RNA–Protein interactions for RNA: ENST00000306593.1

PCDHGC4-201, Transcript of protocadherin gamma subfamily C, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC4, Length 4,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4-201ENST00000306593 CPSF1Q10570 1443 aaKnown RBP13.03□□□□□ -0.32
PCDHGC4-201ENST00000306593 GTF2E1P29083 439 aaPredicted RBP13.03□□□□□ -0.32
PCDHGC4-201ENST00000306593 SH2B1Q9NRF2 756 aaPredicted RBP13.03□□□□□ -0.32
PCDHGC4-201ENST00000306593 PTCH1Q13635 1447 aa13.02□□□□□ -0.32
PCDHGC4-201ENST00000306593 DNAJC2Q99543 621 aaKnown RBP13.02□□□□□ -0.32
PCDHGC4-201ENST00000306593 SIL1Q9H173 461 aa13.02□□□□□ -0.32
PCDHGC4-201ENST00000306593 TSPY26PQ9H489 355 aa13.02□□□□□ -0.32
PCDHGC4-201ENST00000306593 CHPF2Q9P2E5 772 aa13.02□□□□□ -0.32
PCDHGC4-201ENST00000306593 AOX1Q06278 1338 aa13.02□□□□□ -0.32
PCDHGC4-201ENST00000306593 PREX1Q8TCU6 1659 aa13.02□□□□□ -0.33
PCDHGC4-201ENST00000306593 BLOC1S2Q6QNY1 142 aa13.02□□□□□ -0.33
PCDHGC4-201ENST00000306593 KSR2Q6VAB6 950 aa13.02□□□□□ -0.33
PCDHGC4-201ENST00000306593 ESYT1Q9BSJ8 1104 aa13.02□□□□□ -0.33
PCDHGC4-201ENST00000306593 CCDC39Q9UFE4 941 aa13.02□□□□□ -0.33
PCDHGC4-201ENST00000306593 PRR36Q9H6K5 1346 aa13.02□□□□□ -0.33
PCDHGC4-201ENST00000306593 CCDC158Q5M9N0 1113 aa13.01□□□□□ -0.33
PCDHGC4-201ENST00000306593 CPLX1O14810 134 aa13.01□□□□□ -0.33
PCDHGC4-201ENST00000306593 SYNE3Q6ZMZ3 975 aa13.01□□□□□ -0.33
PCDHGC4-201ENST00000306593 JAKMIP1Q96N16 626 aaKnown RBP13.01□□□□□ -0.33
PCDHGC4-201ENST00000306593 SSFA2P28290 1259 aa13.01□□□□□ -0.33
PCDHGC4-201ENST00000306593 C19orf44Q9H6X5 657 aa13.01□□□□□ -0.33
PCDHGC4-201ENST00000306593 GCP02774 474 aa13.01□□□□□ -0.33
PCDHGC4-201ENST00000306593 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.01□□□□□ -0.33
PCDHGC4-201ENST00000306593 RALYLQ86SE5 291 aaKnown RBP13.01□□□□□ -0.33
PCDHGC4-201ENST00000306593 TTC41PQ6P2S7 1318 aa13.01□□□□□ -0.33
PCDHGC4-201ENST00000306593 ANKARQ7Z5J8 1434 aa13□□□□□ -0.33
PCDHGC4-201ENST00000306593 NPHP3Q7Z494 1330 aa13□□□□□ -0.33
PCDHGC4-201ENST00000306593 G3V3G9 751 aa13□□□□□ -0.33
PCDHGC4-201ENST00000306593 GOLGA6L19H0YKK7 550 aa13□□□□□ -0.33
PCDHGC4-201ENST00000306593 DCAF8Q5TAQ9 597 aa13□□□□□ -0.33
PCDHGC4-201ENST00000306593 BICD2Q8TD16 824 aa13□□□□□ -0.33
PCDHGC4-201ENST00000306593 IGSF1Q8N6C5 1336 aa13□□□□□ -0.33
PCDHGC4-201ENST00000306593 SNRPA1P09661 255 aaKnown RBP13□□□□□ -0.33
PCDHGC4-201ENST00000306593 RAB3GAP1Q15042 981 aa13□□□□□ -0.33
PCDHGC4-201ENST00000306593 C16orf71Q8IYS4 520 aaPredicted RBP13□□□□□ -0.33
PCDHGC4-201ENST00000306593 USP26Q9BXU7 913 aa13□□□□□ -0.33
PCDHGC4-201ENST00000306593 CLTCQ00610 1675 aaKnown RBP13□□□□□ -0.33
PCDHGC4-201ENST00000306593 KLHL40Q2TBA0 621 aa13□□□□□ -0.33
PCDHGC4-201ENST00000306593 MYD88Q99836 296 aa13□□□□□ -0.33
PCDHGC4-201ENST00000306593 LIMCH1Q9UPQ0 1083 aa13□□□□□ -0.33
PCDHGC4-201ENST00000306593 CASTP20810 708 aaKnown RBP12.99□□□□□ -0.33
PCDHGC4-201ENST00000306593 WASHC4Q2M389 1173 aa12.99□□□□□ -0.33
PCDHGC4-201ENST00000306593 RBM33Q96EV2 1170 aaKnown RBP12.99□□□□□ -0.33
PCDHGC4-201ENST00000306593 BAG4O95429 457 aaKnown RBP12.99□□□□□ -0.33
PCDHGC4-201ENST00000306593 TPM3P06753 285 aa12.99□□□□□ -0.33
PCDHGC4-201ENST00000306593 LINS1Q8NG48 757 aa12.99□□□□□ -0.33
PCDHGC4-201ENST00000306593 EPB41L2O43491 1005 aaKnown RBP12.99□□□□□ -0.33
PCDHGC4-201ENST00000306593 DHX16O60231 1041 aaKnown RBP12.99□□□□□ -0.33
PCDHGC4-201ENST00000306593 G2E3Q7L622 706 aa12.99□□□□□ -0.33
PCDHGC4-201ENST00000306593 RNMTO43148 476 aaKnown RBP12.98□□□□□ -0.33
PCDHGC4-201ENST00000306593 CCDC57Q2TAC2 916 aa12.98□□□□□ -0.33
PCDHGC4-201ENST00000306593 DNAJC5Q9H3Z4 198 aa12.98□□□□□ -0.33
PCDHGC4-201ENST00000306593 LRRC7Q96NW7 1537 aa12.98□□□□□ -0.33
PCDHGC4-201ENST00000306593 KRT85P78386 507 aa12.98□□□□□ -0.33
PCDHGC4-201ENST00000306593 TRIM29Q14134 588 aa12.98□□□□□ -0.33
PCDHGC4-201ENST00000306593 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.98□□□□□ -0.33
PCDHGC4-201ENST00000306593 SASS6Q6UVJ0 657 aa12.98□□□□□ -0.33
PCDHGC4-201ENST00000306593 TBC1D2BQ9UPU7 963 aa12.98□□□□□ -0.33
PCDHGC4-201ENST00000306593 CCDC73Q6ZRK6 1079 aa12.98□□□□□ -0.33
PCDHGC4-201ENST00000306593 UPF3BQ9BZI7 483 aaKnown RBP12.98□□□□□ -0.33
PCDHGC4-201ENST00000306593 STRN4Q9NRL3 753 aa12.98□□□□□ -0.33
PCDHGC4-201ENST00000306593 CEP126Q9P2H0 1117 aa12.98□□□□□ -0.33
PCDHGC4-201ENST00000306593 TTC39AQ5SRH9 613 aa12.97□□□□□ -0.33
PCDHGC4-201ENST00000306593 ZSCAN25Q6NSZ9 544 aa12.97□□□□□ -0.33
PCDHGC4-201ENST00000306593 SYTL4Q96C24 671 aaPredicted RBP12.97□□□□□ -0.33
PCDHGC4-201ENST00000306593 TOMM22Q9NS69 142 aa12.97□□□□□ -0.33
PCDHGC4-201ENST00000306593 BECN2A8MW95 431 aa12.97□□□□□ -0.33
PCDHGC4-201ENST00000306593 GRM8O00222 908 aa12.97□□□□□ -0.33
PCDHGC4-201ENST00000306593 APPP05067 770 aa12.97□□□□□ -0.33
PCDHGC4-201ENST00000306593 CTNNA3Q9UI47 895 aa12.97□□□□□ -0.33
PCDHGC4-201ENST00000306593 LARP1BQ659C4 914 aaKnown RBP12.97□□□□□ -0.33
PCDHGC4-201ENST00000306593 CDC42BPGQ6DT37 1551 aa12.97□□□□□ -0.33
PCDHGC4-201ENST00000306593 DDX54Q8TDD1 881 aaKnown RBP12.97□□□□□ -0.33
PCDHGC4-201ENST00000306593 PRPF40BQ6NWY9 871 aaKnown RBP12.96□□□□□ -0.33
PCDHGC4-201ENST00000306593 AKAP2Q9Y2D5 859 aa12.96□□□□□ -0.33
PCDHGC4-201ENST00000306593 MYOM1P52179 1685 aa12.96□□□□□ -0.33
PCDHGC4-201ENST00000306593 TMEM131LA2VDJ0 1609 aa12.96□□□□□ -0.33
PCDHGC4-201ENST00000306593 TMX3Q96JJ7 454 aa12.96□□□□□ -0.33
PCDHGC4-201ENST00000306593 FIBPO43427 364 aa12.96□□□□□ -0.34
PCDHGC4-201ENST00000306593 STARD3NLO95772 234 aa12.96□□□□□ -0.34
PCDHGC4-201ENST00000306593 ZNF396Q96N95 335 aaPredicted RBP12.96□□□□□ -0.34
PCDHGC4-201ENST00000306593 HMG20BQ9P0W2 317 aa12.96□□□□□ -0.34
PCDHGC4-201ENST00000306593 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.96□□□□□ -0.34
PCDHGC4-201ENST00000306593 ARHGEF28Q8N1W1 1705 aaKnown RBP12.96□□□□□ -0.34
PCDHGC4-201ENST00000306593 ANKRD13DQ6ZTN6 518 aa12.95□□□□□ -0.34
PCDHGC4-201ENST00000306593 RBM42Q9BTD8 480 aaKnown RBP12.95□□□□□ -0.34
PCDHGC4-201ENST00000306593 TEX13AQ9BXU3 409 aaPredicted RBP12.95□□□□□ -0.34
PCDHGC4-201ENST00000306593 HMGB1P09429 215 aaKnown RBP12.95□□□□□ -0.34
PCDHGC4-201ENST00000306593 LRRC59Q96AG4 307 aaKnown RBP12.95□□□□□ -0.34
PCDHGC4-201ENST00000306593 SPATA31D1Q6ZQQ2 1576 aa12.95□□□□□ -0.34
PCDHGC4-201ENST00000306593 CHMLP26374 656 aa12.95□□□□□ -0.34
PCDHGC4-201ENST00000306593 INTS4Q96HW7 963 aaKnown RBP12.95□□□□□ -0.34
PCDHGC4-201ENST00000306593 U3KPZ7 1027 aaPredicted RBP12.95□□□□□ -0.34
PCDHGC4-201ENST00000306593 USP19O94966 1318 aa12.95□□□□□ -0.34
PCDHGC4-201ENST00000306593 AKAP17AQ02040 695 aaKnown RBP12.95□□□□□ -0.34
PCDHGC4-201ENST00000306593 DDX21Q9NR30 783 aaKnown RBP eCLIP12.94□□□□□ -0.34
PCDHGC4-201ENST00000306593 A0A087WZG4 1122 aa12.94□□□□□ -0.34
PCDHGC4-201ENST00000306593 TSHZ3Q63HK5 1081 aa12.94□□□□□ -0.34
PCDHGC4-201ENST00000306593 BOLA2Q9H3K6 86 aa12.94□□□□□ -0.34
PCDHGC4-201ENST00000306593 TMOD3Q9NYL9 352 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms