RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 ZSCAN25Q6NSZ9 544 aa15.43■□□□□ 0.06
TRIM56-201ENST00000306085 MAP3K9P80192 1104 aa15.43■□□□□ 0.06
TRIM56-201ENST00000306085 SUDS3Q9H7L9 328 aaPredicted RBP15.43■□□□□ 0.06
TRIM56-201ENST00000306085 CETN1Q12798 172 aa15.43■□□□□ 0.06
TRIM56-201ENST00000306085 MRVI1Q9Y6F6 885 aa15.43■□□□□ 0.06
TRIM56-201ENST00000306085 CCDC174Q6PII3 467 aa15.43■□□□□ 0.06
TRIM56-201ENST00000306085 ATRIPQ8WXE1 791 aa15.42■□□□□ 0.06
TRIM56-201ENST00000306085 TMC6Q7Z403 805 aa15.42■□□□□ 0.06
TRIM56-201ENST00000306085 WHAMMQ8TF30 809 aa15.42■□□□□ 0.06
TRIM56-201ENST00000306085 DDX12PQ92771 950 aa15.42■□□□□ 0.06
TRIM56-201ENST00000306085 LRP2BPQ9P2M1 347 aa15.42■□□□□ 0.06
TRIM56-201ENST00000306085 GMNNO75496 209 aa15.42■□□□□ 0.06
TRIM56-201ENST00000306085 KIF5BP33176 963 aa15.42■□□□□ 0.06
TRIM56-201ENST00000306085 SNW1Q13573 536 aaKnown RBP15.42■□□□□ 0.06
TRIM56-201ENST00000306085 TCERG1LQ5VWI1 586 aa15.42■□□□□ 0.06
TRIM56-201ENST00000306085 RSRC1Q96IZ7 334 aaKnown RBP15.42■□□□□ 0.06
TRIM56-201ENST00000306085 MIA2Q96PC5 1412 aa15.42■□□□□ 0.06
TRIM56-201ENST00000306085 CARMIL2Q6F5E8 1435 aa15.42■□□□□ 0.06
TRIM56-201ENST00000306085 MTIF2P46199 727 aaKnown RBP15.42■□□□□ 0.06
TRIM56-201ENST00000306085 SETSIPP0DME0 302 aa15.42■□□□□ 0.06
TRIM56-201ENST00000306085 RRBP1Q9P2E9 1410 aaKnown RBP15.41■□□□□ 0.06
TRIM56-201ENST00000306085 RASAL2Q9UJF2 1139 aa15.41■□□□□ 0.06
TRIM56-201ENST00000306085 NOB1Q9ULX3 412 aaKnown RBP15.41■□□□□ 0.06
TRIM56-201ENST00000306085 PRC1O43663 620 aa15.41■□□□□ 0.06
TRIM56-201ENST00000306085 ATF3P18847 181 aa15.41■□□□□ 0.06
TRIM56-201ENST00000306085 TRMT1LQ7Z2T5 733 aaKnown RBP15.41■□□□□ 0.06
TRIM56-201ENST00000306085 SMG6Q86US8 1419 aaKnown RBP15.41■□□□□ 0.06
TRIM56-201ENST00000306085 CCDC170Q8IYT3 715 aa15.41■□□□□ 0.06
TRIM56-201ENST00000306085 SEPT10Q9P0V9 454 aa15.41■□□□□ 0.06
TRIM56-201ENST00000306085 CUX2O14529 1486 aa15.41■□□□□ 0.06
TRIM56-201ENST00000306085 LRRC45Q96CN5 670 aa15.4■□□□□ 0.06
TRIM56-201ENST00000306085 SELENOSQ9BQE4 189 aa15.4■□□□□ 0.06
TRIM56-201ENST00000306085 STIM2Q9P246 746 aa15.4■□□□□ 0.06
TRIM56-201ENST00000306085 CCDC12Q8WUD4 166 aaPredicted RBP15.4■□□□□ 0.06
TRIM56-201ENST00000306085 PAXIP1Q6ZW49 1069 aaPredicted RBP15.4■□□□□ 0.06
TRIM56-201ENST00000306085 MYL6BP14649 208 aa15.4■□□□□ 0.06
TRIM56-201ENST00000306085 SYCP3Q8IZU3 236 aa15.4■□□□□ 0.06
TRIM56-201ENST00000306085 ZBTB9Q96C00 473 aa15.4■□□□□ 0.06
TRIM56-201ENST00000306085 PFDN4Q9NQP4 134 aa15.4■□□□□ 0.06
TRIM56-201ENST00000306085 FERMT3Q86UX7 667 aa15.4■□□□□ 0.06
TRIM56-201ENST00000306085 TACC1O75410 805 aa15.4■□□□□ 0.06
TRIM56-201ENST00000306085 CARMIL1Q5VZK9 1371 aa15.39■□□□□ 0.05
TRIM56-201ENST00000306085 MCM6Q14566 821 aa15.39■□□□□ 0.05
TRIM56-201ENST00000306085 CTNNA3Q9UI47 895 aa15.39■□□□□ 0.05
TRIM56-201ENST00000306085 TMEM266Q2M3C6 531 aa15.39■□□□□ 0.05
TRIM56-201ENST00000306085 MMRN2Q9H8L6 949 aa15.39■□□□□ 0.05
TRIM56-201ENST00000306085 CFAP157Q5JU67 520 aa15.39■□□□□ 0.05
TRIM56-201ENST00000306085 CKAP2LQ8IYA6 745 aa15.39■□□□□ 0.05
TRIM56-201ENST00000306085 GSTA5Q7RTV2 222 aa15.39■□□□□ 0.05
TRIM56-201ENST00000306085 CCDC40Q4G0X9 1142 aa15.38■□□□□ 0.05
TRIM56-201ENST00000306085 KANK4Q5T7N3 995 aaPredicted RBP15.38■□□□□ 0.05
TRIM56-201ENST00000306085 STMN4Q9H169 189 aaPredicted RBP15.38■□□□□ 0.05
TRIM56-201ENST00000306085 CNTLNQ9NXG0 1405 aa15.38■□□□□ 0.05
TRIM56-201ENST00000306085 KRT13P13646 458 aa15.38■□□□□ 0.05
TRIM56-201ENST00000306085 FAM160A1Q05DH4 1040 aa15.38■□□□□ 0.05
TRIM56-201ENST00000306085 GBP6Q6ZN66 633 aa15.38■□□□□ 0.05
TRIM56-201ENST00000306085 ZSCAN31Q96LW9 406 aaPredicted RBP15.38■□□□□ 0.05
TRIM56-201ENST00000306085 KRT222Q8N1A0 295 aa15.38■□□□□ 0.05
TRIM56-201ENST00000306085 GCC1Q96CN9 775 aa15.38■□□□□ 0.05
TRIM56-201ENST00000306085 CCDC18Q5T9S5 1454 aa15.38■□□□□ 0.05
TRIM56-201ENST00000306085 RAD54L2Q9Y4B4 1467 aa15.38■□□□□ 0.05
TRIM56-201ENST00000306085 SNX16P57768 344 aa15.38■□□□□ 0.05
TRIM56-201ENST00000306085 SMIM23A6NLE4 172 aa15.38■□□□□ 0.05
TRIM56-201ENST00000306085 CUL5Q93034 780 aa15.37■□□□□ 0.05
TRIM56-201ENST00000306085 MCM4P33991 863 aa15.37■□□□□ 0.05
TRIM56-201ENST00000306085 RAB34Q9BZG1 259 aa15.37■□□□□ 0.05
TRIM56-201ENST00000306085 STMN2Q93045 179 aa15.37■□□□□ 0.05
TRIM56-201ENST00000306085 AIDAQ96BJ3 306 aa15.37■□□□□ 0.05
TRIM56-201ENST00000306085 IDH1O75874 414 aaKnown RBP15.37■□□□□ 0.05
TRIM56-201ENST00000306085 KRT32Q14532 448 aa15.37■□□□□ 0.05
TRIM56-201ENST00000306085 TTC14Q96N46 770 aa15.37■□□□□ 0.05
TRIM56-201ENST00000306085 TCHPQ9BT92 498 aa15.37■□□□□ 0.05
TRIM56-201ENST00000306085 VPS8Q8N3P4 1428 aa15.37■□□□□ 0.05
TRIM56-201ENST00000306085 CCDC114Q96M63 670 aa15.37■□□□□ 0.05
TRIM56-201ENST00000306085 STRN4Q9NRL3 753 aa15.36■□□□□ 0.05
TRIM56-201ENST00000306085 TBC1D5Q92609 795 aa15.36■□□□□ 0.05
TRIM56-201ENST00000306085 BIN1O00499 593 aa15.36■□□□□ 0.05
TRIM56-201ENST00000306085 CASQ2O14958 399 aaPredicted RBP15.36■□□□□ 0.05
TRIM56-201ENST00000306085 GSDMDP57764 484 aa15.36■□□□□ 0.05
TRIM56-201ENST00000306085 EHBP1Q8NDI1 1231 aa15.36■□□□□ 0.05
TRIM56-201ENST00000306085 ARFGAP3Q9NP61 516 aa15.36■□□□□ 0.05
TRIM56-201ENST00000306085 PRR16Q569H4 304 aa15.36■□□□□ 0.05
TRIM56-201ENST00000306085 PHAXQ9H814 394 aaKnown RBP15.36■□□□□ 0.05
TRIM56-201ENST00000306085 CNNM3Q8NE01 707 aa15.36■□□□□ 0.05
TRIM56-201ENST00000306085 IFI16Q16666 785 aaKnown RBP15.36■□□□□ 0.05
TRIM56-201ENST00000306085 ZEB2O60315 1214 aa15.36■□□□□ 0.05
TRIM56-201ENST00000306085 DNAJC21Q5F1R6 531 aaKnown RBP15.36■□□□□ 0.05
TRIM56-201ENST00000306085 PLVAPQ9BX97 442 aa15.36■□□□□ 0.05
TRIM56-201ENST00000306085 CIB2O75838 187 aa15.35■□□□□ 0.05
TRIM56-201ENST00000306085 CRACR2BQ8N4Y2 399 aaPredicted RBP15.35■□□□□ 0.05
TRIM56-201ENST00000306085 SEC62Q99442 399 aaKnown RBP15.35■□□□□ 0.05
TRIM56-201ENST00000306085 BICD1Q96G01 975 aa15.35■□□□□ 0.05
TRIM56-201ENST00000306085 TMOD2Q9NZR1 351 aa15.35■□□□□ 0.05
TRIM56-201ENST00000306085 NBPF1Q3BBV0 1214 aa15.35■□□□□ 0.05
TRIM56-201ENST00000306085 CCDC171Q6TFL3 1326 aa15.35■□□□□ 0.05
TRIM56-201ENST00000306085 MINDY4BA8MYZ0 360 aa15.35■□□□□ 0.05
TRIM56-201ENST00000306085 BCAR3O75815 825 aa15.35■□□□□ 0.05
TRIM56-201ENST00000306085 CAPN2P17655 700 aa15.35■□□□□ 0.05
TRIM56-201ENST00000306085 ERCC5P28715 1186 aaPredicted RBP15.35■□□□□ 0.05
TRIM56-201ENST00000306085 DDX27Q96GQ7 796 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms