RNA–Protein interactions for RNA: ENST00000296315.7

ARHGEF3-201, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-201ENST00000296315 SHPRHQ149N8 1683 aa12.3□□□□□ -0.44
ARHGEF3-201ENST00000296315 USP27XA6NNY8 438 aa12.3□□□□□ -0.44
ARHGEF3-201ENST00000296315 ZNF165P49910 485 aa12.3□□□□□ -0.44
ARHGEF3-201ENST00000296315 FAM200AQ8TCP9 573 aa12.3□□□□□ -0.44
ARHGEF3-201ENST00000296315 PDRG1Q9NUG6 133 aa12.3□□□□□ -0.44
ARHGEF3-201ENST00000296315 USP16Q9Y5T5 823 aa12.3□□□□□ -0.44
ARHGEF3-201ENST00000296315 RUFY3Q7L099 469 aa12.3□□□□□ -0.44
ARHGEF3-201ENST00000296315 PTPN14Q15678 1187 aa12.3□□□□□ -0.44
ARHGEF3-201ENST00000296315 CACTINQ8WUQ7 758 aaKnown RBP12.3□□□□□ -0.44
ARHGEF3-201ENST00000296315 LTV1Q96GA3 475 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF3-201ENST00000296315 ESF1Q9H501 851 aaKnown RBP12.3□□□□□ -0.44
ARHGEF3-201ENST00000296315 CTNNA3Q9UI47 895 aa12.3□□□□□ -0.44
ARHGEF3-201ENST00000296315 FAM69CQ0P6D2 419 aa12.29□□□□□ -0.44
ARHGEF3-201ENST00000296315 KRT222Q8N1A0 295 aa12.29□□□□□ -0.44
ARHGEF3-201ENST00000296315 SPATA32Q96LK8 384 aa12.29□□□□□ -0.44
ARHGEF3-201ENST00000296315 TRIM34Q9BYJ4 488 aa12.29□□□□□ -0.44
ARHGEF3-201ENST00000296315 SNX14Q9Y5W7 946 aa12.29□□□□□ -0.44
ARHGEF3-201ENST00000296315 NSD2O96028 1365 aa12.29□□□□□ -0.44
ARHGEF3-201ENST00000296315 CCDC66A2RUB6 948 aa12.29□□□□□ -0.44
ARHGEF3-201ENST00000296315 KRT85P78386 507 aa12.29□□□□□ -0.44
ARHGEF3-201ENST00000296315 TTC6Q86TZ1 520 aa12.29□□□□□ -0.44
ARHGEF3-201ENST00000296315 ASXL2Q76L83 1435 aa12.29□□□□□ -0.44
ARHGEF3-201ENST00000296315 ZSCAN25Q6NSZ9 544 aa12.29□□□□□ -0.44
ARHGEF3-201ENST00000296315 FEZ1Q99689 392 aa12.29□□□□□ -0.44
ARHGEF3-201ENST00000296315 SMTNL1A8MU46 457 aa12.28□□□□□ -0.44
ARHGEF3-201ENST00000296315 HSP90B1P14625 803 aaKnown RBP12.28□□□□□ -0.44
ARHGEF3-201ENST00000296315 IDI1Q13907 227 aa12.28□□□□□ -0.44
ARHGEF3-201ENST00000296315 HOMER1Q86YM7 354 aa12.28□□□□□ -0.44
ARHGEF3-201ENST00000296315 CCAR2Q8N163 923 aaKnown RBP12.28□□□□□ -0.44
ARHGEF3-201ENST00000296315 ANKRD7Q92527 254 aa12.28□□□□□ -0.44
ARHGEF3-201ENST00000296315 TPM3P06753 285 aa12.28□□□□□ -0.44
ARHGEF3-201ENST00000296315 UBTFL1P0CB47 393 aaPredicted RBP12.28□□□□□ -0.44
ARHGEF3-201ENST00000296315 IRX5P78411 483 aaPredicted RBP12.28□□□□□ -0.44
ARHGEF3-201ENST00000296315 ADCK5Q3MIX3 580 aa12.28□□□□□ -0.44
ARHGEF3-201ENST00000296315 CCDC144BQ3MJ40 725 aa12.28□□□□□ -0.44
ARHGEF3-201ENST00000296315 CDC37L1Q7L3B6 337 aa12.28□□□□□ -0.44
ARHGEF3-201ENST00000296315 CCDC144CPQ8IYA2 1237 aa12.28□□□□□ -0.44
ARHGEF3-201ENST00000296315 TRPM2O94759 1503 aa12.28□□□□□ -0.44
ARHGEF3-201ENST00000296315 SKIDA1Q1XH10 827 aa12.28□□□□□ -0.44
ARHGEF3-201ENST00000296315 TIGD1Q96MW7 591 aa12.28□□□□□ -0.44
ARHGEF3-201ENST00000296315 SKILP12757 684 aa12.27□□□□□ -0.44
ARHGEF3-201ENST00000296315 HAP1P54257 671 aaPredicted RBP12.27□□□□□ -0.44
ARHGEF3-201ENST00000296315 MRVI1Q9Y6F6 885 aa12.27□□□□□ -0.44
ARHGEF3-201ENST00000296315 SRGAP3O43295 1099 aa12.27□□□□□ -0.45
ARHGEF3-201ENST00000296315 GNL2Q13823 731 aaKnown RBP12.27□□□□□ -0.45
ARHGEF3-201ENST00000296315 ZRSR1Q15695 479 aaKnown RBP12.26□□□□□ -0.45
ARHGEF3-201ENST00000296315 KMT5BQ4FZB7 885 aa12.26□□□□□ -0.45
ARHGEF3-201ENST00000296315 MTMR6Q9Y217 621 aa12.26□□□□□ -0.45
ARHGEF3-201ENST00000296315 SBNO2Q9Y2G9 1366 aa12.26□□□□□ -0.45
ARHGEF3-201ENST00000296315 ABCA6Q8N139 1617 aa12.26□□□□□ -0.45
ARHGEF3-201ENST00000296315 H3BQV1 296 aa12.26□□□□□ -0.45
ARHGEF3-201ENST00000296315 ANXA1P04083 346 aa12.26□□□□□ -0.45
ARHGEF3-201ENST00000296315 IFFO2Q5TF58 517 aa12.26□□□□□ -0.45
ARHGEF3-201ENST00000296315 PTCH1Q13635 1447 aa12.26□□□□□ -0.45
ARHGEF3-201ENST00000296315 RPAP1Q9BWH6 1393 aaPredicted RBP12.26□□□□□ -0.45
ARHGEF3-201ENST00000296315 IL13P35225 146 aa12.26□□□□□ -0.45
ARHGEF3-201ENST00000296315 KIF18AQ8NI77 898 aa12.26□□□□□ -0.45
ARHGEF3-201ENST00000296315 CYP46A1Q9Y6A2 500 aa12.26□□□□□ -0.45
ARHGEF3-201ENST00000296315 PREX2Q70Z35 1606 aa12.26□□□□□ -0.45
ARHGEF3-201ENST00000296315 SLFN14P0C7P3 912 aa12.25□□□□□ -0.45
ARHGEF3-201ENST00000296315 ZNF75DP51815 510 aa12.25□□□□□ -0.45
ARHGEF3-201ENST00000296315 ERCC6LQ2NKX8 1250 aa12.25□□□□□ -0.45
ARHGEF3-201ENST00000296315 ISM2Q6H9L7 571 aa12.25□□□□□ -0.45
ARHGEF3-201ENST00000296315 FBXO38Q6PIJ6 1188 aa12.25□□□□□ -0.45
ARHGEF3-201ENST00000296315 TCHHQ07283 1943 aa12.25□□□□□ -0.45
ARHGEF3-201ENST00000296315 RAB11FIP3O75154 756 aa12.25□□□□□ -0.45
ARHGEF3-201ENST00000296315 GUCY1B3Q02153 619 aa12.25□□□□□ -0.45
ARHGEF3-201ENST00000296315 NEK11Q8NG66 645 aa12.25□□□□□ -0.45
ARHGEF3-201ENST00000296315 DDX41Q9UJV9 622 aaKnown RBP12.25□□□□□ -0.45
ARHGEF3-201ENST00000296315 ZNF853P0CG23 659 aa12.25□□□□□ -0.45
ARHGEF3-201ENST00000296315 CCT4P50991 539 aaKnown RBP12.25□□□□□ -0.45
ARHGEF3-201ENST00000296315 ANAPC15P60006 121 aa12.25□□□□□ -0.45
ARHGEF3-201ENST00000296315 TERF2Q15554 542 aa12.25□□□□□ -0.45
ARHGEF3-201ENST00000296315 PTPN21Q16825 1174 aa12.25□□□□□ -0.45
ARHGEF3-201ENST00000296315 NOL10Q9BSC4 688 aaKnown RBP12.25□□□□□ -0.45
ARHGEF3-201ENST00000296315 NR1I2O75469 434 aa12.24□□□□□ -0.45
ARHGEF3-201ENST00000296315 SMC2O95347 1197 aa12.24□□□□□ -0.45
ARHGEF3-201ENST00000296315 ZKSCAN1P17029 563 aaPredicted RBP12.24□□□□□ -0.45
ARHGEF3-201ENST00000296315 HSPA4P34932 840 aa12.24□□□□□ -0.45
ARHGEF3-201ENST00000296315 BRPF1P55201 1214 aaPredicted RBP12.24□□□□□ -0.45
ARHGEF3-201ENST00000296315 PTH1RQ03431 593 aa12.24□□□□□ -0.45
ARHGEF3-201ENST00000296315 CNTROBQ8N137 903 aa12.24□□□□□ -0.45
ARHGEF3-201ENST00000296315 LRRC2Q9BYS8 371 aa12.24□□□□□ -0.45
ARHGEF3-201ENST00000296315 HSP90AB2PQ58FF8 381 aa12.24□□□□□ -0.45
ARHGEF3-201ENST00000296315 PPP1R42Q7Z4L9 355 aa12.24□□□□□ -0.45
ARHGEF3-201ENST00000296315 RIMS2Q9UQ26 1411 aa12.24□□□□□ -0.45
ARHGEF3-201ENST00000296315 MED14O60244 1454 aa12.24□□□□□ -0.45
ARHGEF3-201ENST00000296315 CCDC69A6NI79 296 aa12.24□□□□□ -0.45
ARHGEF3-201ENST00000296315 GNAI3P08754 354 aa12.24□□□□□ -0.45
ARHGEF3-201ENST00000296315 FLIIQ13045 1269 aa12.24□□□□□ -0.45
ARHGEF3-201ENST00000296315 ME3Q16798 604 aa12.24□□□□□ -0.45
ARHGEF3-201ENST00000296315 C14orf37Q86TY3 774 aa12.23□□□□□ -0.45
ARHGEF3-201ENST00000296315 TXNDC2Q86VQ3 553 aa12.23□□□□□ -0.45
ARHGEF3-201ENST00000296315 ZNF397Q8NF99 534 aaPredicted RBP12.23□□□□□ -0.45
ARHGEF3-201ENST00000296315 BIN1O00499 593 aa12.23□□□□□ -0.45
ARHGEF3-201ENST00000296315 NCBP3Q53F19 620 aaKnown RBP12.23□□□□□ -0.45
ARHGEF3-201ENST00000296315 SYT10Q6XYQ8 523 aa12.23□□□□□ -0.45
ARHGEF3-201ENST00000296315 RGS12O14924 1447 aa12.23□□□□□ -0.45
ARHGEF3-201ENST00000296315 ATP10DQ9P241 1426 aa12.23□□□□□ -0.45
ARHGEF3-201ENST00000296315 CTIFO43310 598 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms