RNA–Protein interactions for RNA: ENST00000307289.10

SYVN1-202, Transcript of synoviolin 1, humanhuman

TSL 1 (best) BASIC

Gene SYVN1, Length 2,841 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-202ENST00000307289 FOXD4L4Q8WXT5 416 aaPredicted RBP20.12■□□□□ 0.81
SYVN1-202ENST00000307289 PA2G4Q9UQ80 394 aaKnown RBP20.12■□□□□ 0.81
SYVN1-202ENST00000307289 ZNF142P52746 1687 aaPredicted RBP20.12■□□□□ 0.81
SYVN1-202ENST00000307289 NEK4P51957 841 aa20.12■□□□□ 0.81
SYVN1-202ENST00000307289 POLA2Q14181 598 aa20.12■□□□□ 0.81
SYVN1-202ENST00000307289 GOLGA6L3A6NEY3 463 aa20.11■□□□□ 0.81
SYVN1-202ENST00000307289 CHRNA2Q15822 529 aa20.11■□□□□ 0.81
SYVN1-202ENST00000307289 NLRP2Q9NX02 1062 aa20.11■□□□□ 0.81
SYVN1-202ENST00000307289 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.11■□□□□ 0.81
SYVN1-202ENST00000307289 ADAMTSL3P82987 1691 aa20.11■□□□□ 0.81
SYVN1-202ENST00000307289 FSD2A1L4K1 749 aa20.11■□□□□ 0.81
SYVN1-202ENST00000307289 GAS2L3Q86XJ1 694 aa20.1■□□□□ 0.81
SYVN1-202ENST00000307289 AMOTQ4VCS5 1084 aa20.1■□□□□ 0.81
SYVN1-202ENST00000307289 STAP2Q9UGK3 403 aa20.1■□□□□ 0.81
SYVN1-202ENST00000307289 UPF3BQ9BZI7 483 aaKnown RBP20.09■□□□□ 0.81
SYVN1-202ENST00000307289 RGPD5Q99666 1765 aa20.09■□□□□ 0.81
SYVN1-202ENST00000307289 GBP4Q96PP9 640 aa20.09■□□□□ 0.81
SYVN1-202ENST00000307289 DBF4Q9UBU7 674 aaPredicted RBP20.09■□□□□ 0.81
SYVN1-202ENST00000307289 C1orf167Q5SNV9 1468 aa20.09■□□□□ 0.81
SYVN1-202ENST00000307289 KDM3BQ7LBC6 1761 aa20.09■□□□□ 0.81
SYVN1-202ENST00000307289 ERBB3P21860 1342 aa20.09■□□□□ 0.81
SYVN1-202ENST00000307289 PI4K2BQ8TCG2 481 aa20.08■□□□□ 0.81
SYVN1-202ENST00000307289 CACNA1FO60840 1977 aa20.08■□□□□ 0.81
SYVN1-202ENST00000307289 PXDNLA1KZ92 1463 aa20.08■□□□□ 0.81
SYVN1-202ENST00000307289 BAG4O95429 457 aaKnown RBP20.08■□□□□ 0.8
SYVN1-202ENST00000307289 JARID2Q92833 1246 aaPredicted RBP20.08■□□□□ 0.8
SYVN1-202ENST00000307289 C19orf44Q9H6X5 657 aa20.08■□□□□ 0.8
SYVN1-202ENST00000307289 ZDHHC9Q9Y397 364 aa20.08■□□□□ 0.8
SYVN1-202ENST00000307289 ST18O60284 1047 aa20.07■□□□□ 0.8
SYVN1-202ENST00000307289 DTNBO60941 627 aa20.07■□□□□ 0.8
SYVN1-202ENST00000307289 MYL6BP14649 208 aa20.07■□□□□ 0.8
SYVN1-202ENST00000307289 NFATC2IPQ8NCF5 419 aa20.07■□□□□ 0.8
SYVN1-202ENST00000307289 C9orf78Q9NZ63 289 aaPredicted RBP20.07■□□□□ 0.8
SYVN1-202ENST00000307289 SLIT3O75094 1523 aa20.06■□□□□ 0.8
SYVN1-202ENST00000307289 HOXB7P09629 217 aa20.06■□□□□ 0.8
SYVN1-202ENST00000307289 MCTP1Q6DN14 999 aa20.06■□□□□ 0.8
SYVN1-202ENST00000307289 LARP6Q9BRS8 491 aaKnown RBP20.06■□□□□ 0.8
SYVN1-202ENST00000307289 LMO7Q8WWI1 1683 aa20.06■□□□□ 0.8
SYVN1-202ENST00000307289 OS9Q13438 667 aaPredicted RBP20.05■□□□□ 0.8
SYVN1-202ENST00000307289 PDIA6Q15084 440 aa20.05■□□□□ 0.8
SYVN1-202ENST00000307289 TUBGCP6Q96RT7 1819 aa20.05■□□□□ 0.8
SYVN1-202ENST00000307289 KLHDC4Q8TBB5 520 aa20.04■□□□□ 0.8
SYVN1-202ENST00000307289 KAZALD1Q96I82 304 aa20.04■□□□□ 0.8
SYVN1-202ENST00000307289 TMX3Q96JJ7 454 aa20.04■□□□□ 0.8
SYVN1-202ENST00000307289 KSR2Q6VAB6 950 aa20.04■□□□□ 0.8
SYVN1-202ENST00000307289 L1TD1Q5T7N2 865 aaKnown RBP20.03■□□□□ 0.8
SYVN1-202ENST00000307289 CYP2E1P05181 493 aaPredicted RBP20.03■□□□□ 0.8
SYVN1-202ENST00000307289 HSPA2P54652 639 aa20.03■□□□□ 0.8
SYVN1-202ENST00000307289 KIF1BPQ96EK5 621 aa20.03■□□□□ 0.8
SYVN1-202ENST00000307289 TMEM94Q12767 1356 aa20.03■□□□□ 0.8
SYVN1-202ENST00000307289 CSB-PGBD3P0DP91 1061 aa20.03■□□□□ 0.8
SYVN1-202ENST00000307289 SUCLG2Q96I99 432 aa20.03■□□□□ 0.8
SYVN1-202ENST00000307289 TRPM3Q9HCF6 1732 aaPredicted RBP20.03■□□□□ 0.8
SYVN1-202ENST00000307289 HEG1Q9ULI3 1381 aa20.03■□□□□ 0.8
SYVN1-202ENST00000307289 SPG7Q9UQ90 795 aa20.03■□□□□ 0.8
SYVN1-202ENST00000307289 NCAPD2Q15021 1401 aa20.02■□□□□ 0.8
SYVN1-202ENST00000307289 CWC27Q6UX04 472 aaKnown RBP20.02■□□□□ 0.8
SYVN1-202ENST00000307289 RAPGEF4Q8WZA2 1011 aa20.02■□□□□ 0.8
SYVN1-202ENST00000307289 RAB11FIP3O75154 756 aa20.02■□□□□ 0.79
SYVN1-202ENST00000307289 ATF3P18847 181 aa20.02■□□□□ 0.79
SYVN1-202ENST00000307289 ZNF790Q6PG37 636 aa20.02■□□□□ 0.79
SYVN1-202ENST00000307289 SIL1Q9H173 461 aa20.01■□□□□ 0.79
SYVN1-202ENST00000307289 PHRF1Q9P1Y6 1649 aaKnown RBP20.01■□□□□ 0.79
SYVN1-202ENST00000307289 N4BP2Q86UW6 1770 aaPredicted RBP20.01■□□□□ 0.79
SYVN1-202ENST00000307289 ZNF496Q96IT1 587 aaPredicted RBP20.01■□□□□ 0.79
SYVN1-202ENST00000307289 KDM6AO15550 1401 aaPredicted RBP20.01■□□□□ 0.79
SYVN1-202ENST00000307289 IGKV5-2P06315 115 aa20■□□□□ 0.79
SYVN1-202ENST00000307289 FOXD4L6Q3SYB3 417 aaPredicted RBP20■□□□□ 0.79
SYVN1-202ENST00000307289 FOXD4L3Q6VB84 417 aaPredicted RBP20■□□□□ 0.79
SYVN1-202ENST00000307289 BICC1Q9H694 974 aaKnown RBP20■□□□□ 0.79
SYVN1-202ENST00000307289 USP16Q9Y5T5 823 aa20■□□□□ 0.79
SYVN1-202ENST00000307289 CPA1P15085 419 aa20■□□□□ 0.79
SYVN1-202ENST00000307289 GRPEL1Q9HAV7 217 aa20■□□□□ 0.79
SYVN1-202ENST00000307289 DDX49Q9Y6V7 483 aaKnown RBP20■□□□□ 0.79
SYVN1-202ENST00000307289 MEGF6O75095 1541 aa20■□□□□ 0.79
SYVN1-202ENST00000307289 NPHP3Q7Z494 1330 aa19.99■□□□□ 0.79
SYVN1-202ENST00000307289 PHKG2P15735 406 aa19.99■□□□□ 0.79
SYVN1-202ENST00000307289 NCLP19338 710 aaKnown RBP19.99■□□□□ 0.79
SYVN1-202ENST00000307289 RASEFQ8IZ41 740 aa19.99■□□□□ 0.79
SYVN1-202ENST00000307289 SLC52A2Q9HAB3 445 aa19.98■□□□□ 0.79
SYVN1-202ENST00000307289 CYP27B1O15528 508 aa19.98■□□□□ 0.79
SYVN1-202ENST00000307289 EIF5BO60841 1220 aaKnown RBP19.98■□□□□ 0.79
SYVN1-202ENST00000307289 DDX54Q8TDD1 881 aaKnown RBP19.98■□□□□ 0.79
SYVN1-202ENST00000307289 XAGE3Q8WTP9 111 aa19.98■□□□□ 0.79
SYVN1-202ENST00000307289 RRAGDQ9NQL2 400 aaPredicted RBP19.98■□□□□ 0.79
SYVN1-202ENST00000307289 TLR7Q9NYK1 1049 aaKnown RBP19.98■□□□□ 0.79
SYVN1-202ENST00000307289 EPHA10Q5JZY3 1008 aa19.98■□□□□ 0.79
SYVN1-202ENST00000307289 COPS6Q7L5N1 327 aa19.98■□□□□ 0.79
SYVN1-202ENST00000307289 DDX21Q9NR30 783 aaKnown RBP eCLIP19.98■□□□□ 0.79
SYVN1-202ENST00000307289 GRM8O00222 908 aa19.97■□□□□ 0.79
SYVN1-202ENST00000307289 RIC3Q7Z5B4 369 aa19.97■□□□□ 0.79
SYVN1-202ENST00000307289 CCDC8Q9H0W5 538 aaPredicted RBP19.97■□□□□ 0.79
SYVN1-202ENST00000307289 MST1RQ04912 1400 aa19.97■□□□□ 0.79
SYVN1-202ENST00000307289 PRPF40AO75400 957 aaKnown RBP19.97■□□□□ 0.79
SYVN1-202ENST00000307289 LMBRD1Q9NUN5 540 aa19.97■□□□□ 0.79
SYVN1-202ENST00000307289 HYPKQ9NX55 129 aa19.97■□□□□ 0.79
SYVN1-202ENST00000307289 SGSM2O43147 1006 aa19.96■□□□□ 0.79
SYVN1-202ENST00000307289 SASH1O94885 1247 aa19.96■□□□□ 0.79
SYVN1-202ENST00000307289 NUCB2P80303 420 aa19.96■□□□□ 0.79
SYVN1-202ENST00000307289 CLEC17AQ6ZS10 378 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms