RNA–Protein interactions for RNA: ENST00000302273.2

VPREB1-201, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene VPREB1, Length 626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-201ENST00000302273 CRKLP46109 303 aaKnown RBP11.41□□□□□ -0.58
VPREB1-201ENST00000302273 CCDC30Q5VVM6 783 aa11.41□□□□□ -0.58
VPREB1-201ENST00000302273 DUSP27Q5VZP5 1158 aa11.41□□□□□ -0.58
VPREB1-201ENST00000302273 INTS5Q6P9B9 1019 aaKnown RBP11.41□□□□□ -0.58
VPREB1-201ENST00000302273 LINC00116Q8NCU8 138 aa11.41□□□□□ -0.58
VPREB1-201ENST00000302273 USP16Q9Y5T5 823 aa11.41□□□□□ -0.58
VPREB1-201ENST00000302273 PAPPAQ13219 1627 aa11.41□□□□□ -0.58
VPREB1-201ENST00000302273 SIPA1L3O60292 1781 aaPredicted RBP11.41□□□□□ -0.58
VPREB1-201ENST00000302273 TWISTNBQ3B726 338 aaPredicted RBP11.4□□□□□ -0.58
VPREB1-201ENST00000302273 TRAPPC3LQ5T215 181 aa11.4□□□□□ -0.58
VPREB1-201ENST00000302273 TFCP2L1Q9NZI6 479 aa11.4□□□□□ -0.58
VPREB1-201ENST00000302273 DLG5Q8TDM6 1919 aa11.4□□□□□ -0.58
VPREB1-201ENST00000302273 LY75O60449 1722 aa11.4□□□□□ -0.58
VPREB1-201ENST00000302273 VAMP4O75379 141 aa11.39□□□□□ -0.59
VPREB1-201ENST00000302273 EIF5P55010 431 aaKnown RBP11.39□□□□□ -0.59
VPREB1-201ENST00000302273 HDGFL1Q5TGJ6 251 aa11.39□□□□□ -0.59
VPREB1-201ENST00000302273 C8orf58Q8NAV2 365 aa11.39□□□□□ -0.59
VPREB1-201ENST00000302273 SPINK5Q9NQ38 1064 aaPredicted RBP11.39□□□□□ -0.59
VPREB1-201ENST00000302273 DDX21Q9NR30 783 aaKnown RBP eCLIP11.39□□□□□ -0.59
VPREB1-201ENST00000302273 HYPKQ9NX55 129 aa11.39□□□□□ -0.59
VPREB1-201ENST00000302273 UBR2Q8IWV8 1755 aa11.39□□□□□ -0.59
VPREB1-201ENST00000302273 PSDA5PKW4 1024 aaPredicted RBP11.38□□□□□ -0.59
VPREB1-201ENST00000302273 GNPATO15228 680 aa11.38□□□□□ -0.59
VPREB1-201ENST00000302273 TSR2Q969E8 191 aaKnown RBP11.38□□□□□ -0.59
VPREB1-201ENST00000302273 STK31Q9BXU1 1019 aa11.38□□□□□ -0.59
VPREB1-201ENST00000302273 C5P01031 1676 aa11.37□□□□□ -0.59
VPREB1-201ENST00000302273 KDM3BQ7LBC6 1761 aa11.37□□□□□ -0.59
VPREB1-201ENST00000302273 ERVV-1B6SEH8 477 aa11.37□□□□□ -0.59
VPREB1-201ENST00000302273 BRPF1P55201 1214 aaPredicted RBP11.37□□□□□ -0.59
VPREB1-201ENST00000302273 EXOSC9Q06265 439 aaKnown RBP11.37□□□□□ -0.59
VPREB1-201ENST00000302273 ALDH1L2Q3SY69 923 aa11.37□□□□□ -0.59
VPREB1-201ENST00000302273 CLEC4GQ6UXB4 293 aa11.37□□□□□ -0.59
VPREB1-201ENST00000302273 CDCA7LQ96GN5 454 aa11.37□□□□□ -0.59
VPREB1-201ENST00000302273 GTF3C3Q9Y5Q9 886 aa11.37□□□□□ -0.59
VPREB1-201ENST00000302273 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.36□□□□□ -0.59
VPREB1-201ENST00000302273 RFC4P35249 363 aa11.36□□□□□ -0.59
VPREB1-201ENST00000302273 KCNQ4P56696 695 aa11.36□□□□□ -0.59
VPREB1-201ENST00000302273 R3HDM1Q15032 1099 aaKnown RBP11.36□□□□□ -0.59
VPREB1-201ENST00000302273 ZNF827Q17R98 1081 aa11.36□□□□□ -0.59
VPREB1-201ENST00000302273 NLGN1Q8N2Q7 840 aa11.36□□□□□ -0.59
VPREB1-201ENST00000302273 NBPF26B4DH59 902 aa11.35□□□□□ -0.59
VPREB1-201ENST00000302273 ZPR1O75312 459 aa11.35□□□□□ -0.59
VPREB1-201ENST00000302273 A1BGP04217 495 aa11.35□□□□□ -0.59
VPREB1-201ENST00000302273 EIF2S2P20042 333 aaKnown RBP11.35□□□□□ -0.59
VPREB1-201ENST00000302273 PDIA6Q15084 440 aa11.35□□□□□ -0.59
VPREB1-201ENST00000302273 NBPF10Q6P3W6 841 aaKnown RBP11.35□□□□□ -0.59
VPREB1-201ENST00000302273 NBPF15Q8N660 670 aa11.35□□□□□ -0.59
VPREB1-201ENST00000302273 TSPYL6Q8N831 410 aa11.35□□□□□ -0.59
VPREB1-201ENST00000302273 ARHGEF1Q92888 912 aaKnown RBP11.35□□□□□ -0.59
VPREB1-201ENST00000302273 ANO8Q9HCE9 1232 aaPredicted RBP11.35□□□□□ -0.59
VPREB1-201ENST00000302273 NARFQ9UHQ1 456 aa11.35□□□□□ -0.59
VPREB1-201ENST00000302273 ZBTB1Q9Y2K1 713 aa11.35□□□□□ -0.59
VPREB1-201ENST00000302273 RREB1Q92766 1687 aa11.35□□□□□ -0.59
VPREB1-201ENST00000302273 PRAMEF22A3QJZ6 481 aa11.34□□□□□ -0.59
VPREB1-201ENST00000302273 ELL2O00472 640 aaPredicted RBP11.34□□□□□ -0.59
VPREB1-201ENST00000302273 DDX58O95786 925 aaKnown RBP11.34□□□□□ -0.59
VPREB1-201ENST00000302273 CANXP27824 592 aaKnown RBP11.34□□□□□ -0.59
VPREB1-201ENST00000302273 LRP10Q7Z4F1 713 aa11.34□□□□□ -0.59
VPREB1-201ENST00000302273 ZNF652Q9Y2D9 606 aa11.34□□□□□ -0.59
VPREB1-201ENST00000302273 C4BP0C0L5 1744 aa11.34□□□□□ -0.59
VPREB1-201ENST00000302273 PNPLA7Q6ZV29 1317 aa11.34□□□□□ -0.59
VPREB1-201ENST00000302273 SENP3-EIF4A1A0A087X0R7 540 aa11.33□□□□□ -0.6
VPREB1-201ENST00000302273 KRT24Q2M2I5 525 aa11.33□□□□□ -0.6
VPREB1-201ENST00000302273 HSP90AB3PQ58FF7 597 aa11.33□□□□□ -0.6
VPREB1-201ENST00000302273 COL23A1Q86Y22 540 aaPredicted RBP11.33□□□□□ -0.6
VPREB1-201ENST00000302273 MTFR1LQ9H019 292 aa11.33□□□□□ -0.6
VPREB1-201ENST00000302273 USP42Q9H9J4 1324 aaKnown RBP11.33□□□□□ -0.6
VPREB1-201ENST00000302273 COL15A1P39059 1388 aa11.32□□□□□ -0.6
VPREB1-201ENST00000302273 SLC4A2P04920 1241 aa11.32□□□□□ -0.6
VPREB1-201ENST00000302273 KIF6Q6ZMV9 814 aa11.32□□□□□ -0.6
VPREB1-201ENST00000302273 ANKRD13DQ6ZTN6 518 aa11.32□□□□□ -0.6
VPREB1-201ENST00000302273 DZIP3Q86Y13 1208 aaKnown RBP11.32□□□□□ -0.6
VPREB1-201ENST00000302273 PLBD2Q8NHP8 589 aa11.32□□□□□ -0.6
VPREB1-201ENST00000302273 ARHGAP45Q92619 1136 aa11.32□□□□□ -0.6
VPREB1-201ENST00000302273 CHPF2Q9P2E5 772 aa11.32□□□□□ -0.6
VPREB1-201ENST00000302273 VIRMAQ69YN4 1812 aaKnown RBP11.32□□□□□ -0.6
VPREB1-201ENST00000302273 PTPRCP08575 1304 aa11.32□□□□□ -0.6
VPREB1-201ENST00000302273 COPS6Q7L5N1 327 aa11.31□□□□□ -0.6
VPREB1-201ENST00000302273 MAP3K15Q6ZN16 1313 aa11.31□□□□□ -0.6
VPREB1-201ENST00000302273 COL5A3P25940 1745 aaPredicted RBP11.3□□□□□ -0.6
VPREB1-201ENST00000302273 TJP1Q07157 1748 aa11.3□□□□□ -0.6
VPREB1-201ENST00000302273 NUP188Q5SRE5 1749 aa11.3□□□□□ -0.6
VPREB1-201ENST00000302273 IPO8O15397 1037 aaKnown RBP11.3□□□□□ -0.6
VPREB1-201ENST00000302273 CAMTA2O94983 1202 aa11.3□□□□□ -0.6
VPREB1-201ENST00000302273 MYL6BP14649 208 aa11.3□□□□□ -0.6
VPREB1-201ENST00000302273 RARSP54136 660 aaKnown RBP11.3□□□□□ -0.6
VPREB1-201ENST00000302273 TRIM28Q13263 835 aaKnown RBP11.3□□□□□ -0.6
VPREB1-201ENST00000302273 GIGYF2Q6Y7W6 1299 aaKnown RBP11.3□□□□□ -0.6
VPREB1-201ENST00000302273 IBTKQ9P2D0 1353 aaPredicted RBP11.29□□□□□ -0.6
VPREB1-201ENST00000302273 PHF14O94880 888 aa11.29□□□□□ -0.6
VPREB1-201ENST00000302273 GYS1P13807 737 aa11.29□□□□□ -0.6
VPREB1-201ENST00000302273 KSR2Q6VAB6 950 aa11.29□□□□□ -0.6
VPREB1-201ENST00000302273 XAGE3Q8WTP9 111 aa11.29□□□□□ -0.6
VPREB1-201ENST00000302273 SPON1Q9HCB6 807 aa11.29□□□□□ -0.6
VPREB1-201ENST00000302273 RNF123Q5XPI4 1314 aa11.29□□□□□ -0.6
VPREB1-201ENST00000302273 KIF16BQ96L93 1317 aa11.29□□□□□ -0.6
VPREB1-201ENST00000302273 TAF1LQ8IZX4 1826 aa11.28□□□□□ -0.6
VPREB1-201ENST00000302273 MSH5O43196 834 aa11.28□□□□□ -0.6
VPREB1-201ENST00000302273 POLD1P28340 1107 aa11.28□□□□□ -0.6
VPREB1-201ENST00000302273 TM4SF1P30408 202 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms