST00000309859 PPP6R1Q9UPN7 881 aa12.64□□□□□ -0.39
GGA2-201ENST00000309859 KANK1Q14678 1352 aa12.64□□□□□ -0.39
GGA2-201ENST00000309859 PSMA5P28066 241 aa12.64□□□□□ -0.39
GGA2-201ENST00000309859 FEZ2Q9UHY8 353 aaPredicted RBP12.64□□□□□ -0.39
GGA2-201ENST00000309859 PDE1AP54750 535 aa12.63□□□□□ -0.39
GGA2-201ENST00000309859 C9orf78Q9NZ63 289 aaPredicted RBP12.63□□□□□ -0.39
GGA2-201ENST00000309859 DNA2P51530 1060 aa12.63□□□□□ -0.39
GGA2-201ENST00000309859 KRT24Q2M2I5 525 aa12.63□□□□□ -0.39
GGA2-201ENST00000309859 SMARCE1Q969G3 411 aa12.63□□□□□ -0.39
GGA2-201ENST00000309859 CARD14Q9BXL6 1004 aa12.63□□□□□ -0.39
GGA2-201ENST00000309859 IBTKQ9P2D0 1353 aaPredicted RBP12.63□□□□□ -0.39
GGA2-201ENST00000309859 BRD2P25440 801 aaKnown RBP12.63□□□□□ -0.39
GGA2-201ENST00000309859 GSDMDP57764 484 aa12.63□□□□□ -0.39
GGA2-201ENST00000309859 HINFPQ9BQA5 517 aa12.63□□□□□ -0.39
GGA2-201ENST00000309859 ZDHHC9Q9Y397 364 aa12.63□□□□□ -0.39
GGA2-201ENST00000309859 ZSCAN12O43309 604 aa12.63□□□□□ -0.39
GGA2-201ENST00000309859 CCT2P78371 535 aaKnown RBP12.63□□□□□ -0.39
GGA2-201ENST00000309859 PPP2R5AQ15172 486 aa12.63□□□□□ -0.39
GGA2-201ENST00000309859 RAB11FIP4Q86YS3 637 aa12.63□□□□□ -0.39
GGA2-201ENST00000309859 RPAP2Q8IXW5 612 aaPredicted RBP12.63□□□□□ -0.39
GGA2-201ENST00000309859 SCLT1Q96NL6 688 aa12.63□□□□□ -0.39
GGA2-201ENST00000309859 ST5P78524 1137 aa12.63□□□□□ -0.39
GGA2-201ENST00000309859 PPP2R3AQ06190 1150 aa12.63□□□□□ -0.39
GGA2-201ENST00000309859 SF3A3Q12874 501 aaKnown RBP eCLIP12.63□□□□□ -0.392e-6■■■□□ 17.6
GGA2-201ENST00000309859 MCM10Q7L590 875 aa12.63□□□□□ -0.39
GGA2-201ENST00000309859 KIF2CQ99661 725 aa12.63□□□□□ -0.39
GGA2-201ENST00000309859 KDM6BO15054 1643 aa12.63□□□□□ -0.39
GGA2-201ENST00000309859 ICE2Q659A1 982 aa12.62□□□□□ -0.39
GGA2-201ENST00000309859 KLHL10Q6JEL2 608 aa12.62□□□□□ -0.39
GGA2-201ENST00000309859 SCAPERQ9BY12 1400 aa12.62□□□□□ -0.39
GGA2-201ENST00000309859 PPFIBP1Q86W92 1011 aa12.62□□□□□ -0.39
GGA2-201ENST00000309859 RAD50Q92878 1312 aa12.62□□□□□ -0.39
GGA2-201ENST00000309859 ZBTB7BO15156 539 aaPredicted RBP12.62□□□□□ -0.39
GGA2-201ENST00000309859 GOLGA8FQ08AF8 430 aa12.62□□□□□ -0.39
GGA2-201ENST00000309859 GOLGA8DPQ0D2H9 430 aa12.62□□□□□ -0.39
GGA2-201ENST00000309859 TEX2Q8IWB9 1127 aa12.62□□□□□ -0.39
GGA2-201ENST00000309859 CFAP45Q9UL16 551 aa12.62□□□□□ -0.39
GGA2-201ENST00000309859 ANKRD36BQ8N2N9 1353 aa12.62□□□□□ -0.39
GGA2-201ENST00000309859 IPO7O95373 1038 aaKnown RBP12.61□□□□□ -0.39
GGA2-201ENST00000309859 MATR3P43243 847 aaKnown RBP eCLIP12.61□□□□□ -0.39
GGA2-201ENST00000309859 GBP2P32456 591 aaPredicted RBP12.61□□□□□ -0.39
GGA2-201ENST00000309859 HOOK1Q9UJC3 728 aaKnown RBP12.61□□□□□ -0.39
GGA2-201ENST00000309859 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.61□□□□□ -0.399e-8■■■■■ 28.9
GGA2-201ENST00000309859 AK9Q5TCS8 1911 aa12.61□□□□□ -0.39
GGA2-201ENST00000309859 ZNF521Q96K83 1311 aa12.61□□□□□ -0.39
GGA2-201ENST00000309859 NAA25Q14CX7 972 aa12.61□□□□□ -0.39
GGA2-201ENST00000309859 PPM1EQ8WY54 764 aa12.61□□□□□ -0.39
GGA2-201ENST00000309859 POLR3DP05423 398 aaPredicted RBP12.61□□□□□ -0.39
GGA2-201ENST00000309859 TEFQ10587 303 aa12.61□□□□□ -0.39
GGA2-201ENST00000309859 TTC19Q6DKK2 380 aaPredicted RBP12.61□□□□□ -0.39
GGA2-201ENST00000309859 ZNF396Q96N95 335 aaPredicted RBP12.61□□□□□ -0.39
GGA2-201ENST00000309859 DHX16O60231 1041 aaKnown RBP12.6□□□□□ -0.39
GGA2-201ENST00000309859 ZEB2O60315 1214 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms