RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 DZIP1LQ8IYY4 767 aaKnown RBP8.9□□□□□ -0.98
PTCD2-201ENST00000308077 NFATC2IPQ8NCF5 419 aa8.9□□□□□ -0.98
PTCD2-201ENST00000308077 DDX54Q8TDD1 881 aaKnown RBP8.9□□□□□ -0.98
PTCD2-201ENST00000308077 HEG1Q9ULI3 1381 aa8.9□□□□□ -0.98
PTCD2-201ENST00000308077 SPATA31A5Q5VU36 1347 aa8.9□□□□□ -0.98
PTCD2-201ENST00000308077 SPATA31A7Q8IWB4 1347 aa8.9□□□□□ -0.98
PTCD2-201ENST00000308077 NPM3O75607 178 aaKnown RBP8.9□□□□□ -0.98
PTCD2-201ENST00000308077 GCC1Q96CN9 775 aa8.9□□□□□ -0.98
PTCD2-201ENST00000308077 SYT17Q9BSW7 474 aa8.9□□□□□ -0.98
PTCD2-201ENST00000308077 CACNA1FO60840 1977 aa8.9□□□□□ -0.99
PTCD2-201ENST00000308077 SOS1Q07889 1333 aaPredicted RBP8.9□□□□□ -0.99
PTCD2-201ENST00000308077 PDE4DIPQ5VU43 2346 aa8.9□□□□□ -0.99
PTCD2-201ENST00000308077 UBR2Q8IWV8 1755 aa8.89□□□□□ -0.99
PTCD2-201ENST00000308077 SLC39A6Q13433 755 aa8.89□□□□□ -0.99
PTCD2-201ENST00000308077 ARHGAP45Q92619 1136 aa8.89□□□□□ -0.99
PTCD2-201ENST00000308077 CCDC136Q96JN2 1154 aa8.89□□□□□ -0.99
PTCD2-201ENST00000308077 ITGB4P16144 1822 aa8.89□□□□□ -0.99
PTCD2-201ENST00000308077 NUP188Q5SRE5 1749 aa8.89□□□□□ -0.99
PTCD2-201ENST00000308077 IPO8O15397 1037 aaKnown RBP8.89□□□□□ -0.99
PTCD2-201ENST00000308077 MVPQ14764 893 aaKnown RBP8.89□□□□□ -0.99
PTCD2-201ENST00000308077 ZNF790Q6PG37 636 aa8.89□□□□□ -0.99
PTCD2-201ENST00000308077 UNC5CLQ8IV45 518 aa8.89□□□□□ -0.99
PTCD2-201ENST00000308077 FTSJ3Q8IY81 847 aaKnown RBP8.89□□□□□ -0.99
PTCD2-201ENST00000308077 NECTIN2Q92692 538 aa8.89□□□□□ -0.99
PTCD2-201ENST00000308077 GJD4Q96KN9 370 aaPredicted RBP8.89□□□□□ -0.99
PTCD2-201ENST00000308077 THRAP3Q9Y2W1 955 aaKnown RBP8.89□□□□□ -0.99
PTCD2-201ENST00000308077 ZBTB22O15209 634 aa8.88□□□□□ -0.99
PTCD2-201ENST00000308077 SLC4A2P04920 1241 aa8.88□□□□□ -0.99
PTCD2-201ENST00000308077 G2E3Q7L622 706 aa8.88□□□□□ -0.99
PTCD2-201ENST00000308077 TMEM57Q8N5G2 664 aa8.88□□□□□ -0.99
PTCD2-201ENST00000308077 ABCC4O15439 1325 aa8.88□□□□□ -0.99
PTCD2-201ENST00000308077 CASZ1Q86V15 1759 aa8.88□□□□□ -0.99
PTCD2-201ENST00000308077 PRAMEF22A3QJZ6 481 aa8.88□□□□□ -0.99
PTCD2-201ENST00000308077 HOXB7P09629 217 aa8.88□□□□□ -0.99
PTCD2-201ENST00000308077 MS4A1P11836 297 aa8.88□□□□□ -0.99
PTCD2-201ENST00000308077 CABP4P57796 275 aa8.88□□□□□ -0.99
PTCD2-201ENST00000308077 CCDC30Q5VVM6 783 aa8.88□□□□□ -0.99
PTCD2-201ENST00000308077 DOT1LQ8TEK3 1739 aa8.87□□□□□ -0.99
PTCD2-201ENST00000308077 ERVV-2B6SEH9 535 aa8.87□□□□□ -0.99
PTCD2-201ENST00000308077 VPS72Q15906 364 aa8.87□□□□□ -0.99
PTCD2-201ENST00000308077 HDGFL1Q5TGJ6 251 aa8.87□□□□□ -0.99
PTCD2-201ENST00000308077 NBPF14Q5TI25 921 aa8.87□□□□□ -0.99
PTCD2-201ENST00000308077 BARGINQ6ZT62 677 aa8.87□□□□□ -0.99
PTCD2-201ENST00000308077 LAMB4A4D0S4 1761 aa8.87□□□□□ -0.99
PTCD2-201ENST00000308077 KCPQ6ZWJ8 1503 aa8.87□□□□□ -0.99
PTCD2-201ENST00000308077 EXOC5O00471 708 aa8.86□□□□□ -0.99
PTCD2-201ENST00000308077 ITPRIPQ8IWB1 547 aa8.86□□□□□ -0.99
PTCD2-201ENST00000308077 ZNF496Q96IT1 587 aaPredicted RBP8.86□□□□□ -0.99
PTCD2-201ENST00000308077 CDCA7Q9BWT1 371 aaPredicted RBP8.86□□□□□ -0.99
PTCD2-201ENST00000308077 CCDC9Q9Y3X0 531 aaKnown RBP8.86□□□□□ -0.99
PTCD2-201ENST00000308077 PTPRCP08575 1304 aa8.86□□□□□ -0.99
PTCD2-201ENST00000308077 N4BP2Q86UW6 1770 aaPredicted RBP8.86□□□□□ -0.99
PTCD2-201ENST00000308077 EIF2S2P20042 333 aaKnown RBP8.86□□□□□ -0.99
PTCD2-201ENST00000308077 STK31Q9BXU1 1019 aa8.86□□□□□ -0.99
PTCD2-201ENST00000308077 API5Q9BZZ5 524 aaKnown RBP8.86□□□□□ -0.99
PTCD2-201ENST00000308077 ADCY9O60503 1353 aa8.85□□□□□ -0.99
PTCD2-201ENST00000308077 THSD7AQ9UPZ6 1657 aa8.85□□□□□ -0.99
PTCD2-201ENST00000308077 CHPF2Q9P2E5 772 aa8.85□□□□□ -0.99
PTCD2-201ENST00000308077 FLIIQ13045 1269 aa8.85□□□□□ -0.99
PTCD2-201ENST00000308077 DDB1Q16531 1140 aa8.85□□□□□ -0.99
PTCD2-201ENST00000308077 TTC5Q8N0Z6 440 aa8.85□□□□□ -0.99
PTCD2-201ENST00000308077 PHAXQ9H814 394 aaKnown RBP8.85□□□□□ -0.99
PTCD2-201ENST00000308077 DDX19BQ9UMR2 479 aa8.85□□□□□ -0.99
PTCD2-201ENST00000308077 KDM2BQ8NHM5 1336 aa8.84□□□□□ -0.99
PTCD2-201ENST00000308077 KIF3CO14782 793 aa8.84□□□□□ -0.99
PTCD2-201ENST00000308077 ANXA1P04083 346 aa8.84□□□□□ -0.99
PTCD2-201ENST00000308077 FAM98CQ17RN3 349 aaKnown RBP8.84□□□□□ -0.99
PTCD2-201ENST00000308077 PCDHB15Q9Y5E8 787 aa8.84□□□□□ -0.99
PTCD2-201ENST00000308077 F6X3S4 739 aa8.83□□□□□ -1
PTCD2-201ENST00000308077 AAMPQ13685 434 aa8.83□□□□□ -1
PTCD2-201ENST00000308077 PROSER3Q2NL68 480 aa8.83□□□□□ -1
PTCD2-201ENST00000308077 MARCH10Q8NA82 808 aaPredicted RBP8.83□□□□□ -1
PTCD2-201ENST00000308077 PIGBQ92521 554 aa8.83□□□□□ -1
PTCD2-201ENST00000308077 FMNL2Q96PY5 1086 aa8.83□□□□□ -1
PTCD2-201ENST00000308077 CAMKK2Q96RR4 588 aa8.83□□□□□ -1
PTCD2-201ENST00000308077 TMOD3Q9NYL9 352 aa8.83□□□□□ -1
PTCD2-201ENST00000308077 BCL9O00512 1426 aa8.83□□□□□ -1
PTCD2-201ENST00000308077 ZBTB7BO15156 539 aaPredicted RBP8.83□□□□□ -1
PTCD2-201ENST00000308077 PDIA6Q15084 440 aa8.83□□□□□ -1
PTCD2-201ENST00000308077 GPR162Q16538 588 aa8.83□□□□□ -1
PTCD2-201ENST00000308077 INTS3Q68E01 1043 aaKnown RBP8.83□□□□□ -1
PTCD2-201ENST00000308077 ZBTB40Q9NUA8 1239 aa8.83□□□□□ -1
PTCD2-201ENST00000308077 USP16Q9Y5T5 823 aa8.83□□□□□ -1
PTCD2-201ENST00000308077 IGHDP01880 384 aa8.82□□□□□ -1
PTCD2-201ENST00000308077 SNRPA1P09661 255 aaKnown RBP8.82□□□□□ -1
PTCD2-201ENST00000308077 FKBP5Q13451 457 aaPredicted RBP8.82□□□□□ -1
PTCD2-201ENST00000308077 FHDC1Q9C0D6 1143 aaPredicted RBP8.82□□□□□ -1
PTCD2-201ENST00000308077 KAT6BQ8WYB5 2073 aa8.82□□□□□ -1
PTCD2-201ENST00000308077 PXDNLA1KZ92 1463 aa8.82□□□□□ -1
PTCD2-201ENST00000308077 TSHZ2Q9NRE2 1034 aa8.82□□□□□ -1
PTCD2-201ENST00000308077 DBF4Q9UBU7 674 aaPredicted RBP8.82□□□□□ -1
PTCD2-201ENST00000308077 ASAP1Q9ULH1 1129 aa8.82□□□□□ -1
PTCD2-201ENST00000308077 CACNA1AO00555 2505 aa8.82□□□□□ -1
PTCD2-201ENST00000308077 PTCD1O75127 700 aaKnown RBP8.81□□□□□ -1
PTCD2-201ENST00000308077 TOMM70O94826 608 aa8.81□□□□□ -1
PTCD2-201ENST00000308077 SNX27Q96L92 541 aa8.81□□□□□ -1
PTCD2-201ENST00000308077 CHMP4AQ9BY43 222 aa8.81□□□□□ -1
PTCD2-201ENST00000308077 ATG3Q9NT62 314 aa8.81□□□□□ -1
PTCD2-201ENST00000308077 PRIM1P49642 420 aaKnown RBP8.8□□□□□ -1
PTCD2-201ENST00000308077 EZH2Q15910 746 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms