RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 ARXQ96QS3 562 aa23.97■■□□□ 1.43
SPSB3-201ENST00000301717 SRP68Q9UHB9 627 aaKnown RBP23.97■■□□□ 1.43
SPSB3-201ENST00000301717 CANXP27824 592 aaKnown RBP23.96■■□□□ 1.43
SPSB3-201ENST00000301717 A1BGP04217 495 aa23.95■■□□□ 1.42
SPSB3-201ENST00000301717 POLD1P28340 1107 aa23.95■■□□□ 1.42
SPSB3-201ENST00000301717 PIP4K2AP48426 406 aaPredicted RBP23.95■■□□□ 1.42
SPSB3-201ENST00000301717 USP16Q9Y5T5 823 aa23.95■■□□□ 1.42
SPSB3-201ENST00000301717 SOS1Q07889 1333 aaPredicted RBP23.94■■□□□ 1.42
SPSB3-201ENST00000301717 KLHL34Q8N239 644 aa23.94■■□□□ 1.42
SPSB3-201ENST00000301717 FHDC1Q9C0D6 1143 aaPredicted RBP23.94■■□□□ 1.42
SPSB3-201ENST00000301717 STARD3NLO95772 234 aa23.93■■□□□ 1.42
SPSB3-201ENST00000301717 RFC4P35249 363 aa23.93■■□□□ 1.42
SPSB3-201ENST00000301717 LMOD3Q0VAK6 560 aa23.93■■□□□ 1.42
SPSB3-201ENST00000301717 ADRA2BP18089 450 aa23.93■■□□□ 1.42
SPSB3-201ENST00000301717 TSPYL4Q9UJ04 414 aa23.93■■□□□ 1.42
SPSB3-201ENST00000301717 KDM3BQ7LBC6 1761 aa23.92■■□□□ 1.42
SPSB3-201ENST00000301717 COL24A1Q17RW2 1714 aa23.92■■□□□ 1.42
SPSB3-201ENST00000301717 GYS1P13807 737 aa23.92■■□□□ 1.42
SPSB3-201ENST00000301717 ZNF330Q9Y3S2 320 aaPredicted RBP23.92■■□□□ 1.42
SPSB3-201ENST00000301717 C4AP0C0L4 1744 aa23.91■■□□□ 1.42
SPSB3-201ENST00000301717 SNRPA1P09661 255 aaKnown RBP23.91■■□□□ 1.42
SPSB3-201ENST00000301717 EIF4A1P60842 406 aaKnown RBP23.91■■□□□ 1.42
SPSB3-201ENST00000301717 LAS1LQ9Y4W2 734 aaKnown RBP23.91■■□□□ 1.42
SPSB3-201ENST00000301717 FAM9BQ8IZU0 186 aa23.9■■□□□ 1.42
SPSB3-201ENST00000301717 COL15A1P39059 1388 aa23.89■■□□□ 1.42
SPSB3-201ENST00000301717 SYT17Q9BSW7 474 aa23.89■■□□□ 1.41
SPSB3-201ENST00000301717 TEX13AQ9BXU3 409 aaPredicted RBP23.89■■□□□ 1.41
SPSB3-201ENST00000301717 USP42Q9H9J4 1324 aaKnown RBP23.88■■□□□ 1.41
SPSB3-201ENST00000301717 MMP10P09238 476 aa23.87■■□□□ 1.41
SPSB3-201ENST00000301717 EIF5P55010 431 aaKnown RBP23.87■■□□□ 1.41
SPSB3-201ENST00000301717 FKBP8Q14318 412 aa23.87■■□□□ 1.41
SPSB3-201ENST00000301717 KRT24Q2M2I5 525 aa23.87■■□□□ 1.41
SPSB3-201ENST00000301717 USPL1Q5W0Q7 1092 aa23.87■■□□□ 1.41
SPSB3-201ENST00000301717 GIGYF1O75420 1035 aaPredicted RBP23.86■■□□□ 1.41
SPSB3-201ENST00000301717 NLGN2Q8NFZ4 835 aa23.85■■□□□ 1.41
SPSB3-201ENST00000301717 SALL2Q9Y467 1007 aaPredicted RBP23.85■■□□□ 1.41
SPSB3-201ENST00000301717 NBPF26B4DH59 902 aa23.84■■□□□ 1.41
SPSB3-201ENST00000301717 NBPF10Q6P3W6 841 aaKnown RBP23.84■■□□□ 1.41
SPSB3-201ENST00000301717 NBPF15Q8N660 670 aa23.84■■□□□ 1.41
SPSB3-201ENST00000301717 BCL2L12Q9HB09 334 aa23.84■■□□□ 1.41
SPSB3-201ENST00000301717 TBC1D2BQ9UPU7 963 aa23.84■■□□□ 1.41
SPSB3-201ENST00000301717 UTRNP46939 3433 aa23.84■■□□□ 1.41
SPSB3-201ENST00000301717 CHL1O00533 1208 aa23.84■■□□□ 1.41
SPSB3-201ENST00000301717 GOLGB1Q14789 3259 aaKnown RBP23.83■■□□□ 1.41
SPSB3-201ENST00000301717 ZPR1O75312 459 aa23.83■■□□□ 1.4
SPSB3-201ENST00000301717 NLGN1Q8N2Q7 840 aa23.83■■□□□ 1.4
SPSB3-201ENST00000301717 NARFQ9UHQ1 456 aa23.83■■□□□ 1.4
SPSB3-201ENST00000301717 IL6STP40189 918 aaPredicted RBP23.82■■□□□ 1.4
SPSB3-201ENST00000301717 DDR1Q08345 913 aa23.81■■□□□ 1.4
SPSB3-201ENST00000301717 MBIPQ9NS73 344 aa23.8■■□□□ 1.4
SPSB3-201ENST00000301717 NECTIN2Q92692 538 aa23.79■■□□□ 1.4
SPSB3-201ENST00000301717 BABAM1Q9NWV8 329 aa23.79■■□□□ 1.4
SPSB3-201ENST00000301717 ZNF853P0CG23 659 aa23.78■■□□□ 1.4
SPSB3-201ENST00000301717 EIF2S2P20042 333 aaKnown RBP23.78■■□□□ 1.4
SPSB3-201ENST00000301717 NGEFQ8N5V2 710 aa23.78■■□□□ 1.4
SPSB3-201ENST00000301717 CFAP44Q96MT7 982 aa23.78■■□□□ 1.4
SPSB3-201ENST00000301717 LAMB4A4D0S4 1761 aa23.78■■□□□ 1.4
SPSB3-201ENST00000301717 DIEXFQ68CQ4 756 aaKnown RBP23.77■■□□□ 1.4
SPSB3-201ENST00000301717 DZIP3Q86Y13 1208 aaKnown RBP23.77■■□□□ 1.4
SPSB3-201ENST00000301717 ANXA1P04083 346 aa23.76■■□□□ 1.39
SPSB3-201ENST00000301717 MYL6BP14649 208 aa23.76■■□□□ 1.39
SPSB3-201ENST00000301717 NFIXQ14938 502 aa23.76■■□□□ 1.39
SPSB3-201ENST00000301717 BICDL1Q6ZP65 573 aa23.76■■□□□ 1.39
SPSB3-201ENST00000301717 WWC1Q8IX03 1113 aa23.76■■□□□ 1.39
SPSB3-201ENST00000301717 WWC3Q9ULE0 1092 aa23.76■■□□□ 1.39
SPSB3-201ENST00000301717 A0A087WZG4 1122 aa23.76■■□□□ 1.39
SPSB3-201ENST00000301717 CAMTA2O94983 1202 aa23.76■■□□□ 1.39
SPSB3-201ENST00000301717 TM4SF1P30408 202 aa23.76■■□□□ 1.39
SPSB3-201ENST00000301717 PARP3Q9Y6F1 533 aa23.76■■□□□ 1.39
SPSB3-201ENST00000301717 POLRMTO00411 1230 aaKnown RBP23.75■■□□□ 1.39
SPSB3-201ENST00000301717 IFT57Q9NWB7 429 aa23.75■■□□□ 1.39
SPSB3-201ENST00000301717 PROSER3Q2NL68 480 aa23.74■■□□□ 1.39
SPSB3-201ENST00000301717 TBC1D9BQ66K14 1250 aa23.74■■□□□ 1.39
SPSB3-201ENST00000301717 NPM2Q86SE8 214 aaKnown RBP23.74■■□□□ 1.39
SPSB3-201ENST00000301717 TSR2Q969E8 191 aaKnown RBP23.73■■□□□ 1.39
SPSB3-201ENST00000301717 CD2APQ9Y5K6 639 aa23.73■■□□□ 1.39
SPSB3-201ENST00000301717 SCN7AQ01118 1682 aa23.72■■□□□ 1.39
SPSB3-201ENST00000301717 ELL2O00472 640 aaPredicted RBP23.72■■□□□ 1.39
SPSB3-201ENST00000301717 GNAI1P63096 354 aa23.72■■□□□ 1.39
SPSB3-201ENST00000301717 PDIA6Q15084 440 aa23.72■■□□□ 1.39
SPSB3-201ENST00000301717 CCDC27Q2M243 656 aa23.72■■□□□ 1.39
SPSB3-201ENST00000301717 TTLL7Q6ZT98 887 aa23.72■■□□□ 1.39
SPSB3-201ENST00000301717 PELP1Q8IZL8 1130 aaKnown RBP23.72■■□□□ 1.39
SPSB3-201ENST00000301717 MIER1Q8N108 512 aa23.72■■□□□ 1.39
SPSB3-201ENST00000301717 CALD1Q05682 793 aaKnown RBP23.71■■□□□ 1.39
SPSB3-201ENST00000301717 C10orf71Q711Q0 1435 aa23.7■■□□□ 1.39
SPSB3-201ENST00000301717 DUSP27Q5VZP5 1158 aa23.7■■□□□ 1.38
SPSB3-201ENST00000301717 HLFQ16534 295 aa23.69■■□□□ 1.38
SPSB3-201ENST00000301717 LRP10Q7Z4F1 713 aa23.69■■□□□ 1.38
SPSB3-201ENST00000301717 CCER2I3L3R5 266 aa23.68■■□□□ 1.38
SPSB3-201ENST00000301717 CCDC24Q8N4L8 307 aa23.68■■□□□ 1.38
SPSB3-201ENST00000301717 C8orf58Q8NAV2 365 aa23.68■■□□□ 1.38
SPSB3-201ENST00000301717 SERPINB2P05120 415 aa23.67■■□□□ 1.38
SPSB3-201ENST00000301717 CHPF2Q9P2E5 772 aa23.67■■□□□ 1.38
SPSB3-201ENST00000301717 HDGFL1Q5TGJ6 251 aa23.67■■□□□ 1.38
SPSB3-201ENST00000301717 ZBTB3Q9H5J0 574 aa23.67■■□□□ 1.38
SPSB3-201ENST00000301717 SPINK5Q9NQ38 1064 aaPredicted RBP23.67■■□□□ 1.38
SPSB3-201ENST00000301717 BCORQ6W2J9 1755 aa23.66■■□□□ 1.38
SPSB3-201ENST00000301717 CARMIL3Q8ND23 1372 aa23.66■■□□□ 1.38
SPSB3-201ENST00000301717 PXDNLA1KZ92 1463 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms