RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 UBR3Q6ZT12 1888 aa15.84■□□□□ 0.13
HMGB2-201ENST00000296503 ADRA2BP18089 450 aa15.84■□□□□ 0.13
HMGB2-201ENST00000296503 CANXP27824 592 aaKnown RBP15.84■□□□□ 0.13
HMGB2-201ENST00000296503 MIER1Q8N108 512 aa15.83■□□□□ 0.12
HMGB2-201ENST00000296503 MYH14Q7Z406 1995 aaKnown RBP15.83■□□□□ 0.12
HMGB2-201ENST00000296503 SNRPA1P09661 255 aaKnown RBP15.82■□□□□ 0.12
HMGB2-201ENST00000296503 TRIM35Q9UPQ4 493 aa15.82■□□□□ 0.12
HMGB2-201ENST00000296503 COL5A3P25940 1745 aaPredicted RBP15.82■□□□□ 0.12
HMGB2-201ENST00000296503 TJP1Q07157 1748 aa15.82■□□□□ 0.12
HMGB2-201ENST00000296503 KLHL34Q8N239 644 aa15.82■□□□□ 0.12
HMGB2-201ENST00000296503 TSPYL4Q9UJ04 414 aa15.82■□□□□ 0.12
HMGB2-201ENST00000296503 ZBTB1Q9Y2K1 713 aa15.82■□□□□ 0.12
HMGB2-201ENST00000296503 LAS1LQ9Y4W2 734 aaKnown RBP15.82■□□□□ 0.12
HMGB2-201ENST00000296503 USP16Q9Y5T5 823 aa15.82■□□□□ 0.12
HMGB2-201ENST00000296503 UBR2Q8IWV8 1755 aa15.81■□□□□ 0.12
HMGB2-201ENST00000296503 PRAMEF22A3QJZ6 481 aa15.8■□□□□ 0.12
HMGB2-201ENST00000296503 A1BGP04217 495 aa15.8■□□□□ 0.12
HMGB2-201ENST00000296503 NPM2Q86SE8 214 aaKnown RBP15.8■□□□□ 0.12
HMGB2-201ENST00000296503 FAM9BQ8IZU0 186 aa15.8■□□□□ 0.12
HMGB2-201ENST00000296503 ZNF330Q9Y3S2 320 aaPredicted RBP15.8■□□□□ 0.12
HMGB2-201ENST00000296503 ZPR1O75312 459 aa15.8■□□□□ 0.12
HMGB2-201ENST00000296503 NLGN1Q8N2Q7 840 aa15.8■□□□□ 0.12
HMGB2-201ENST00000296503 FHDC1Q9C0D6 1143 aaPredicted RBP15.8■□□□□ 0.12
HMGB2-201ENST00000296503 SENP3-EIF4A1A0A087X0R7 540 aa15.79■□□□□ 0.12
HMGB2-201ENST00000296503 EIF4A1P60842 406 aaKnown RBP15.79■□□□□ 0.12
HMGB2-201ENST00000296503 SRP68Q9UHB9 627 aaKnown RBP15.79■□□□□ 0.12
HMGB2-201ENST00000296503 SOS1Q07889 1333 aaPredicted RBP15.79■□□□□ 0.12
HMGB2-201ENST00000296503 SYT17Q9BSW7 474 aa15.78■□□□□ 0.12
HMGB2-201ENST00000296503 BABAM1Q9NWV8 329 aa15.78■□□□□ 0.12
HMGB2-201ENST00000296503 CICQ96RK0 1608 aaPredicted RBP15.78■□□□□ 0.12
HMGB2-201ENST00000296503 GYS1P13807 737 aa15.78■□□□□ 0.12
HMGB2-201ENST00000296503 A0A087WZG4 1122 aa15.77■□□□□ 0.11
HMGB2-201ENST00000296503 GIGYF1O75420 1035 aaPredicted RBP15.76■□□□□ 0.11
HMGB2-201ENST00000296503 IL6STP40189 918 aaPredicted RBP15.76■□□□□ 0.11
HMGB2-201ENST00000296503 PIP4K2AP48426 406 aaPredicted RBP15.76■□□□□ 0.11
HMGB2-201ENST00000296503 EIF5P55010 431 aaKnown RBP15.76■□□□□ 0.11
HMGB2-201ENST00000296503 USPL1Q5W0Q7 1092 aa15.76■□□□□ 0.11
HMGB2-201ENST00000296503 COL15A1P39059 1388 aa15.76■□□□□ 0.11
HMGB2-201ENST00000296503 USP42Q9H9J4 1324 aaKnown RBP15.76■□□□□ 0.11
HMGB2-201ENST00000296503 MMP10P09238 476 aa15.76■□□□□ 0.11
HMGB2-201ENST00000296503 NARFQ9UHQ1 456 aa15.76■□□□□ 0.11
HMGB2-201ENST00000296503 DCAF8L1A6NGE4 600 aa15.75■□□□□ 0.11
HMGB2-201ENST00000296503 CHL1O00533 1208 aa15.75■□□□□ 0.11
HMGB2-201ENST00000296503 CALD1Q05682 793 aaKnown RBP15.75■□□□□ 0.11
HMGB2-201ENST00000296503 FKBP8Q14318 412 aa15.74■□□□□ 0.11
HMGB2-201ENST00000296503 TBC1D2BQ9UPU7 963 aa15.74■□□□□ 0.11
HMGB2-201ENST00000296503 SALL2Q9Y467 1007 aaPredicted RBP15.74■□□□□ 0.11
HMGB2-201ENST00000296503 PARP3Q9Y6F1 533 aa15.74■□□□□ 0.11
HMGB2-201ENST00000296503 CFAP44Q96MT7 982 aa15.74■□□□□ 0.11
HMGB2-201ENST00000296503 EIF2S2P20042 333 aaKnown RBP15.73■□□□□ 0.11
HMGB2-201ENST00000296503 KDM3BQ7LBC6 1761 aa15.73■□□□□ 0.11
HMGB2-201ENST00000296503 COL24A1Q17RW2 1714 aa15.73■□□□□ 0.11
HMGB2-201ENST00000296503 GNAI1P63096 354 aa15.72■□□□□ 0.11
HMGB2-201ENST00000296503 NBPF26B4DH59 902 aa15.71■□□□□ 0.11
HMGB2-201ENST00000296503 NBPF10Q6P3W6 841 aaKnown RBP15.71■□□□□ 0.11
HMGB2-201ENST00000296503 NGEFQ8N5V2 710 aa15.71■□□□□ 0.11
HMGB2-201ENST00000296503 NBPF15Q8N660 670 aa15.71■□□□□ 0.11
HMGB2-201ENST00000296503 DZIP3Q86Y13 1208 aaKnown RBP15.71■□□□□ 0.11
HMGB2-201ENST00000296503 IFT57Q9NWB7 429 aa15.71■□□□□ 0.11
HMGB2-201ENST00000296503 CD2APQ9Y5K6 639 aa15.71■□□□□ 0.11
HMGB2-201ENST00000296503 C4AP0C0L4 1744 aa15.7■□□□□ 0.1
HMGB2-201ENST00000296503 MYL6BP14649 208 aa15.7■□□□□ 0.1
HMGB2-201ENST00000296503 CCDC27Q2M243 656 aa15.7■□□□□ 0.1
HMGB2-201ENST00000296503 BICDL1Q6ZP65 573 aa15.7■□□□□ 0.1
HMGB2-201ENST00000296503 WWC1Q8IX03 1113 aa15.7■□□□□ 0.1
HMGB2-201ENST00000296503 MBIPQ9NS73 344 aa15.7■□□□□ 0.1
HMGB2-201ENST00000296503 ZNF853P0CG23 659 aa15.69■□□□□ 0.1
HMGB2-201ENST00000296503 TM4SF1P30408 202 aa15.69■□□□□ 0.1
HMGB2-201ENST00000296503 KRT24Q2M2I5 525 aa15.69■□□□□ 0.1
HMGB2-201ENST00000296503 NLGN2Q8NFZ4 835 aa15.69■□□□□ 0.1
HMGB2-201ENST00000296503 NECTIN2Q92692 538 aa15.69■□□□□ 0.1
HMGB2-201ENST00000296503 BCL2L12Q9HB09 334 aa15.69■□□□□ 0.1
HMGB2-201ENST00000296503 CCER2I3L3R5 266 aa15.69■□□□□ 0.1
HMGB2-201ENST00000296503 NFIXQ14938 502 aa15.68■□□□□ 0.1
HMGB2-201ENST00000296503 NCBP3Q53F19 620 aaKnown RBP15.68■□□□□ 0.1
HMGB2-201ENST00000296503 YTHDC1Q96MU7 727 aaKnown RBP15.68■□□□□ 0.1
HMGB2-201ENST00000296503 DDR1Q08345 913 aa15.67■□□□□ 0.1
HMGB2-201ENST00000296503 CAMTA2O94983 1202 aa15.67■□□□□ 0.1
HMGB2-201ENST00000296503 POLRMTO00411 1230 aaKnown RBP15.66■□□□□ 0.1
HMGB2-201ENST00000296503 ELL2O00472 640 aaPredicted RBP15.66■□□□□ 0.1
HMGB2-201ENST00000296503 GPR162Q16538 588 aa15.66■□□□□ 0.1
HMGB2-201ENST00000296503 DUSP27Q5VZP5 1158 aa15.66■□□□□ 0.1
HMGB2-201ENST00000296503 TBC1D9BQ66K14 1250 aa15.66■□□□□ 0.1
HMGB2-201ENST00000296503 SERPINB2P05120 415 aa15.65■□□□□ 0.1
HMGB2-201ENST00000296503 SETDB2Q96T68 719 aa15.65■□□□□ 0.1
HMGB2-201ENST00000296503 ZNF652Q9Y2D9 606 aa15.65■□□□□ 0.1
HMGB2-201ENST00000296503 SUPT16HQ9Y5B9 1047 aaKnown RBP15.65■□□□□ 0.1
HMGB2-201ENST00000296503 ERBB4Q15303 1308 aa15.65■□□□□ 0.1
HMGB2-201ENST00000296503 HDGFL1Q5TGJ6 251 aa15.65■□□□□ 0.1
HMGB2-201ENST00000296503 KIF6Q6ZMV9 814 aa15.65■□□□□ 0.1
HMGB2-201ENST00000296503 ANP32EQ9BTT0 268 aa15.65■□□□□ 0.1
HMGB2-201ENST00000296503 LAMB4A4D0S4 1761 aa15.64■□□□□ 0.09
HMGB2-201ENST00000296503 ANXA1P04083 346 aa15.64■□□□□ 0.09
HMGB2-201ENST00000296503 CLEC4GQ6UXB4 293 aa15.64■□□□□ 0.09
HMGB2-201ENST00000296503 TTLL7Q6ZT98 887 aa15.64■□□□□ 0.09
HMGB2-201ENST00000296503 WDR63Q8IWG1 891 aa15.64■□□□□ 0.09
HMGB2-201ENST00000296503 TSR2Q969E8 191 aaKnown RBP15.64■□□□□ 0.09
HMGB2-201ENST00000296503 HOXB7P09629 217 aa15.63■□□□□ 0.09
HMGB2-201ENST00000296503 PDIA6Q15084 440 aa15.63■□□□□ 0.09
HMGB2-201ENST00000296503 IL16Q14005 1332 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms